EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022919 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 2731 bases
Position: chrHE594262.1:1156-3886
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054862	zf-C2H2	PF00096.26	2e-41	1	7
ENSTRUP00000054862	zf-C2H2	PF00096.26	2e-41	2	7
ENSTRUP00000054862	zf-C2H2	PF00096.26	2e-41	3	7
ENSTRUP00000054862	zf-C2H2	PF00096.26	2e-41	4	7
ENSTRUP00000054862	zf-C2H2	PF00096.26	2e-41	5	7
ENSTRUP00000054862	zf-C2H2	PF00096.26	2e-41	6	7
ENSTRUP00000054862	zf-C2H2	PF00096.26	2e-41	7	7
ENSTRUP00000054862	zf-met	PF12874.7	5.4e-17	1	2
ENSTRUP00000054862	zf-met	PF12874.7	5.4e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055034	-	1101	-	ENSTRUP00000054862	366 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000022919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022919	-	74	49.057	ENSTRUG00000020582	-	90	49.057
ENSTRUG00000022919	-	71	32.710	ENSTRUG00000001452	PRDM15	50	32.710
ENSTRUG00000022919	-	61	47.500	ENSTRUG00000000419	sna2	64	47.500
ENSTRUG00000022919	-	83	42.029	ENSTRUG00000022843	-	67	42.029
ENSTRUG00000022919	-	92	58.594	ENSTRUG00000020208	-	73	66.201
ENSTRUG00000022919	-	84	44.776	ENSTRUG00000022076	-	93	44.848
ENSTRUG00000022919	-	81	61.433	ENSTRUG00000007022	-	77	61.433
ENSTRUG00000022919	-	81	43.684	ENSTRUG00000005321	-	96	47.368
ENSTRUG00000022919	-	88	73.606	ENSTRUG00000022515	-	61	70.034
ENSTRUG00000022919	-	68	51.010	ENSTRUG00000019940	-	54	51.010
ENSTRUG00000022919	-	91	64.923	ENSTRUG00000000995	-	70	62.814
ENSTRUG00000022919	-	94	49.537	ENSTRUG00000019483	-	96	48.858
ENSTRUG00000022919	-	97	65.084	ENSTRUG00000001268	-	91	64.103
ENSTRUG00000022919	-	81	34.862	ENSTRUG00000006180	si:ch211-216l23.1	80	33.333
ENSTRUG00000022919	-	82	64.865	ENSTRUG00000003111	-	85	64.865
ENSTRUG00000022919	-	84	45.794	ENSTRUG00000017456	znf236	69	45.794
ENSTRUG00000022919	-	67	47.134	ENSTRUG00000023491	-	66	47.134
ENSTRUG00000022919	-	80	50.311	ENSTRUG00000003454	-	67	43.077
ENSTRUG00000022919	-	72	39.815	ENSTRUG00000020495	si:dkey-89b17.4	77	37.097
ENSTRUG00000022919	-	85	68.142	ENSTRUG00000013906	-	93	68.142
ENSTRUG00000022919	-	64	38.462	ENSTRUG00000024008	-	69	33.918
ENSTRUG00000022919	-	72	42.017	ENSTRUG00000022066	-	92	42.487
ENSTRUG00000022919	-	69	37.895	ENSTRUG00000025597	znf646	77	39.683
ENSTRUG00000022919	-	75	43.850	ENSTRUG00000019685	znf319b	85	43.850
ENSTRUG00000022919	-	85	43.005	ENSTRUG00000005880	-	63	43.005
ENSTRUG00000022919	-	87	36.979	ENSTRUG00000014476	-	83	36.979
ENSTRUG00000022919	-	76	67.196	ENSTRUG00000005180	-	83	67.196
ENSTRUG00000022919	-	79	32.278	ENSTRUG00000019941	-	57	32.278
ENSTRUG00000022919	-	69	69.912	ENSTRUG00000025189	-	68	69.912
ENSTRUG00000022919	-	83	77.815	ENSTRUG00000023925	-	69	77.815
ENSTRUG00000022919	-	60	37.220	ENSTRUG00000005241	gtf3ab	82	37.220
ENSTRUG00000022919	-	76	46.753	ENSTRUG00000024073	-	62	46.753
ENSTRUG00000022919	-	84	39.044	ENSTRUG00000012157	-	87	39.669
ENSTRUG00000022919	-	60	38.028	ENSTRUG00000011637	scrt1b	51	38.028
ENSTRUG00000022919	-	94	62.536	ENSTRUG00000022206	-	64	62.536
ENSTRUG00000022919	-	94	67.010	ENSTRUG00000021765	-	67	67.010
ENSTRUG00000022919	-	80	38.865	ENSTRUG00000025881	-	68	44.037
ENSTRUG00000022919	-	89	50.739	ENSTRUG00000006896	-	85	45.693
ENSTRUG00000022919	-	83	43.137	ENSTRUG00000011385	znf341	55	43.137
ENSTRUG00000022919	-	63	41.121	ENSTRUG00000025588	snai2	79	38.806
ENSTRUG00000022919	-	77	43.119	ENSTRUG00000021675	-	78	43.119
ENSTRUG00000022919	-	67	46.324	ENSTRUG00000004525	gfi1b	56	46.324
ENSTRUG00000022919	-	89	43.396	ENSTRUG00000015687	-	92	44.601
ENSTRUG00000022919	-	88	39.048	ENSTRUG00000009203	zbtb41	57	39.048
ENSTRUG00000022919	-	78	54.709	ENSTRUG00000012273	-	76	54.709
ENSTRUG00000022919	-	76	43.787	ENSTRUG00000013850	prdm5	72	43.787
ENSTRUG00000022919	-	63	50.820	ENSTRUG00000022969	-	72	50.820
ENSTRUG00000022919	-	80	41.150	ENSTRUG00000003277	zbtb17	90	50.000
ENSTRUG00000022919	-	61	32.967	ENSTRUG00000016621	hinfp	54	32.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022919	-	63	52.427	ENSAPOG00000005767	-	100	52.427	Acanthochromis_polyacanthus
ENSTRUG00000022919	-	78	52.764	ENSAOCG00000000570	-	74	52.764	Amphiprion_ocellaris
ENSTRUG00000022919	-	64	50.000	ENSAPEG00000018796	-	79	50.000	Amphiprion_percula
ENSTRUG00000022919	-	79	37.165	ENSCVAG00000018507	-	74	38.462	Cyprinodon_variegatus
ENSTRUG00000022919	-	76	36.306	ENSFHEG00000022534	-	79	41.753	Fundulus_heteroclitus
ENSTRUG00000022919	-	77	49.541	ENSKMAG00000013745	-	59	49.541	Kryptolebias_marmoratus
ENSTRUG00000022919	-	90	55.510	ENSMAMG00000018114	-	91	52.889	Mastacembelus_armatus
ENSTRUG00000022919	-	77	42.609	ENSMAMG00000009817	-	71	48.438	Mastacembelus_armatus
ENSTRUG00000022919	-	79	53.271	ENSMZEG00005016808	-	87	53.271	Maylandia_zebra
ENSTRUG00000022919	-	87	48.464	ENSMALG00000001085	-	99	48.464	Monopterus_albus
ENSTRUG00000022919	-	96	58.257	ENSMALG00000004579	-	93	58.788	Monopterus_albus
ENSTRUG00000022919	-	80	54.054	ENSMALG00000008930	-	79	44.361	Monopterus_albus
ENSTRUG00000022919	-	79	59.296	ENSMALG00000012116	-	99	59.296	Monopterus_albus
ENSTRUG00000022919	-	61	56.410	ENSMALG00000012757	-	68	56.410	Monopterus_albus
ENSTRUG00000022919	-	76	53.012	ENSNBRG00000013501	-	78	53.012	Neolamprologus_brichardi
ENSTRUG00000022919	-	78	44.898	ENSOMEG00000021420	-	63	44.898	Oryzias_melastigma
ENSTRUG00000022919	-	65	38.660	ENSPREG00000014898	-	64	38.660	Poecilia_reticulata
ENSTRUG00000022919	-	78	45.270	ENSPNYG00000007756	-	77	48.000	Pundamilia_nyererei
ENSTRUG00000022919	-	67	49.457	ENSSDUG00000001263	-	84	50.000	Seriola_dumerili
ENSTRUG00000022919	-	75	41.704	ENSSLDG00000023661	-	98	39.855	Seriola_lalandi_dorsalis
ENSTRUG00000022919	-	77	52.838	ENSTNIG00000005856	-	99	52.838	Tetraodon_nigroviridis
ENSTRUG00000022919	-	68	53.642	ENSXCOG00000019492	-	93	48.529	Xiphophorus_couchianus
ENSTRUG00000022919	-	72	51.185	ENSXMAG00000022297	-	100	51.185	Xiphophorus_maculatus