EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000023898 (Gene tree)
Gene ID: 105419061
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC105419061
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 1060 bases
Position: chrHE592628.1:6659-7718
Accession: 105419061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053751	zf-CCCH	PF00642.24	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051924	-	972	XM_011620417	ENSTRUP00000053751	242 (aa)	XP_011618719	UPI0005D29DFA

Gene Model

Click here to download ENSTRUG00000023898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023898	si:ch211-113e8.11	62	68.831	ENSAPOG00000010990	si:ch211-113e8.11	99	55.725	Acanthochromis_polyacanthus
ENSTRUG00000023898	si:ch211-113e8.11	58	65.278	ENSACIG00000011566	si:ch211-113e8.11	74	65.278	Amphilophus_citrinellus
ENSTRUG00000023898	si:ch211-113e8.11	99	55.472	ENSAOCG00000022156	si:ch211-113e8.11	99	57.088	Amphiprion_ocellaris
ENSTRUG00000023898	si:ch211-113e8.11	99	54.167	ENSAPEG00000018284	si:ch211-113e8.11	99	54.511	Amphiprion_percula
ENSTRUG00000023898	si:ch211-113e8.11	99	53.815	ENSATEG00000018391	si:ch211-113e8.11	99	54.800	Anabas_testudineus
ENSTRUG00000023898	si:ch211-113e8.11	99	54.435	ENSACLG00000017011	si:ch211-113e8.11	99	56.048	Astatotilapia_calliptera
ENSTRUG00000023898	si:ch211-113e8.11	97	43.893	ENSAMXG00000000733	si:ch211-113e8.11	97	45.490	Astyanax_mexicanus
ENSTRUG00000023898	si:ch211-113e8.11	100	53.846	ENSCSEG00000004538	si:ch211-113e8.11	100	53.846	Cynoglossus_semilaevis
ENSTRUG00000023898	si:ch211-113e8.11	99	51.575	ENSCVAG00000020156	si:ch211-113e8.11	99	49.035	Cyprinodon_variegatus
ENSTRUG00000023898	si:ch211-113e8.11	95	47.436	ENSDARG00000076585	si:ch211-113e8.11	97	48.739	Danio_rerio
ENSTRUG00000023898	si:ch211-113e8.11	58	30.000	FBgn0259728	CG42382	75	30.000	Drosophila_melanogaster
ENSTRUG00000023898	si:ch211-113e8.11	99	48.855	ENSELUG00000001130	si:ch211-113e8.11	99	48.855	Esox_lucius
ENSTRUG00000023898	si:ch211-113e8.11	99	51.440	ENSFHEG00000007870	si:ch211-113e8.11	99	50.996	Fundulus_heteroclitus
ENSTRUG00000023898	si:ch211-113e8.11	99	54.118	ENSGAFG00000020570	si:ch211-113e8.11	99	54.365	Gambusia_affinis
ENSTRUG00000023898	si:ch211-113e8.11	99	54.065	ENSHBUG00000003552	si:ch211-113e8.11	99	55.691	Haplochromis_burtoni
ENSTRUG00000023898	si:ch211-113e8.11	99	50.598	ENSHCOG00000002041	si:ch211-113e8.11	99	49.206	Hippocampus_comes
ENSTRUG00000023898	si:ch211-113e8.11	95	50.413	ENSIPUG00000002260	si:ch211-113e8.11	93	50.413	Ictalurus_punctatus
ENSTRUG00000023898	si:ch211-113e8.11	99	54.980	ENSKMAG00000000086	si:ch211-113e8.11	99	54.980	Kryptolebias_marmoratus
ENSTRUG00000023898	si:ch211-113e8.11	99	50.370	ENSLBEG00000008353	si:ch211-113e8.11	99	55.019	Labrus_bergylta
ENSTRUG00000023898	si:ch211-113e8.11	61	39.474	ENSLACG00000004304	si:ch211-113e8.11	92	37.766	Latimeria_chalumnae
ENSTRUG00000023898	si:ch211-113e8.11	66	63.314	ENSMAMG00000019098	si:ch211-113e8.11	87	58.447	Mastacembelus_armatus
ENSTRUG00000023898	si:ch211-113e8.11	99	55.372	ENSMZEG00005023658	si:ch211-113e8.11	99	57.025	Maylandia_zebra
ENSTRUG00000023898	si:ch211-113e8.11	62	72.549	ENSMMOG00000007254	si:ch211-113e8.11	99	55.328	Mola_mola
ENSTRUG00000023898	si:ch211-113e8.11	99	54.231	ENSMALG00000005110	si:ch211-113e8.11	99	54.231	Monopterus_albus
ENSTRUG00000023898	si:ch211-113e8.11	99	54.878	ENSNBRG00000015060	si:ch211-113e8.11	99	56.504	Neolamprologus_brichardi
ENSTRUG00000023898	si:ch211-113e8.11	99	53.036	ENSORLG00000023699	si:ch211-113e8.11	99	53.036	Oryzias_latipes
ENSTRUG00000023898	si:ch211-113e8.11	99	52.419	ENSORLG00020022094	si:ch211-113e8.11	99	52.419	Oryzias_latipes_hni
ENSTRUG00000023898	si:ch211-113e8.11	99	52.610	ENSORLG00015002588	si:ch211-113e8.11	99	52.610	Oryzias_latipes_hsok
ENSTRUG00000023898	si:ch211-113e8.11	99	53.279	ENSOMEG00000010624	si:ch211-113e8.11	99	53.279	Oryzias_melastigma
ENSTRUG00000023898	si:ch211-113e8.11	55	52.482	ENSPKIG00000023576	si:ch211-113e8.11	96	42.742	Paramormyrops_kingsleyae
ENSTRUG00000023898	si:ch211-113e8.11	96	51.709	ENSPMGG00000018547	si:ch211-113e8.11	97	52.564	Periophthalmus_magnuspinnatus
ENSTRUG00000023898	si:ch211-113e8.11	98	53.942	ENSPFOG00000007950	si:ch211-113e8.11	100	54.472	Poecilia_formosa
ENSTRUG00000023898	si:ch211-113e8.11	99	53.600	ENSPLAG00000002081	si:ch211-113e8.11	99	54.400	Poecilia_latipinna
ENSTRUG00000023898	si:ch211-113e8.11	99	53.200	ENSPMEG00000017505	si:ch211-113e8.11	99	54.510	Poecilia_mexicana
ENSTRUG00000023898	si:ch211-113e8.11	99	54.357	ENSPREG00000008530	si:ch211-113e8.11	99	53.815	Poecilia_reticulata
ENSTRUG00000023898	si:ch211-113e8.11	99	54.878	ENSPNYG00000022856	si:ch211-113e8.11	99	56.504	Pundamilia_nyererei
ENSTRUG00000023898	si:ch211-113e8.11	98	40.698	ENSPNAG00000013782	si:ch211-113e8.11	99	42.578	Pygocentrus_nattereri
ENSTRUG00000023898	si:ch211-113e8.11	98	46.025	ENSSFOG00015000959	si:ch211-113e8.11	97	43.933	Scleropages_formosus
ENSTRUG00000023898	si:ch211-113e8.11	99	55.777	ENSSMAG00000009732	si:ch211-113e8.11	99	56.746	Scophthalmus_maximus
ENSTRUG00000023898	si:ch211-113e8.11	99	56.863	ENSSDUG00000000112	si:ch211-113e8.11	99	56.863	Seriola_dumerili
ENSTRUG00000023898	si:ch211-113e8.11	99	57.422	ENSSLDG00000003287	si:ch211-113e8.11	99	57.422	Seriola_lalandi_dorsalis
ENSTRUG00000023898	si:ch211-113e8.11	99	57.812	ENSSPAG00000001375	si:ch211-113e8.11	99	58.203	Stegastes_partitus
ENSTRUG00000023898	si:ch211-113e8.11	99	53.200	ENSXMAG00000024104	si:ch211-113e8.11	99	53.012	Xiphophorus_maculatus