EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000023925 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 1446 bases
Position: chrHE594386.1:5638-7083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000047945	zf-C2H2	PF00096.26	2e-40	1	7
ENSTRUP00000047945	zf-C2H2	PF00096.26	2e-40	2	7
ENSTRUP00000047945	zf-C2H2	PF00096.26	2e-40	3	7
ENSTRUP00000047945	zf-C2H2	PF00096.26	2e-40	4	7
ENSTRUP00000047945	zf-C2H2	PF00096.26	2e-40	5	7
ENSTRUP00000047945	zf-C2H2	PF00096.26	2e-40	6	7
ENSTRUP00000047945	zf-C2H2	PF00096.26	2e-40	7	7
ENSTRUP00000047945	zf-met	PF12874.7	4.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057509	-	1446	-	ENSTRUP00000047945	438 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000023925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000023925	-	96	78.842	ENSTRUG00000021765	-	88	80.998
ENSTRUG00000023925	-	60	44.221	ENSTRUG00000022066	-	92	41.379
ENSTRUG00000023925	-	58	42.771	ENSTRUG00000023491	-	61	42.771
ENSTRUG00000023925	-	97	74.494	ENSTRUG00000007022	-	96	74.494
ENSTRUG00000023925	-	52	43.182	ENSTRUG00000019685	znf319b	83	43.182
ENSTRUG00000023925	-	60	48.592	ENSTRUG00000015687	-	92	45.312
ENSTRUG00000023925	-	58	35.714	ENSTRUG00000001452	PRDM15	53	35.714
ENSTRUG00000023925	-	61	39.683	ENSTRUG00000025597	znf646	76	39.683
ENSTRUG00000023925	-	96	65.833	ENSTRUG00000000995	-	90	71.462
ENSTRUG00000023925	-	68	43.836	ENSTRUG00000005321	-	96	45.274
ENSTRUG00000023925	-	51	41.964	ENSTRUG00000003454	-	67	41.964
ENSTRUG00000023925	-	59	46.193	ENSTRUG00000021675	-	78	46.193
ENSTRUG00000023925	-	96	88.889	ENSTRUG00000022515	-	87	88.889
ENSTRUG00000023925	-	60	39.189	ENSTRUG00000014476	-	81	39.189
ENSTRUG00000023925	-	52	39.899	ENSTRUG00000012157	-	87	39.899
ENSTRUG00000023925	-	52	48.731	ENSTRUG00000019940	-	51	48.276
ENSTRUG00000023925	-	70	43.523	ENSTRUG00000024073	-	75	43.523
ENSTRUG00000023925	-	91	54.040	ENSTRUG00000019483	-	98	54.040
ENSTRUG00000023925	-	69	39.344	ENSTRUG00000009203	zbtb41	56	39.344
ENSTRUG00000023925	-	60	43.523	ENSTRUG00000003277	zbtb17	91	46.000
ENSTRUG00000023925	-	58	45.912	ENSTRUG00000022843	-	64	45.912
ENSTRUG00000023925	-	59	46.569	ENSTRUG00000022076	-	85	46.569
ENSTRUG00000023925	-	58	44.379	ENSTRUG00000013850	prdm5	72	44.379
ENSTRUG00000023925	-	96	73.759	ENSTRUG00000022206	-	81	73.759
ENSTRUG00000023925	-	97	54.680	ENSTRUG00000012273	-	93	54.680
ENSTRUG00000023925	-	96	73.286	ENSTRUG00000001268	-	97	66.205
ENSTRUG00000023925	-	69	77.815	ENSTRUG00000022919	-	83	77.815
ENSTRUG00000023925	-	71	77.184	ENSTRUG00000013906	-	92	77.184
ENSTRUG00000023925	-	96	48.148	ENSTRUG00000020582	-	84	50.495
ENSTRUG00000023925	-	61	42.735	ENSTRUG00000004525	gfi1b	54	42.735
ENSTRUG00000023925	-	63	43.781	ENSTRUG00000005880	-	61	43.781
ENSTRUG00000023925	-	91	47.345	ENSTRUG00000006896	-	86	47.345
ENSTRUG00000023925	-	96	72.103	ENSTRUG00000020208	-	98	72.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023925	-	51	53.398	ENSAPOG00000005767	-	100	53.398	Acanthochromis_polyacanthus
ENSTRUG00000023925	-	91	47.917	ENSAOCG00000000570	-	97	47.917	Amphiprion_ocellaris
ENSTRUG00000023925	-	90	50.568	ENSAPEG00000018796	-	93	50.568	Amphiprion_percula
ENSTRUG00000023925	-	59	39.000	ENSCVAG00000018507	-	73	42.929	Cyprinodon_variegatus
ENSTRUG00000023925	-	59	42.929	ENSFHEG00000022534	-	78	42.929	Fundulus_heteroclitus
ENSTRUG00000023925	-	90	47.396	ENSKMAG00000013745	-	95	47.396	Kryptolebias_marmoratus
ENSTRUG00000023925	-	59	43.299	ENSMAMG00000009817	-	70	45.833	Mastacembelus_armatus
ENSTRUG00000023925	-	96	47.810	ENSMAMG00000018114	-	82	55.670	Mastacembelus_armatus
ENSTRUG00000023925	-	68	50.000	ENSMZEG00005016808	-	86	54.237	Maylandia_zebra
ENSTRUG00000023925	-	74	59.694	ENSMALG00000004579	-	93	60.638	Monopterus_albus
ENSTRUG00000023925	-	66	57.843	ENSMALG00000001085	-	97	57.843	Monopterus_albus
ENSTRUG00000023925	-	91	53.846	ENSMALG00000012757	-	91	53.846	Monopterus_albus
ENSTRUG00000023925	-	95	52.525	ENSMALG00000008930	-	96	44.978	Monopterus_albus
ENSTRUG00000023925	-	86	53.488	ENSNBRG00000013501	-	97	53.488	Neolamprologus_brichardi
ENSTRUG00000023925	-	69	43.885	ENSOMEG00000021420	-	67	44.388	Oryzias_melastigma
ENSTRUG00000023925	-	59	39.899	ENSPREG00000014898	-	62	39.899	Poecilia_reticulata
ENSTRUG00000023925	-	60	45.856	ENSPNYG00000007756	-	75	48.276	Pundamilia_nyererei
ENSTRUG00000023925	-	60	55.172	ENSSDUG00000001263	-	85	55.172	Seriola_dumerili
ENSTRUG00000023925	-	51	43.216	ENSSLDG00000023661	-	85	43.216	Seriola_lalandi_dorsalis
ENSTRUG00000023925	-	59	54.369	ENSTNIG00000005856	-	99	54.369	Tetraodon_nigroviridis
ENSTRUG00000023925	-	59	51.656	ENSXCOG00000019492	-	93	51.656	Xiphophorus_couchianus
ENSTRUG00000023925	-	59	53.205	ENSXMAG00000022297	-	99	51.471	Xiphophorus_maculatus