EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000023354 (Gene tree)
Gene ID: 105416731
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 853-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 1493 bases
Position: chr7:13593502-13594994
Accession: 105416731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052109	zf-C2H2	PF00096.26	5.5e-16	1	3
ENSTRUP00000052109	zf-C2H2	PF00096.26	5.5e-16	2	3
ENSTRUP00000052109	zf-C2H2	PF00096.26	5.5e-16	3	3
ENSTRUP00000052109	zf-met	PF12874.7	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054758	-	1391	XM_011605900	ENSTRUP00000052109	286 (aa)	XP_011604202	UPI0005D2BBC1

Gene Model

Click here to download ENSTRUG00000023354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000023354	-	97	40.741	ENSTRUG00000021167	-	96	40.741
ENSTRUG00000023354	-	65	48.837	ENSTRUG00000012273	-	72	48.837
ENSTRUG00000023354	-	56	44.318	ENSTRUG00000006896	-	95	45.349
ENSTRUG00000023354	-	51	49.383	ENSTRUG00000021675	-	54	49.383
ENSTRUG00000023354	-	98	42.529	ENSTRUG00000020582	-	99	42.529
ENSTRUG00000023354	-	57	50.980	ENSTRUG00000015687	-	90	50.980
ENSTRUG00000023354	-	98	45.763	ENSTRUG00000003454	-	51	45.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023354	-	98	38.636	ENSAPOG00000021966	-	98	39.241	Acanthochromis_polyacanthus
ENSTRUG00000023354	-	97	38.889	ENSAOCG00000001971	-	96	38.889	Amphiprion_ocellaris
ENSTRUG00000023354	-	98	37.931	ENSAOCG00000022529	-	98	40.506	Amphiprion_ocellaris
ENSTRUG00000023354	-	96	38.889	ENSAPEG00000011156	-	82	38.889	Amphiprion_percula
ENSTRUG00000023354	-	99	59.298	ENSATEG00000021056	-	99	59.298	Anabas_testudineus
ENSTRUG00000023354	-	66	83.516	ENSCSEG00000019848	-	80	83.516	Cynoglossus_semilaevis
ENSTRUG00000023354	-	55	56.522	ENSKMAG00000017903	-	51	56.522	Kryptolebias_marmoratus
ENSTRUG00000023354	-	100	53.595	ENSKMAG00000008200	-	100	55.375	Kryptolebias_marmoratus
ENSTRUG00000023354	-	59	63.529	ENSORLG00000012581	-	75	64.242	Oryzias_latipes
ENSTRUG00000023354	-	53	40.000	ENSPLAG00000005106	-	91	40.000	Poecilia_latipinna
ENSTRUG00000023354	-	98	42.857	ENSSMAG00000006902	-	98	42.857	Scophthalmus_maximus
ENSTRUG00000023354	-	96	48.750	ENSSMAG00000006155	-	95	48.750	Scophthalmus_maximus
ENSTRUG00000023354	-	57	45.882	ENSSDUG00000023765	-	91	45.882	Seriola_dumerili