EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000023874 (Gene tree)
Gene ID: 101076881
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4891 bases
Position: chr8:10348656-10353546
Accession: 101076881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000048699	RRM_5	PF13893.6	5.7e-10	1	2
ENSTRUP00000048699	RRM_5	PF13893.6	5.7e-10	2	2
ENSTRUP00000051263	RRM_5	PF13893.6	5.7e-10	1	2
ENSTRUP00000051263	RRM_5	PF13893.6	5.7e-10	2	2
ENSTRUP00000048699	RRM_1	PF00076.22	3.4e-26	1	2
ENSTRUP00000048699	RRM_1	PF00076.22	3.4e-26	2	2
ENSTRUP00000051263	RRM_1	PF00076.22	3.4e-26	1	2
ENSTRUP00000051263	RRM_1	PF00076.22	3.4e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051102	-	4392	XM_003966800	ENSTRUP00000048699	343 (aa)	XP_003966849	UPI0002988FE9
ENSTRUT00000056754	-	4188	XM_011606533	ENSTRUP00000051263	343 (aa)	XP_011604835	UPI0002988FE9

Gene Model

Click here to download ENSTRUG00000023874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000023874	rbm4.3	92	48.223	ENSTRUG00000013334	rbm4.1	65	56.291
ENSTRUG00000023874	rbm4.3	99	64.773	ENSTRUG00000020901	rbm4.3	97	63.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023874	rbm4.3	100	78.324	ENSAPOG00000002991	rbm4.3	100	79.480	Acanthochromis_polyacanthus
ENSTRUG00000023874	rbm4.3	96	68.235	ENSAPOG00000002953	rbm4.3	97	65.487	Acanthochromis_polyacanthus
ENSTRUG00000023874	rbm4.3	100	80.229	ENSACIG00000021295	rbm4.3	100	79.370	Amphilophus_citrinellus
ENSTRUG00000023874	rbm4.3	96	64.602	ENSACIG00000021311	-	97	62.130	Amphilophus_citrinellus
ENSTRUG00000023874	rbm4.3	96	66.667	ENSAOCG00000008015	rbm4.3	97	64.793	Amphiprion_ocellaris
ENSTRUG00000023874	rbm4.3	96	77.844	ENSAOCG00000007992	rbm4.3	96	78.743	Amphiprion_ocellaris
ENSTRUG00000023874	rbm4.3	96	67.847	ENSAPEG00000017324	rbm4.3	97	64.793	Amphiprion_percula
ENSTRUG00000023874	rbm4.3	96	78.144	ENSAPEG00000017288	rbm4.3	96	79.042	Amphiprion_percula
ENSTRUG00000023874	rbm4.3	100	81.924	ENSATEG00000019395	rbm4.3	100	81.341	Anabas_testudineus
ENSTRUG00000023874	rbm4.3	96	66.372	ENSATEG00000019375	rbm4.3	97	64.497	Anabas_testudineus
ENSTRUG00000023874	rbm4.3	96	64.897	ENSACLG00000010620	-	97	62.426	Astatotilapia_calliptera
ENSTRUG00000023874	rbm4.3	100	78.223	ENSACLG00000010642	rbm4.3	100	77.364	Astatotilapia_calliptera
ENSTRUG00000023874	rbm4.3	53	71.823	ENSAMXG00000040224	rbm4.3	63	76.159	Astyanax_mexicanus
ENSTRUG00000023874	rbm4.3	97	62.428	ENSCSEG00000013659	rbm4.3	98	60.933	Cynoglossus_semilaevis
ENSTRUG00000023874	rbm4.3	100	74.785	ENSCVAG00000008502	rbm4.3	100	75.072	Cyprinodon_variegatus
ENSTRUG00000023874	rbm4.3	96	63.343	ENSCVAG00000008508	rbm4.3	97	60.882	Cyprinodon_variegatus
ENSTRUG00000023874	rbm4.3	94	66.071	ENSDARG00000022129	rbm4.3	97	62.832	Danio_rerio
ENSTRUG00000023874	rbm4.3	99	66.856	ENSELUG00000022150	rbm4.3	97	62.941	Esox_lucius
ENSTRUG00000023874	rbm4.3	99	64.407	ENSELUG00000022155	rbm4.3	97	64.620	Esox_lucius
ENSTRUG00000023874	rbm4.3	99	66.571	ENSELUG00000022168	rbm4.3	97	68.343	Esox_lucius
ENSTRUG00000023874	rbm4.3	100	71.910	ENSFHEG00000023096	rbm4.3	100	72.191	Fundulus_heteroclitus
ENSTRUG00000023874	rbm4.3	79	68.817	ENSFHEG00000023137	rbm4.3	86	63.869	Fundulus_heteroclitus
ENSTRUG00000023874	rbm4.3	63	76.712	ENSGMOG00000004032	rbm4.3	53	74.312	Gadus_morhua
ENSTRUG00000023874	rbm4.3	96	71.856	ENSGAFG00000001935	rbm4.3	97	70.958	Gambusia_affinis
ENSTRUG00000023874	rbm4.3	96	80.184	ENSGACG00000019980	rbm4.3	100	74.000	Gasterosteus_aculeatus
ENSTRUG00000023874	rbm4.3	96	64.897	ENSHBUG00000009020	-	97	62.426	Haplochromis_burtoni
ENSTRUG00000023874	rbm4.3	100	78.797	ENSHBUG00000009051	rbm4.3	100	77.937	Haplochromis_burtoni
ENSTRUG00000023874	rbm4.3	94	63.554	ENSHCOG00000010349	rbm4.3	99	62.428	Hippocampus_comes
ENSTRUG00000023874	rbm4.3	100	67.045	ENSHCOG00000010363	rbm4.3	94	69.345	Hippocampus_comes
ENSTRUG00000023874	rbm4.3	96	62.974	ENSIPUG00000022943	RBM4B	97	62.242	Ictalurus_punctatus
ENSTRUG00000023874	rbm4.3	100	71.307	ENSKMAG00000014541	rbm4.3	95	70.833	Kryptolebias_marmoratus
ENSTRUG00000023874	rbm4.3	99	60.231	ENSKMAG00000017468	rbm4.3	97	59.587	Kryptolebias_marmoratus
ENSTRUG00000023874	rbm4.3	96	65.000	ENSLBEG00000001071	-	97	63.127	Labrus_bergylta
ENSTRUG00000023874	rbm4.3	57	83.077	ENSLBEG00000001025	rbm4.3	92	82.759	Labrus_bergylta
ENSTRUG00000023874	rbm4.3	96	65.782	ENSMAMG00000004715	-	81	64.201	Mastacembelus_armatus
ENSTRUG00000023874	rbm4.3	100	80.758	ENSMAMG00000004701	rbm4.3	100	79.883	Mastacembelus_armatus
ENSTRUG00000023874	rbm4.3	84	61.953	ENSMZEG00005028537	-	85	60.000	Maylandia_zebra
ENSTRUG00000023874	rbm4.3	84	81.293	ENSMZEG00005007441	rbm4.3	79	80.272	Maylandia_zebra
ENSTRUG00000023874	rbm4.3	96	61.357	ENSMZEG00005007417	-	97	58.876	Maylandia_zebra
ENSTRUG00000023874	rbm4.3	100	78.223	ENSMZEG00005028540	rbm4.3	100	77.364	Maylandia_zebra
ENSTRUG00000023874	rbm4.3	100	86.377	ENSMMOG00000012191	rbm4.3	100	86.667	Mola_mola
ENSTRUG00000023874	rbm4.3	97	72.754	ENSMALG00000003032	rbm4.3	95	76.623	Monopterus_albus
ENSTRUG00000023874	rbm4.3	96	76.524	ENSMALG00000015014	-	96	76.220	Monopterus_albus
ENSTRUG00000023874	rbm4.3	86	67.434	ENSMALG00000003001	rbm4.3	87	65.320	Monopterus_albus
ENSTRUG00000023874	rbm4.3	100	78.736	ENSNBRG00000012372	rbm4.3	100	78.448	Neolamprologus_brichardi
ENSTRUG00000023874	rbm4.3	100	77.557	ENSONIG00000018378	rbm4.3	100	77.273	Oreochromis_niloticus
ENSTRUG00000023874	rbm4.3	96	64.897	ENSONIG00000018380	-	97	62.426	Oreochromis_niloticus
ENSTRUG00000023874	rbm4.3	98	60.684	ENSORLG00000012473	rbm4.3	98	59.259	Oryzias_latipes
ENSTRUG00000023874	rbm4.3	100	67.435	ENSORLG00000024749	rbm4.3	100	66.957	Oryzias_latipes
ENSTRUG00000023874	rbm4.3	98	60.571	ENSORLG00000011589	rbm4.3	98	59.544	Oryzias_latipes
ENSTRUG00000023874	rbm4.3	98	60.286	ENSORLG00020012474	rbm4.3	98	59.544	Oryzias_latipes_hni
ENSTRUG00000023874	rbm4.3	98	60.684	ENSORLG00020012464	rbm4.3	98	59.259	Oryzias_latipes_hni
ENSTRUG00000023874	rbm4.3	100	67.435	ENSORLG00020012482	rbm4.3	97	67.372	Oryzias_latipes_hni
ENSTRUG00000023874	rbm4.3	98	60.286	ENSORLG00015013698	rbm4.3	98	59.259	Oryzias_latipes_hsok
ENSTRUG00000023874	rbm4.3	96	67.868	ENSORLG00015013721	rbm4.3	96	67.372	Oryzias_latipes_hsok
ENSTRUG00000023874	rbm4.3	98	60.114	ENSORLG00015013686	rbm4.3	98	58.689	Oryzias_latipes_hsok
ENSTRUG00000023874	rbm4.3	99	58.708	ENSOMEG00000005918	rbm4.3	94	61.515	Oryzias_melastigma
ENSTRUG00000023874	rbm4.3	96	71.471	ENSOMEG00000005950	rbm4.3	96	71.084	Oryzias_melastigma
ENSTRUG00000023874	rbm4.3	96	57.391	ENSOMEG00000005929	rbm4.3	97	57.803	Oryzias_melastigma
ENSTRUG00000023874	rbm4.3	92	65.964	ENSPKIG00000007001	rbm4.3	64	78.146	Paramormyrops_kingsleyae
ENSTRUG00000023874	rbm4.3	99	62.500	ENSPLAG00000006131	rbm4.3	97	59.706	Poecilia_latipinna
ENSTRUG00000023874	rbm4.3	100	72.521	ENSPLAG00000006077	rbm4.3	100	71.388	Poecilia_latipinna
ENSTRUG00000023874	rbm4.3	100	73.295	ENSPMEG00000024260	rbm4.3	100	72.727	Poecilia_mexicana
ENSTRUG00000023874	rbm4.3	96	64.516	ENSPMEG00000024263	rbm4.3	97	60.882	Poecilia_mexicana
ENSTRUG00000023874	rbm4.3	99	62.500	ENSPMEG00000024271	rbm4.3	97	60.000	Poecilia_mexicana
ENSTRUG00000023874	rbm4.3	99	60.745	ENSPREG00000002156	rbm4.3	97	57.864	Poecilia_reticulata
ENSTRUG00000023874	rbm4.3	100	73.580	ENSPREG00000002093	-	100	73.011	Poecilia_reticulata
ENSTRUG00000023874	rbm4.3	96	64.897	ENSPNYG00000018541	rbm4.3	97	62.426	Pundamilia_nyererei
ENSTRUG00000023874	rbm4.3	100	78.000	ENSPNYG00000018564	rbm4.3	100	77.143	Pundamilia_nyererei
ENSTRUG00000023874	rbm4.3	99	62.810	ENSPNAG00000013053	rbm4.3	97	62.356	Pygocentrus_nattereri
ENSTRUG00000023874	rbm4.3	99	59.178	ENSSFOG00015015563	rbm4.3	97	57.224	Scleropages_formosus
ENSTRUG00000023874	rbm4.3	100	76.232	ENSSMAG00000013653	rbm4.3	100	75.291	Scophthalmus_maximus
ENSTRUG00000023874	rbm4.3	96	68.142	ENSSMAG00000013644	rbm4.3	97	63.905	Scophthalmus_maximus
ENSTRUG00000023874	rbm4.3	96	66.372	ENSSDUG00000018435	rbm4.3	97	64.497	Seriola_dumerili
ENSTRUG00000023874	rbm4.3	100	79.942	ENSSDUG00000018422	rbm4.3	100	79.070	Seriola_dumerili
ENSTRUG00000023874	rbm4.3	100	79.360	ENSSLDG00000017182	rbm4.3	100	78.488	Seriola_lalandi_dorsalis
ENSTRUG00000023874	rbm4.3	96	66.372	ENSSLDG00000017204	rbm4.3	97	64.497	Seriola_lalandi_dorsalis
ENSTRUG00000023874	rbm4.3	99	65.714	ENSSPAG00000008062	rbm4.3	97	64.095	Stegastes_partitus
ENSTRUG00000023874	rbm4.3	100	78.261	ENSSPAG00000008041	rbm4.3	85	78.841	Stegastes_partitus
ENSTRUG00000023874	rbm4.3	99	63.429	ENSTNIG00000005668	rbm4.3	97	61.243	Tetraodon_nigroviridis
ENSTRUG00000023874	rbm4.3	96	63.930	ENSXCOG00000006001	rbm4.3	97	60.588	Xiphophorus_couchianus
ENSTRUG00000023874	rbm4.3	96	74.405	ENSXCOG00000005996	rbm4.3	97	74.107	Xiphophorus_couchianus
ENSTRUG00000023874	rbm4.3	99	62.784	ENSXMAG00000011698	rbm4.3	97	61.176	Xiphophorus_maculatus
ENSTRUG00000023874	rbm4.3	96	73.964	ENSXMAG00000025173	rbm4.3	100	73.295	Xiphophorus_maculatus
ENSTRUG00000023874	rbm4.3	89	66.877	ENSXMAG00000021997	rbm4.3	97	60.588	Xiphophorus_maculatus