EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000022969 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2044 bases
Position: chr7:10418331-10420374
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054541	zf-C2H2	PF00096.26	1.2e-16	1	3
ENSTRUP00000054541	zf-C2H2	PF00096.26	1.2e-16	2	3
ENSTRUP00000054541	zf-C2H2	PF00096.26	1.2e-16	3	3
ENSTRUP00000054541	zf-met	PF12874.7	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052110	-	393	-	ENSTRUP00000054541	130 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000022969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000022969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000022969	-	66	49.153	ENSTRUG00000012157	-	58	49.153
ENSTRUG00000022969	-	72	50.820	ENSTRUG00000022919	-	63	50.820
ENSTRUG00000022969	-	66	48.529	ENSTRUG00000022076	-	79	44.186
ENSTRUG00000022969	-	72	50.000	ENSTRUG00000005321	-	88	50.000
ENSTRUG00000022969	-	81	44.068	ENSTRUG00000006896	-	83	44.068
ENSTRUG00000022969	-	74	53.333	ENSTRUG00000013906	-	90	53.333
ENSTRUG00000022969	-	65	44.262	ENSTRUG00000022990	sna1	50	38.889
ENSTRUG00000022969	-	66	52.542	ENSTRUG00000012273	-	72	52.542
ENSTRUG00000022969	-	73	42.857	ENSTRUG00000013850	prdm5	50	42.857
ENSTRUG00000022969	-	66	40.476	ENSTRUG00000023491	-	59	45.614
ENSTRUG00000022969	-	72	57.895	ENSTRUG00000001268	-	95	52.542
ENSTRUG00000022969	-	66	44.068	ENSTRUG00000019685	znf319b	57	44.068
ENSTRUG00000022969	-	65	52.778	ENSTRUG00000020208	-	50	42.353
ENSTRUG00000022969	-	66	47.619	ENSTRUG00000021675	-	51	47.619
ENSTRUG00000022969	-	98	57.895	ENSTRUG00000003111	-	90	57.895
ENSTRUG00000022969	-	65	44.706	ENSTRUG00000020582	-	91	43.529
ENSTRUG00000022969	-	75	54.545	ENSTRUG00000005180	-	85	54.545
ENSTRUG00000022969	-	68	49.153	ENSTRUG00000022066	-	85	46.032
ENSTRUG00000022969	-	65	46.914	ENSTRUG00000025189	-	68	45.977
ENSTRUG00000022969	-	73	38.889	ENSTRUG00000000419	sna2	53	38.889
ENSTRUG00000022969	-	72	45.349	ENSTRUG00000024073	-	62	45.349
ENSTRUG00000022969	-	90	48.235	ENSTRUG00000019483	-	87	48.235
ENSTRUG00000022969	-	73	51.064	ENSTRUG00000003277	zbtb17	92	51.064
ENSTRUG00000022969	-	95	45.763	ENSTRUG00000015687	-	93	48.649
ENSTRUG00000022969	-	65	40.541	ENSTRUG00000025588	snai2	50	40.541
ENSTRUG00000022969	-	72	55.932	ENSTRUG00000000995	-	70	55.932
ENSTRUG00000022969	-	66	53.333	ENSTRUG00000007022	-	63	53.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000022969	-	66	57.627	ENSDARG00000100001	znf1096	78	57.627	Danio_rerio
ENSTRUG00000022969	-	67	62.500	ENSDARG00000089715	si:cabz01054394.7	65	62.500	Danio_rerio
ENSTRUG00000022969	-	67	57.377	ENSDARG00000115655	znf1078	70	57.377	Danio_rerio
ENSTRUG00000022969	-	67	57.377	ENSDARG00000098196	znf1077	70	57.377	Danio_rerio
ENSTRUG00000022969	-	65	50.602	ENSDARG00000110229	zgc:173702	77	50.602	Danio_rerio
ENSTRUG00000022969	-	67	57.377	ENSDARG00000098430	znf1078	70	57.377	Danio_rerio
ENSTRUG00000022969	-	67	57.377	ENSDARG00000101327	znf1076	70	57.377	Danio_rerio
ENSTRUG00000022969	-	66	50.704	ENSDARG00000103244	CABZ01081752.3	79	50.704	Danio_rerio
ENSTRUG00000022969	-	97	49.412	ENSDARG00000091393	si:ch211-161m3.6	72	49.412	Danio_rerio
ENSTRUG00000022969	-	65	48.235	ENSDARG00000098087	si:dkey-30f3.2	72	48.235	Danio_rerio
ENSTRUG00000022969	-	65	56.667	ENSDARG00000104407	BX649453.1	79	56.667	Danio_rerio
ENSTRUG00000022969	-	65	47.170	ENSDARG00000103495	zgc:173714	75	47.170	Danio_rerio
ENSTRUG00000022969	-	67	51.667	ENSDARG00000116177	znf1127	80	51.667	Danio_rerio
ENSTRUG00000022969	-	65	48.235	ENSDARG00000114437	zgc:173705	69	48.235	Danio_rerio
ENSTRUG00000022969	-	67	57.377	ENSDARG00000099736	CABZ01075078.1	70	57.377	Danio_rerio
ENSTRUG00000022969	-	67	57.377	ENSDARG00000095605	CR846087.3	76	57.377	Danio_rerio
ENSTRUG00000022969	-	66	47.368	ENSFHEG00000021020	-	63	47.368	Fundulus_heteroclitus
ENSTRUG00000022969	-	66	88.235	ENSGMOG00000020024	-	97	88.235	Gadus_morhua
ENSTRUG00000022969	-	98	47.458	ENSKMAG00000011441	-	58	47.458	Kryptolebias_marmoratus
ENSTRUG00000022969	-	66	45.349	ENSPFOG00000003366	-	70	45.349	Poecilia_formosa
ENSTRUG00000022969	-	68	45.714	ENSPFOG00000022423	-	77	45.714	Poecilia_formosa
ENSTRUG00000022969	-	71	44.595	ENSPREG00000005015	-	88	44.595	Poecilia_reticulata
ENSTRUG00000022969	-	65	53.333	ENSXETG00000031310	-	60	51.190	Xenopus_tropicalis
ENSTRUG00000022969	-	64	91.566	ENSXCOG00000015435	-	81	91.566	Xiphophorus_couchianus
ENSTRUG00000022969	-	66	54.098	ENSXCOG00000003499	-	52	54.098	Xiphophorus_couchianus