EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000023543 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6843 bases
Position: chr15:11247331-11254173
Accession: 101079009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051003	RRM_1	PF00076.22	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055629	-	5516	XM_003971347	ENSTRUP00000051003	802 (aa)	XP_003971396	-

Gene Model

Click here to download ENSTRUG00000023543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023543	scaf4a	89	76.253	ENSAPOG00000002946	scaf4a	66	64.373	Acanthochromis_polyacanthus
ENSTRUG00000023543	scaf4a	89	75.817	ENSAOCG00000000615	scaf4a	66	64.865	Amphiprion_ocellaris
ENSTRUG00000023543	scaf4a	89	75.381	ENSAPEG00000021229	scaf4a	66	64.005	Amphiprion_percula
ENSTRUG00000023543	scaf4a	81	72.768	ENSMALG00000013825	scaf4a	70	63.991	Monopterus_albus
ENSTRUG00000023543	scaf4a	76	54.198	ENSONIG00000004687	scaf4a	60	59.637	Oreochromis_niloticus
ENSTRUG00000023543	scaf4a	88	48.750	ENSPMGG00000016741	scaf4a	64	56.364	Periophthalmus_magnuspinnatus
ENSTRUG00000023543	scaf4a	58	74.207	ENSSMAG00000017901	scaf4a	67	64.260	Scophthalmus_maximus
ENSTRUG00000023543	scaf4a	75	69.504	ENSTNIG00000009945	scaf4a	58	71.494	Tetraodon_nigroviridis