EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000023094 (Gene tree)
Gene ID: 101068957
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4122 bases
Position: chrHE593950.1:3741-7862
Accession: 101068957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053225	LSM	PF01423.22	5.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000050063	-	1627	XM_003979566	ENSTRUP00000053225	229 (aa)	XP_003979615	UPI0005D28690

Gene Model

Click here to download ENSTRUG00000023094's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023094	snrpb	72	94.048	ENSG00000125835	SNRPB	74	98.077	Homo_sapiens
ENSTRUG00000023094	snrpb	99	98.684	ENSAPOG00000019606	snrpb	78	98.684	Acanthochromis_polyacanthus
ENSTRUG00000023094	snrpb	72	94.012	ENSAMEG00000011353	SNRPB	75	91.758	Ailuropoda_melanoleuca
ENSTRUG00000023094	snrpb	97	97.768	ENSACIG00000014480	snrpb	99	97.768	Amphilophus_citrinellus
ENSTRUG00000023094	snrpb	99	98.684	ENSAOCG00000006876	snrpb	95	98.684	Amphiprion_ocellaris
ENSTRUG00000023094	snrpb	99	98.684	ENSAPEG00000021585	snrpb	99	97.826	Amphiprion_percula
ENSTRUG00000023094	snrpb	99	97.807	ENSATEG00000009836	snrpb	95	97.807	Anabas_testudineus
ENSTRUG00000023094	snrpb	69	95.000	ENSACAG00000002053	SNRPB	75	91.954	Anolis_carolinensis
ENSTRUG00000023094	snrpb	93	86.047	ENSANAG00000036271	-	74	84.699	Aotus_nancymaae
ENSTRUG00000023094	snrpb	72	94.048	ENSANAG00000024443	-	79	91.803	Aotus_nancymaae
ENSTRUG00000023094	snrpb	99	98.684	ENSACLG00000014707	snrpb	95	98.684	Astatotilapia_calliptera
ENSTRUG00000023094	snrpb	99	98.238	ENSAMXG00000029434	snrpb	96	98.238	Astyanax_mexicanus
ENSTRUG00000023094	snrpb	89	85.577	ENSBTAG00000001038	SNRPB	79	91.803	Bos_taurus
ENSTRUG00000023094	snrpb	72	94.048	ENSCJAG00000020971	-	79	91.803	Callithrix_jacchus
ENSTRUG00000023094	snrpb	92	84.579	ENSCJAG00000023097	-	76	84.699	Callithrix_jacchus
ENSTRUG00000023094	snrpb	72	94.048	ENSCAFG00000006693	-	79	91.803	Canis_familiaris
ENSTRUG00000023094	snrpb	63	84.247	ENSCAFG00000031109	-	76	80.328	Canis_familiaris
ENSTRUG00000023094	snrpb	72	94.048	ENSCAFG00020016981	-	76	91.803	Canis_lupus_dingo
ENSTRUG00000023094	snrpb	72	94.048	ENSCHIG00000025449	-	79	91.803	Capra_hircus
ENSTRUG00000023094	snrpb	72	94.048	ENSTSYG00000014498	-	79	91.803	Carlito_syrichta
ENSTRUG00000023094	snrpb	97	75.336	ENSTSYG00000032303	-	66	72.928	Carlito_syrichta
ENSTRUG00000023094	snrpb	72	94.012	ENSCAPG00000012669	SNRPB	79	91.758	Cavia_aperea
ENSTRUG00000023094	snrpb	72	94.048	ENSCPOG00000039408	SNRPB	79	91.803	Cavia_porcellus
ENSTRUG00000023094	snrpb	72	94.048	ENSCCAG00000026002	SNRPB	79	91.803	Cebus_capucinus
ENSTRUG00000023094	snrpb	55	83.465	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSTRUG00000023094	snrpb	72	94.048	ENSCATG00000030230	SNRPB	79	91.803	Cercocebus_atys
ENSTRUG00000023094	snrpb	72	94.048	ENSCLAG00000012442	SNRPB	77	91.803	Chinchilla_lanigera
ENSTRUG00000023094	snrpb	72	94.048	ENSCSAG00000010840	SNRPB	79	91.803	Chlorocebus_sabaeus
ENSTRUG00000023094	snrpb	99	95.633	ENSCPBG00000026801	SNRPB	99	95.633	Chrysemys_picta_bellii
ENSTRUG00000023094	snrpb	72	94.048	ENSCANG00000019461	SNRPB	79	91.803	Colobus_angolensis_palliatus
ENSTRUG00000023094	snrpb	72	94.048	ENSCGRG00001023046	Snrpb	79	91.803	Cricetulus_griseus_chok1gshd
ENSTRUG00000023094	snrpb	70	93.865	ENSCGRG00000010423	Snrpb	78	91.429	Cricetulus_griseus_crigri
ENSTRUG00000023094	snrpb	99	98.673	ENSCSEG00000020328	snrpb	95	98.673	Cynoglossus_semilaevis
ENSTRUG00000023094	snrpb	99	97.797	ENSDARG00000011125	snrpb	95	97.797	Danio_rerio
ENSTRUG00000023094	snrpb	72	88.095	ENSDNOG00000007896	-	75	86.339	Dasypus_novemcinctus
ENSTRUG00000023094	snrpb	72	94.048	ENSDNOG00000015545	-	76	91.803	Dasypus_novemcinctus
ENSTRUG00000023094	snrpb	70	93.827	ENSDORG00000029558	Snrpb	77	91.525	Dipodomys_ordii
ENSTRUG00000023094	snrpb	80	62.437	FBgn0262601	SmB	73	69.388	Drosophila_melanogaster
ENSTRUG00000023094	snrpb	72	73.214	ENSETEG00000006830	SNRPB	80	72.678	Echinops_telfairi
ENSTRUG00000023094	snrpb	80	79.235	ENSEBUG00000007467	SNRPB	62	88.435	Eptatretus_burgeri
ENSTRUG00000023094	snrpb	72	93.452	ENSEASG00005012991	SNRPB	79	91.257	Equus_asinus_asinus
ENSTRUG00000023094	snrpb	72	94.048	ENSECAG00000011944	SNRPB	79	91.803	Equus_caballus
ENSTRUG00000023094	snrpb	72	94.048	ENSEEUG00000015568	SNRPB	64	91.803	Erinaceus_europaeus
ENSTRUG00000023094	snrpb	99	98.230	ENSELUG00000014564	snrpb	98	98.182	Esox_lucius
ENSTRUG00000023094	snrpb	72	94.048	ENSFCAG00000034090	-	79	91.803	Felis_catus
ENSTRUG00000023094	snrpb	95	95.023	ENSFALG00000004866	SNRPB	95	95.023	Ficedula_albicollis
ENSTRUG00000023094	snrpb	72	94.048	ENSFDAG00000009937	SNRPB	79	91.803	Fukomys_damarensis
ENSTRUG00000023094	snrpb	99	95.197	ENSGALG00000035421	SNRPN	95	95.197	Gallus_gallus
ENSTRUG00000023094	snrpb	98	96.903	ENSGAFG00000019558	snrpb	99	96.903	Gambusia_affinis
ENSTRUG00000023094	snrpb	99	98.673	ENSGACG00000003262	snrpb	95	98.673	Gasterosteus_aculeatus
ENSTRUG00000023094	snrpb	99	95.633	ENSGAGG00000001308	SNRPB	95	95.633	Gopherus_agassizii
ENSTRUG00000023094	snrpb	72	94.048	ENSGGOG00000016138	SNRPB	79	91.803	Gorilla_gorilla
ENSTRUG00000023094	snrpb	99	98.684	ENSHBUG00000008369	snrpb	95	98.684	Haplochromis_burtoni
ENSTRUG00000023094	snrpb	66	86.000	ENSHGLG00000016505	-	86	81.667	Heterocephalus_glaber_female
ENSTRUG00000023094	snrpb	72	94.048	ENSHGLG00000016241	-	79	91.803	Heterocephalus_glaber_female
ENSTRUG00000023094	snrpb	66	86.000	ENSHGLG00100004178	-	86	81.667	Heterocephalus_glaber_male
ENSTRUG00000023094	snrpb	72	94.048	ENSHGLG00100012877	-	79	91.803	Heterocephalus_glaber_male
ENSTRUG00000023094	snrpb	99	99.558	ENSHCOG00000014888	snrpb	95	99.558	Hippocampus_comes
ENSTRUG00000023094	snrpb	99	97.797	ENSIPUG00000024569	SNRPB	95	97.797	Ictalurus_punctatus
ENSTRUG00000023094	snrpb	93	78.404	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSTRUG00000023094	snrpb	72	92.262	ENSSTOG00000033664	-	76	90.164	Ictidomys_tridecemlineatus
ENSTRUG00000023094	snrpb	72	94.048	ENSJJAG00000024170	Snrpb	79	91.803	Jaculus_jaculus
ENSTRUG00000023094	snrpb	99	96.522	ENSKMAG00000014494	snrpb	94	96.522	Kryptolebias_marmoratus
ENSTRUG00000023094	snrpb	99	99.558	ENSLBEG00000005678	snrpb	95	99.558	Labrus_bergylta
ENSTRUG00000023094	snrpb	99	94.760	ENSLACG00000011459	SNRPB	95	94.760	Latimeria_chalumnae
ENSTRUG00000023094	snrpb	99	98.238	ENSLOCG00000002687	snrpb	95	98.238	Lepisosteus_oculatus
ENSTRUG00000023094	snrpb	72	89.820	ENSLAFG00000017588	SNRPB	78	87.912	Loxodonta_africana
ENSTRUG00000023094	snrpb	72	94.048	ENSMFAG00000038756	SNRPB	79	91.803	Macaca_fascicularis
ENSTRUG00000023094	snrpb	72	94.048	ENSMMUG00000010050	SNRPB	79	91.803	Macaca_mulatta
ENSTRUG00000023094	snrpb	72	94.048	ENSMNEG00000027954	SNRPB	79	91.803	Macaca_nemestrina
ENSTRUG00000023094	snrpb	72	94.048	ENSMLEG00000022346	SNRPB	79	91.803	Mandrillus_leucophaeus
ENSTRUG00000023094	snrpb	98	98.678	ENSMAMG00000009294	snrpb	92	98.678	Mastacembelus_armatus
ENSTRUG00000023094	snrpb	99	98.684	ENSMZEG00005011856	snrpb	95	98.684	Maylandia_zebra
ENSTRUG00000023094	snrpb	78	83.425	ENSMICG00000015983	-	84	81.967	Microcebus_murinus
ENSTRUG00000023094	snrpb	72	94.048	ENSMICG00000016519	SNRPB	79	91.803	Microcebus_murinus
ENSTRUG00000023094	snrpb	61	78.417	ENSMOCG00000021362	-	76	74.586	Microtus_ochrogaster
ENSTRUG00000023094	snrpb	72	93.452	ENSMOCG00000002892	-	79	91.257	Microtus_ochrogaster
ENSTRUG00000023094	snrpb	99	98.678	ENSMMOG00000013226	snrpb	97	98.678	Mola_mola
ENSTRUG00000023094	snrpb	99	97.807	ENSMALG00000020839	snrpb	77	97.807	Monopterus_albus
ENSTRUG00000023094	snrpb	72	94.048	MGP_CAROLIEiJ_G0024293	Snrpb	74	98.077	Mus_caroli
ENSTRUG00000023094	snrpb	72	94.048	ENSMUSG00000027404	Snrpb	74	98.077	Mus_musculus
ENSTRUG00000023094	snrpb	72	94.048	MGP_PahariEiJ_G0025738	Snrpb	74	98.077	Mus_pahari
ENSTRUG00000023094	snrpb	72	94.048	MGP_SPRETEiJ_G0025213	Snrpb	73	98.077	Mus_spretus
ENSTRUG00000023094	snrpb	72	94.048	ENSMPUG00000009283	SNRPB	79	91.803	Mustela_putorius_furo
ENSTRUG00000023094	snrpb	72	90.476	ENSMLUG00000016951	SNRPB	76	88.525	Myotis_lucifugus
ENSTRUG00000023094	snrpb	72	94.048	ENSNGAG00000012051	Snrpb	79	91.803	Nannospalax_galili
ENSTRUG00000023094	snrpb	99	96.491	ENSNBRG00000006353	snrpb	87	96.491	Neolamprologus_brichardi
ENSTRUG00000023094	snrpb	72	94.048	ENSNLEG00000029067	SNRPB	77	91.758	Nomascus_leucogenys
ENSTRUG00000023094	snrpb	72	94.012	ENSMEUG00000015625	SNRPB	81	91.758	Notamacropus_eugenii
ENSTRUG00000023094	snrpb	72	88.690	ENSODEG00000016060	-	77	86.885	Octodon_degus
ENSTRUG00000023094	snrpb	72	94.048	ENSODEG00000004305	-	79	91.803	Octodon_degus
ENSTRUG00000023094	snrpb	99	98.684	ENSONIG00000000248	snrpb	95	98.684	Oreochromis_niloticus
ENSTRUG00000023094	snrpb	93	87.907	ENSOCUG00000021456	-	76	87.978	Oryctolagus_cuniculus
ENSTRUG00000023094	snrpb	72	94.048	ENSOCUG00000014042	-	76	91.803	Oryctolagus_cuniculus
ENSTRUG00000023094	snrpb	77	88.268	ENSOCUG00000022423	-	92	86.592	Oryctolagus_cuniculus
ENSTRUG00000023094	snrpb	92	65.094	ENSOCUG00000026813	-	78	63.889	Oryctolagus_cuniculus
ENSTRUG00000023094	snrpb	92	89.671	ENSOCUG00000028215	-	76	89.617	Oryctolagus_cuniculus
ENSTRUG00000023094	snrpb	99	97.807	ENSORLG00000021862	snrpb	95	97.807	Oryzias_latipes
ENSTRUG00000023094	snrpb	72	94.048	ENSOGAG00000016149	SNRPB	76	91.803	Otolemur_garnettii
ENSTRUG00000023094	snrpb	72	94.048	ENSOARG00000006740	SNRPB	79	91.803	Ovis_aries
ENSTRUG00000023094	snrpb	72	94.048	ENSPPAG00000036314	SNRPB	79	91.803	Pan_paniscus
ENSTRUG00000023094	snrpb	72	94.048	ENSPPRG00000003233	-	79	91.803	Panthera_pardus
ENSTRUG00000023094	snrpb	72	94.012	ENSPTIG00000007468	SNRPB	79	91.758	Panthera_tigris_altaica
ENSTRUG00000023094	snrpb	72	94.048	ENSPTRG00000013176	SNRPB	79	91.803	Pan_troglodytes
ENSTRUG00000023094	snrpb	72	94.048	ENSPANG00000020362	SNRPB	76	91.803	Papio_anubis
ENSTRUG00000023094	snrpb	99	96.916	ENSPKIG00000002865	snrpb	95	96.916	Paramormyrops_kingsleyae
ENSTRUG00000023094	snrpb	98	95.614	ENSPSIG00000014125	SNRPB	94	95.614	Pelodiscus_sinensis
ENSTRUG00000023094	snrpb	97	97.285	ENSPMGG00000016349	snrpb	94	97.285	Periophthalmus_magnuspinnatus
ENSTRUG00000023094	snrpb	72	94.048	ENSPEMG00000007948	Snrpb	79	91.803	Peromyscus_maniculatus_bairdii
ENSTRUG00000023094	snrpb	72	93.413	ENSPCIG00000004694	SNRPB	76	91.209	Phascolarctos_cinereus
ENSTRUG00000023094	snrpb	65	100.000	ENSPFOG00000011802	snrpb	62	100.000	Poecilia_formosa
ENSTRUG00000023094	snrpb	82	78.756	ENSPLAG00000014130	snrpb	59	100.000	Poecilia_latipinna
ENSTRUG00000023094	snrpb	82	80.749	ENSPREG00000015515	snrpb	62	100.000	Poecilia_reticulata
ENSTRUG00000023094	snrpb	72	94.048	ENSPPYG00000010841	SNRPB	79	91.803	Pongo_abelii
ENSTRUG00000023094	snrpb	72	94.048	ENSPCOG00000013686	SNRPB	79	91.803	Propithecus_coquereli
ENSTRUG00000023094	snrpb	72	92.857	ENSPVAG00000017013	SNRPB	64	90.710	Pteropus_vampyrus
ENSTRUG00000023094	snrpb	99	98.684	ENSPNYG00000014788	snrpb	95	98.684	Pundamilia_nyererei
ENSTRUG00000023094	snrpb	99	97.797	ENSPNAG00000016126	snrpb	95	97.797	Pygocentrus_nattereri
ENSTRUG00000023094	snrpb	72	94.048	ENSRNOG00000006961	Snrpb	73	98.077	Rattus_norvegicus
ENSTRUG00000023094	snrpb	72	94.048	ENSRBIG00000040505	SNRPB	79	92.308	Rhinopithecus_bieti
ENSTRUG00000023094	snrpb	72	94.048	ENSRROG00000036094	SNRPB	79	91.803	Rhinopithecus_roxellana
ENSTRUG00000023094	snrpb	72	94.048	ENSSBOG00000027310	SNRPB	79	91.803	Saimiri_boliviensis_boliviensis
ENSTRUG00000023094	snrpb	99	94.760	ENSSHAG00000010394	SNRPB	95	94.760	Sarcophilus_harrisii
ENSTRUG00000023094	snrpb	99	96.476	ENSSFOG00015002870	snrpb	95	96.476	Scleropages_formosus
ENSTRUG00000023094	snrpb	99	99.558	ENSSMAG00000006766	snrpb	95	99.558	Scophthalmus_maximus
ENSTRUG00000023094	snrpb	99	98.684	ENSSDUG00000018539	snrpb	95	98.684	Seriola_dumerili
ENSTRUG00000023094	snrpb	99	98.684	ENSSLDG00000022391	snrpb	95	98.684	Seriola_lalandi_dorsalis
ENSTRUG00000023094	snrpb	72	78.443	ENSSARG00000003084	SNRPB	78	77.473	Sorex_araneus
ENSTRUG00000023094	snrpb	98	95.614	ENSSPUG00000015659	SNRPB	95	95.614	Sphenodon_punctatus
ENSTRUG00000023094	snrpb	99	98.684	ENSSPAG00000021992	snrpb	95	98.684	Stegastes_partitus
ENSTRUG00000023094	snrpb	99	72.294	ENSSSCG00000011966	-	77	69.399	Sus_scrofa
ENSTRUG00000023094	snrpb	72	94.048	ENSSSCG00000040857	-	79	91.803	Sus_scrofa
ENSTRUG00000023094	snrpb	61	97.143	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSTRUG00000023094	snrpb	99	100.000	ENSTNIG00000002991	snrpb	95	100.000	Tetraodon_nigroviridis
ENSTRUG00000023094	snrpb	72	94.048	ENSUAMG00000005984	-	88	91.803	Ursus_americanus
ENSTRUG00000023094	snrpb	93	78.037	ENSUMAG00000002123	-	63	94.891	Ursus_maritimus
ENSTRUG00000023094	snrpb	97	74.890	ENSVVUG00000010086	-	78	74.176	Vulpes_vulpes
ENSTRUG00000023094	snrpb	72	93.452	ENSVVUG00000025654	-	76	91.257	Vulpes_vulpes
ENSTRUG00000023094	snrpb	66	98.000	ENSXETG00000027266	snrpb	77	92.350	Xenopus_tropicalis
ENSTRUG00000023094	snrpb	73	82.456	ENSXMAG00000028767	snrpb	58	100.000	Xiphophorus_maculatus