EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000023491 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4738 bases
Position: chr13:3251403-3256140
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000048477	zf-C2H2	PF00096.26	2.7e-35	1	6
ENSTRUP00000048477	zf-C2H2	PF00096.26	2.7e-35	2	6
ENSTRUP00000048477	zf-C2H2	PF00096.26	2.7e-35	3	6
ENSTRUP00000048477	zf-C2H2	PF00096.26	2.7e-35	4	6
ENSTRUP00000048477	zf-C2H2	PF00096.26	2.7e-35	5	6
ENSTRUP00000048477	zf-C2H2	PF00096.26	2.7e-35	6	6
ENSTRUP00000048477	zf-met	PF12874.7	4.3e-10	1	2
ENSTRUP00000048477	zf-met	PF12874.7	4.3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000050705	-	879	-	ENSTRUP00000048477	292 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000023491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000023491	-	60	36.782	ENSTRUG00000022843	-	64	38.824
ENSTRUG00000023491	-	70	35.606	ENSTRUG00000011637	scrt1b	68	35.606
ENSTRUG00000023491	-	75	39.130	ENSTRUG00000022066	-	92	39.130
ENSTRUG00000023491	-	60	35.714	ENSTRUG00000005241	gtf3ab	56	35.714
ENSTRUG00000023491	-	70	37.671	ENSTRUG00000019685	znf319b	89	37.681
ENSTRUG00000023491	-	97	46.784	ENSTRUG00000021765	-	79	46.784
ENSTRUG00000023491	-	97	46.584	ENSTRUG00000020208	-	86	40.972
ENSTRUG00000023491	-	74	43.976	ENSTRUG00000001268	-	93	43.275
ENSTRUG00000023491	-	65	47.482	ENSTRUG00000003454	-	66	47.482
ENSTRUG00000023491	-	66	41.284	ENSTRUG00000020495	si:dkey-89b17.4	57	41.284
ENSTRUG00000023491	-	66	47.134	ENSTRUG00000022919	-	67	47.134
ENSTRUG00000023491	-	94	40.187	ENSTRUG00000022206	-	73	40.187
ENSTRUG00000023491	-	55	41.509	ENSTRUG00000022990	sna1	66	41.509
ENSTRUG00000023491	-	59	41.718	ENSTRUG00000005880	-	53	41.718
ENSTRUG00000023491	-	59	45.614	ENSTRUG00000022969	-	66	40.476
ENSTRUG00000023491	-	64	46.386	ENSTRUG00000021675	-	80	45.614
ENSTRUG00000023491	-	63	45.070	ENSTRUG00000022515	-	51	45.070
ENSTRUG00000023491	-	62	43.396	ENSTRUG00000025588	snai2	68	43.396
ENSTRUG00000023491	-	77	39.286	ENSTRUG00000006180	si:ch211-216l23.1	59	38.596
ENSTRUG00000023491	-	57	46.789	ENSTRUG00000025189	-	61	46.789
ENSTRUG00000023491	-	65	47.126	ENSTRUG00000017456	znf236	62	47.126
ENSTRUG00000023491	-	65	44.578	ENSTRUG00000024073	-	70	44.578
ENSTRUG00000023491	-	97	43.030	ENSTRUG00000006896	-	84	47.590
ENSTRUG00000023491	-	78	33.333	ENSTRUG00000015366	patz1	57	33.333
ENSTRUG00000023491	-	97	45.783	ENSTRUG00000000995	-	84	45.783
ENSTRUG00000023491	-	66	42.405	ENSTRUG00000014476	-	83	42.405
ENSTRUG00000023491	-	59	45.946	ENSTRUG00000003277	zbtb17	93	45.946
ENSTRUG00000023491	-	98	46.988	ENSTRUG00000019483	-	100	44.509
ENSTRUG00000023491	-	61	42.771	ENSTRUG00000023925	-	58	42.771
ENSTRUG00000023491	-	85	43.353	ENSTRUG00000015687	-	94	44.444
ENSTRUG00000023491	-	64	31.928	ENSTRUG00000001452	PRDM15	58	32.727
ENSTRUG00000023491	-	58	47.778	ENSTRUG00000005180	-	85	47.778
ENSTRUG00000023491	-	61	42.541	ENSTRUG00000003111	-	84	42.541
ENSTRUG00000023491	-	64	47.619	ENSTRUG00000022076	-	80	47.619
ENSTRUG00000023491	-	57	54.225	ENSTRUG00000012273	-	74	54.225
ENSTRUG00000023491	-	59	41.875	ENSTRUG00000004525	gfi1b	51	41.875
ENSTRUG00000023491	-	61	41.463	ENSTRUG00000013850	prdm5	74	41.463
ENSTRUG00000023491	-	74	44.048	ENSTRUG00000020582	-	86	48.824
ENSTRUG00000023491	-	83	40.833	ENSTRUG00000000415	gfi1ab	53	42.105
ENSTRUG00000023491	-	55	39.474	ENSTRUG00000000419	sna2	73	30.918
ENSTRUG00000023491	-	65	38.922	ENSTRUG00000012157	-	87	39.594
ENSTRUG00000023491	-	65	43.284	ENSTRUG00000022666	-	50	43.284
ENSTRUG00000023491	-	68	41.379	ENSTRUG00000007998	mecom	55	41.379
ENSTRUG00000023491	-	60	48.795	ENSTRUG00000019940	-	54	48.795
ENSTRUG00000023491	-	79	39.655	ENSTRUG00000009203	zbtb41	52	39.655
ENSTRUG00000023491	-	67	34.483	ENSTRUG00000025597	znf646	74	38.346
ENSTRUG00000023491	-	62	40.828	ENSTRUG00000025881	-	67	40.828
ENSTRUG00000023491	-	98	45.783	ENSTRUG00000007022	-	85	45.783
ENSTRUG00000023491	-	65	42.763	ENSTRUG00000005321	-	94	42.763
ENSTRUG00000023491	-	59	48.408	ENSTRUG00000013906	-	92	48.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023491	-	58	47.101	ENSAPOG00000023008	-	60	47.101	Acanthochromis_polyacanthus
ENSTRUG00000023491	-	99	60.993	ENSAPOG00000021966	-	76	60.993	Acanthochromis_polyacanthus
ENSTRUG00000023491	-	64	45.833	ENSAPOG00000009709	-	54	45.833	Acanthochromis_polyacanthus
ENSTRUG00000023491	-	60	45.133	ENSACIG00000006228	-	69	45.133	Amphilophus_citrinellus
ENSTRUG00000023491	-	73	44.848	ENSACIG00000022738	-	99	42.012	Amphilophus_citrinellus
ENSTRUG00000023491	-	76	60.094	ENSACIG00000007096	-	94	60.094	Amphilophus_citrinellus
ENSTRUG00000023491	-	99	61.348	ENSAOCG00000022529	-	76	61.348	Amphiprion_ocellaris
ENSTRUG00000023491	-	69	44.848	ENSAOCG00000016409	-	67	44.848	Amphiprion_ocellaris
ENSTRUG00000023491	-	99	31.741	ENSAPEG00000009553	-	76	31.741	Amphiprion_percula
ENSTRUG00000023491	-	58	47.826	ENSAPEG00000008746	-	60	47.826	Amphiprion_percula
ENSTRUG00000023491	-	88	62.500	ENSAPEG00000006572	-	75	62.500	Amphiprion_percula
ENSTRUG00000023491	-	58	46.847	ENSATEG00000015238	-	59	46.377	Anabas_testudineus
ENSTRUG00000023491	-	64	44.231	ENSATEG00000022064	-	93	43.293	Anabas_testudineus
ENSTRUG00000023491	-	65	44.311	ENSATEG00000014684	-	92	41.135	Anabas_testudineus
ENSTRUG00000023491	-	67	63.918	ENSATEG00000021602	-	76	63.918	Anabas_testudineus
ENSTRUG00000023491	-	59	44.361	ENSACLG00000018716	-	72	44.361	Astatotilapia_calliptera
ENSTRUG00000023491	-	98	42.478	ENSACLG00000020333	-	95	42.478	Astatotilapia_calliptera
ENSTRUG00000023491	-	62	42.177	ENSACLG00000022482	-	83	42.177	Astatotilapia_calliptera
ENSTRUG00000023491	-	63	40.278	ENSACLG00000019349	-	70	40.278	Astatotilapia_calliptera
ENSTRUG00000023491	-	77	38.012	ENSACLG00000014365	-	98	38.012	Astatotilapia_calliptera
ENSTRUG00000023491	-	63	46.061	ENSACLG00000015462	-	63	46.061	Astatotilapia_calliptera
ENSTRUG00000023491	-	59	39.877	ENSACLG00000019482	-	74	39.877	Astatotilapia_calliptera
ENSTRUG00000023491	-	98	42.478	ENSACLG00000006718	-	95	42.478	Astatotilapia_calliptera
ENSTRUG00000023491	-	58	44.361	ENSACLG00000001368	-	88	44.361	Astatotilapia_calliptera
ENSTRUG00000023491	-	58	44.512	ENSACLG00000011239	-	69	44.512	Astatotilapia_calliptera
ENSTRUG00000023491	-	97	49.153	ENSACLG00000005795	-	90	49.153	Astatotilapia_calliptera
ENSTRUG00000023491	-	98	56.690	ENSACLG00000008374	-	75	56.690	Astatotilapia_calliptera
ENSTRUG00000023491	-	98	40.556	ENSAMXG00000007973	-	90	40.268	Astyanax_mexicanus
ENSTRUG00000023491	-	62	39.568	ENSAMXG00000034934	-	86	39.568	Astyanax_mexicanus
ENSTRUG00000023491	-	64	45.283	ENSCSEG00000019848	-	63	47.321	Cynoglossus_semilaevis
ENSTRUG00000023491	-	62	38.636	ENSCSEG00000019599	-	85	38.636	Cynoglossus_semilaevis
ENSTRUG00000023491	-	59	44.828	ENSCVAG00000019097	-	61	43.452	Cyprinodon_variegatus
ENSTRUG00000023491	-	97	36.552	ENSCVAG00000020968	-	89	36.552	Cyprinodon_variegatus
ENSTRUG00000023491	-	70	42.683	ENSCVAG00000010887	-	77	42.683	Cyprinodon_variegatus
ENSTRUG00000023491	-	63	44.509	ENSELUG00000004677	-	69	46.386	Esox_lucius
ENSTRUG00000023491	-	59	39.286	ENSFHEG00000004548	-	55	39.286	Fundulus_heteroclitus
ENSTRUG00000023491	-	58	45.455	ENSFHEG00000003460	-	67	43.976	Fundulus_heteroclitus
ENSTRUG00000023491	-	95	39.444	ENSFHEG00000013228	-	90	39.444	Fundulus_heteroclitus
ENSTRUG00000023491	-	57	44.776	ENSGMOG00000017518	-	64	44.776	Gadus_morhua
ENSTRUG00000023491	-	59	44.144	ENSGMOG00000009187	ZNF626	75	44.144	Gadus_morhua
ENSTRUG00000023491	-	66	37.195	ENSGAFG00000007532	-	86	37.195	Gambusia_affinis
ENSTRUG00000023491	-	63	43.791	ENSGAFG00000001481	-	90	43.791	Gambusia_affinis
ENSTRUG00000023491	-	60	45.732	ENSGAGG00000015232	-	60	45.732	Gopherus_agassizii
ENSTRUG00000023491	-	68	38.525	ENSHBUG00000009274	-	90	37.079	Haplochromis_burtoni
ENSTRUG00000023491	-	55	42.718	ENSHBUG00000017251	-	98	42.718	Haplochromis_burtoni
ENSTRUG00000023491	-	96	47.458	ENSHBUG00000011944	-	81	47.458	Haplochromis_burtoni
ENSTRUG00000023491	-	98	56.690	ENSHBUG00000017924	-	75	56.690	Haplochromis_burtoni
ENSTRUG00000023491	-	58	43.750	ENSHBUG00000020544	-	84	43.750	Haplochromis_burtoni
ENSTRUG00000023491	-	96	49.153	ENSHBUG00000013065	-	86	49.153	Haplochromis_burtoni
ENSTRUG00000023491	-	61	46.552	ENSHBUG00000020527	-	91	46.552	Haplochromis_burtoni
ENSTRUG00000023491	-	63	46.061	ENSHBUG00000019377	-	63	46.061	Haplochromis_burtoni
ENSTRUG00000023491	-	96	44.068	ENSHCOG00000020309	-	73	44.068	Hippocampus_comes
ENSTRUG00000023491	-	66	45.098	ENSIPUG00000022266	ZNF135	60	47.126	Ictalurus_punctatus
ENSTRUG00000023491	-	60	45.455	ENSKMAG00000015304	-	68	45.455	Kryptolebias_marmoratus
ENSTRUG00000023491	-	87	43.791	ENSKMAG00000000802	-	73	43.791	Kryptolebias_marmoratus
ENSTRUG00000023491	-	61	50.000	ENSKMAG00000017903	-	55	50.000	Kryptolebias_marmoratus
ENSTRUG00000023491	-	79	39.344	ENSLBEG00000009663	-	66	39.344	Labrus_bergylta
ENSTRUG00000023491	-	61	41.739	ENSLBEG00000026457	-	94	41.593	Labrus_bergylta
ENSTRUG00000023491	-	57	42.105	ENSLBEG00000008909	-	77	42.105	Labrus_bergylta
ENSTRUG00000023491	-	99	55.160	ENSLBEG00000008850	-	76	55.160	Labrus_bergylta
ENSTRUG00000023491	-	79	43.939	ENSLOCG00000017422	-	86	44.242	Lepisosteus_oculatus
ENSTRUG00000023491	-	79	46.067	ENSMAMG00000002083	-	93	46.067	Mastacembelus_armatus
ENSTRUG00000023491	-	58	50.943	ENSMAMG00000015434	-	71	50.943	Mastacembelus_armatus
ENSTRUG00000023491	-	58	46.667	ENSMAMG00000010902	-	58	46.667	Mastacembelus_armatus
ENSTRUG00000023491	-	58	37.349	ENSMZEG00005025006	-	91	37.349	Maylandia_zebra
ENSTRUG00000023491	-	64	40.994	ENSMZEG00005022884	-	93	40.994	Maylandia_zebra
ENSTRUG00000023491	-	64	47.333	ENSMZEG00005025725	-	95	47.333	Maylandia_zebra
ENSTRUG00000023491	-	59	46.392	ENSMZEG00005023565	-	75	45.098	Maylandia_zebra
ENSTRUG00000023491	-	65	38.667	ENSMZEG00005003951	-	68	38.667	Maylandia_zebra
ENSTRUG00000023491	-	64	46.108	ENSMZEG00005028563	-	85	46.108	Maylandia_zebra
ENSTRUG00000023491	-	64	47.682	ENSMZEG00005025125	-	94	47.682	Maylandia_zebra
ENSTRUG00000023491	-	96	49.153	ENSMZEG00005011812	-	86	49.153	Maylandia_zebra
ENSTRUG00000023491	-	97	42.500	ENSMZEG00005012676	-	96	42.500	Maylandia_zebra
ENSTRUG00000023491	-	57	47.531	ENSMZEG00005020568	-	77	47.531	Maylandia_zebra
ENSTRUG00000023491	-	98	56.690	ENSMZEG00005011431	-	89	61.404	Maylandia_zebra
ENSTRUG00000023491	-	98	50.847	ENSMZEG00005025965	-	84	50.847	Maylandia_zebra
ENSTRUG00000023491	-	57	44.000	ENSMZEG00005027551	-	87	44.000	Maylandia_zebra
ENSTRUG00000023491	-	63	46.061	ENSMZEG00005018502	-	63	46.061	Maylandia_zebra
ENSTRUG00000023491	-	65	45.946	ENSMMOG00000009252	-	65	45.652	Mola_mola
ENSTRUG00000023491	-	76	38.843	ENSMMOG00000005437	-	78	38.843	Mola_mola
ENSTRUG00000023491	-	99	58.571	ENSMALG00000005696	-	77	59.431	Monopterus_albus
ENSTRUG00000023491	-	63	46.875	ENSMALG00000010959	-	91	42.478	Monopterus_albus
ENSTRUG00000023491	-	58	48.551	ENSMALG00000011756	-	60	48.551	Monopterus_albus
ENSTRUG00000023491	-	87	39.535	ENSMALG00000012840	-	70	39.535	Monopterus_albus
ENSTRUG00000023491	-	66	44.944	ENSMALG00000002956	-	84	44.944	Monopterus_albus
ENSTRUG00000023491	-	95	56.690	ENSNBRG00000004792	-	74	56.690	Neolamprologus_brichardi
ENSTRUG00000023491	-	64	42.308	ENSNBRG00000019004	-	66	42.308	Neolamprologus_brichardi
ENSTRUG00000023491	-	60	39.597	ENSNBRG00000004723	-	83	39.597	Neolamprologus_brichardi
ENSTRUG00000023491	-	63	46.667	ENSNBRG00000024179	-	63	46.667	Neolamprologus_brichardi
ENSTRUG00000023491	-	57	42.771	ENSONIG00000001986	-	96	42.771	Oreochromis_niloticus
ENSTRUG00000023491	-	56	46.914	ENSONIG00000008297	-	90	46.914	Oreochromis_niloticus
ENSTRUG00000023491	-	56	43.966	ENSONIG00000015024	-	88	43.966	Oreochromis_niloticus
ENSTRUG00000023491	-	57	44.578	ENSONIG00000020667	-	99	44.578	Oreochromis_niloticus
ENSTRUG00000023491	-	61	40.984	ENSONIG00000014012	-	91	40.984	Oreochromis_niloticus
ENSTRUG00000023491	-	63	42.177	ENSONIG00000012374	-	98	42.177	Oreochromis_niloticus
ENSTRUG00000023491	-	64	46.154	ENSONIG00000019139	-	99	46.154	Oreochromis_niloticus
ENSTRUG00000023491	-	59	54.717	ENSORLG00000012581	-	52	54.717	Oryzias_latipes
ENSTRUG00000023491	-	63	43.976	ENSOMEG00000015179	-	71	43.976	Oryzias_melastigma
ENSTRUG00000023491	-	64	46.061	ENSPKIG00000015951	-	65	46.061	Paramormyrops_kingsleyae
ENSTRUG00000023491	-	59	43.478	ENSPMGG00000020606	-	92	43.478	Periophthalmus_magnuspinnatus
ENSTRUG00000023491	-	64	42.012	ENSPMGG00000008518	-	94	42.012	Periophthalmus_magnuspinnatus
ENSTRUG00000023491	-	58	43.373	ENSPFOG00000000667	-	66	43.373	Poecilia_formosa
ENSTRUG00000023491	-	61	45.255	ENSPFOG00000018771	-	88	45.255	Poecilia_formosa
ENSTRUG00000023491	-	72	43.452	ENSPLAG00000013745	-	93	48.214	Poecilia_latipinna
ENSTRUG00000023491	-	99	45.263	ENSPLAG00000005106	-	87	45.263	Poecilia_latipinna
ENSTRUG00000023491	-	59	46.825	ENSPMEG00000020864	-	85	46.825	Poecilia_mexicana
ENSTRUG00000023491	-	59	43.885	ENSPMEG00000022651	-	91	43.885	Poecilia_mexicana
ENSTRUG00000023491	-	93	49.153	ENSPNYG00000019325	-	94	49.153	Pundamilia_nyererei
ENSTRUG00000023491	-	63	41.916	ENSPNYG00000020737	-	86	41.916	Pundamilia_nyererei
ENSTRUG00000023491	-	97	49.153	ENSPNYG00000011024	-	90	49.153	Pundamilia_nyererei
ENSTRUG00000023491	-	60	46.667	ENSPNYG00000003834	-	84	46.667	Pundamilia_nyererei
ENSTRUG00000023491	-	98	56.690	ENSPNYG00000016157	-	75	56.690	Pundamilia_nyererei
ENSTRUG00000023491	-	59	44.898	ENSPNAG00000025882	-	62	46.386	Pygocentrus_nattereri
ENSTRUG00000023491	-	59	41.463	ENSPNAG00000011660	-	53	41.463	Pygocentrus_nattereri
ENSTRUG00000023491	-	65	44.444	ENSPNAG00000010850	-	77	44.444	Pygocentrus_nattereri
ENSTRUG00000023491	-	67	42.771	ENSSFOG00015006083	-	56	43.262	Scleropages_formosus
ENSTRUG00000023491	-	96	46.491	ENSSMAG00000006902	-	71	46.491	Scophthalmus_maximus
ENSTRUG00000023491	-	98	47.143	ENSSMAG00000006155	-	74	47.143	Scophthalmus_maximus
ENSTRUG00000023491	-	70	46.667	ENSSMAG00000013828	-	68	46.667	Scophthalmus_maximus
ENSTRUG00000023491	-	76	45.139	ENSSMAG00000013663	-	89	46.970	Scophthalmus_maximus
ENSTRUG00000023491	-	99	63.345	ENSSDUG00000022035	-	76	63.345	Seriola_dumerili
ENSTRUG00000023491	-	85	46.667	ENSSDUG00000015013	-	75	46.667	Seriola_dumerili
ENSTRUG00000023491	-	64	45.509	ENSSDUG00000023764	-	90	45.509	Seriola_dumerili
ENSTRUG00000023491	-	57	49.074	ENSSDUG00000023765	-	67	49.074	Seriola_dumerili
ENSTRUG00000023491	-	85	46.667	ENSSLDG00000021278	-	75	46.667	Seriola_lalandi_dorsalis
ENSTRUG00000023491	-	99	62.989	ENSSLDG00000025676	-	76	62.989	Seriola_lalandi_dorsalis
ENSTRUG00000023491	-	59	50.943	ENSSPAG00000008950	-	69	40.860	Stegastes_partitus
ENSTRUG00000023491	-	62	76.023	ENSSPAG00000007691	-	76	76.023	Stegastes_partitus
ENSTRUG00000023491	-	69	46.061	ENSSPAG00000007403	-	82	55.102	Stegastes_partitus
ENSTRUG00000023491	-	59	50.549	ENSTGUG00000018254	-	99	50.549	Taeniopygia_guttata
ENSTRUG00000023491	-	61	45.223	ENSTGUG00000015549	-	100	45.223	Taeniopygia_guttata
ENSTRUG00000023491	-	57	47.101	ENSTGUG00000018439	-	100	47.101	Taeniopygia_guttata
ENSTRUG00000023491	-	63	44.578	ENSTNIG00000002344	-	100	44.578	Tetraodon_nigroviridis
ENSTRUG00000023491	-	62	46.753	ENSXCOG00000011372	-	61	46.753	Xiphophorus_couchianus
ENSTRUG00000023491	-	63	37.273	ENSXCOG00000020769	-	94	37.273	Xiphophorus_couchianus
ENSTRUG00000023491	-	67	42.254	ENSXCOG00000013306	-	60	42.254	Xiphophorus_couchianus
ENSTRUG00000023491	-	95	38.983	ENSXMAG00000025174	-	91	38.983	Xiphophorus_maculatus
ENSTRUG00000023491	-	90	44.604	ENSXMAG00000024973	-	64	44.604	Xiphophorus_maculatus