EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000023976 (Gene tree)
Gene ID: 101073110
Gene Symbol: snrpd3l
Alias: wu:fa18f04|zgc:56125
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2939 bases
Position: chrHE593215.1:21-2959
Accession: 101073110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054993	LSM	PF01423.22	9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000049930	-	733	XM_003979407	ENSTRUP00000054993	118 (aa)	XP_003979456	UPI0005D22F80

Gene Model

Click here to download ENSTRUG00000023976's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000023976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000023976	snrpd3l	86	32.039	ENSTRUG00000021737	lsm4	80	30.702
ENSTRUG00000023976	snrpd3l	60	33.803	ENSTRUG00000008977	snrpd1	84	31.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000023976	snrpd3l	91	100.000	ENSG00000100028	SNRPD3	98	100.000	Homo_sapiens
ENSTRUG00000023976	snrpd3l	90	100.000	ENSAPOG00000007512	snrpd3l	83	100.000	Acanthochromis_polyacanthus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSAMEG00000013935	SNRPD3	84	100.000	Ailuropoda_melanoleuca
ENSTRUG00000023976	snrpd3l	90	100.000	ENSACIG00000008871	snrpd3l	83	100.000	Amphilophus_citrinellus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSAOCG00000008497	SNRPD3	83	100.000	Amphiprion_ocellaris
ENSTRUG00000023976	snrpd3l	90	100.000	ENSAOCG00000016743	snrpd3l	83	100.000	Amphiprion_ocellaris
ENSTRUG00000023976	snrpd3l	92	100.000	ENSAOCG00000016759	-	100	100.000	Amphiprion_ocellaris
ENSTRUG00000023976	snrpd3l	90	100.000	ENSAOCG00000022442	-	83	100.000	Amphiprion_ocellaris
ENSTRUG00000023976	snrpd3l	90	100.000	ENSAPEG00000006273	snrpd3l	83	100.000	Amphiprion_percula
ENSTRUG00000023976	snrpd3l	92	100.000	ENSAPEG00000006260	-	100	100.000	Amphiprion_percula
ENSTRUG00000023976	snrpd3l	90	100.000	ENSATEG00000020556	snrpd3l	76	100.000	Anabas_testudineus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSAPLG00000008670	SNRPD3	84	100.000	Anas_platyrhynchos
ENSTRUG00000023976	snrpd3l	91	100.000	ENSANAG00000026106	SNRPD3	90	100.000	Aotus_nancymaae
ENSTRUG00000023976	snrpd3l	90	100.000	ENSACLG00000021295	snrpd3l	83	100.000	Astatotilapia_calliptera
ENSTRUG00000023976	snrpd3l	90	98.113	ENSAMXG00000038984	snrpd3l	83	98.113	Astyanax_mexicanus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSBTAG00000021262	SNRPD3	84	100.000	Bos_taurus
ENSTRUG00000023976	snrpd3l	78	69.565	WBGene00004914	snr-1	68	69.565	Caenorhabditis_elegans
ENSTRUG00000023976	snrpd3l	91	100.000	ENSCJAG00000009630	SNRPD3	90	100.000	Callithrix_jacchus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCAFG00000013864	-	84	100.000	Canis_familiaris
ENSTRUG00000023976	snrpd3l	90	99.057	ENSCAFG00000017258	-	84	99.057	Canis_familiaris
ENSTRUG00000023976	snrpd3l	51	100.000	ENSCAFG00020024699	-	58	100.000	Canis_lupus_dingo
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCAFG00020007165	-	84	100.000	Canis_lupus_dingo
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCHIG00000000057	SNRPD3	84	100.000	Capra_hircus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSTSYG00000007649	SNRPD3	84	100.000	Carlito_syrichta
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCAPG00000016432	-	84	100.000	Cavia_aperea
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCPOG00000033102	-	84	100.000	Cavia_porcellus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCCAG00000035006	SNRPD3	84	100.000	Cebus_capucinus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCATG00000038878	SNRPD3	84	100.000	Cercocebus_atys
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCLAG00000011403	SNRPD3	84	100.000	Chinchilla_lanigera
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCSAG00000010694	SNRPD3	84	100.000	Chlorocebus_sabaeus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCPBG00000002065	SNRPD3	84	100.000	Chrysemys_picta_bellii
ENSTRUG00000023976	snrpd3l	90	79.245	ENSCSAVG00000004708	-	79	79.245	Ciona_savignyi
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCANG00000032106	SNRPD3	84	100.000	Colobus_angolensis_palliatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCGRG00001021990	Snrpd3	84	100.000	Cricetulus_griseus_chok1gshd
ENSTRUG00000023976	snrpd3l	90	100.000	ENSCGRG00000004280	Snrpd3	84	100.000	Cricetulus_griseus_crigri
ENSTRUG00000023976	snrpd3l	90	99.057	ENSCVAG00000001276	snrpd3l	83	99.057	Cyprinodon_variegatus
ENSTRUG00000023976	snrpd3l	90	96.226	ENSDARG00000013800	snrpd3	83	96.226	Danio_rerio
ENSTRUG00000023976	snrpd3l	90	98.113	ENSDARG00000076283	snrpd3l	83	98.113	Danio_rerio
ENSTRUG00000023976	snrpd3l	90	100.000	ENSDNOG00000047424	-	84	100.000	Dasypus_novemcinctus
ENSTRUG00000023976	snrpd3l	86	79.412	ENSDNOG00000042638	-	84	79.412	Dasypus_novemcinctus
ENSTRUG00000023976	snrpd3l	90	89.908	ENSDNOG00000018004	-	84	89.908	Dasypus_novemcinctus
ENSTRUG00000023976	snrpd3l	90	85.849	ENSDORG00000027706	-	84	85.849	Dipodomys_ordii
ENSTRUG00000023976	snrpd3l	76	93.333	ENSDORG00000002800	-	82	93.333	Dipodomys_ordii
ENSTRUG00000023976	snrpd3l	90	71.698	ENSDORG00000027169	-	81	71.698	Dipodomys_ordii
ENSTRUG00000023976	snrpd3l	90	83.962	FBgn0023167	SmD3	70	83.962	Drosophila_melanogaster
ENSTRUG00000023976	snrpd3l	90	100.000	ENSEASG00005000273	SNRPD3	84	100.000	Equus_asinus_asinus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSECAG00000023316	SNRPD3	84	100.000	Equus_caballus
ENSTRUG00000023976	snrpd3l	93	97.273	ENSEEUG00000015518	SNRPD3	88	97.273	Erinaceus_europaeus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSELUG00000010092	snrpd3l	83	100.000	Esox_lucius
ENSTRUG00000023976	snrpd3l	90	97.170	ENSELUG00000001854	snrpd3	83	97.170	Esox_lucius
ENSTRUG00000023976	snrpd3l	94	98.198	ENSFCAG00000001512	SNRPD3	93	98.198	Felis_catus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSFALG00000007303	SNRPD3	84	100.000	Ficedula_albicollis
ENSTRUG00000023976	snrpd3l	90	100.000	ENSFDAG00000010772	SNRPD3	84	100.000	Fukomys_damarensis
ENSTRUG00000023976	snrpd3l	90	100.000	ENSFHEG00000010754	snrpd3l	83	100.000	Fundulus_heteroclitus
ENSTRUG00000023976	snrpd3l	90	99.065	ENSGMOG00000008469	snrpd3l	84	99.065	Gadus_morhua
ENSTRUG00000023976	snrpd3l	90	100.000	ENSGALG00000006596	SNRPD3	84	100.000	Gallus_gallus
ENSTRUG00000023976	snrpd3l	94	99.099	ENSGAFG00000006661	snrpd3l	85	99.099	Gambusia_affinis
ENSTRUG00000023976	snrpd3l	90	99.065	ENSGACG00000017533	snrpd3l	84	99.065	Gasterosteus_aculeatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSGAGG00000023325	SNRPD3	84	100.000	Gopherus_agassizii
ENSTRUG00000023976	snrpd3l	90	100.000	ENSGGOG00000015640	SNRPD3	84	100.000	Gorilla_gorilla
ENSTRUG00000023976	snrpd3l	90	100.000	ENSHBUG00000001332	snrpd3l	83	100.000	Haplochromis_burtoni
ENSTRUG00000023976	snrpd3l	90	97.170	ENSHGLG00000009844	-	84	97.170	Heterocephalus_glaber_female
ENSTRUG00000023976	snrpd3l	90	100.000	ENSHGLG00000016496	SNRPD3	84	100.000	Heterocephalus_glaber_female
ENSTRUG00000023976	snrpd3l	90	97.170	ENSHGLG00100011326	-	84	97.170	Heterocephalus_glaber_male
ENSTRUG00000023976	snrpd3l	90	100.000	ENSHGLG00100019304	SNRPD3	84	100.000	Heterocephalus_glaber_male
ENSTRUG00000023976	snrpd3l	90	100.000	ENSHCOG00000014396	snrpd3l	83	100.000	Hippocampus_comes
ENSTRUG00000023976	snrpd3l	92	97.222	ENSIPUG00000003083	snrpd3	83	98.113	Ictalurus_punctatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSSTOG00000025674	SNRPD3	84	100.000	Ictidomys_tridecemlineatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSJJAG00000013303	Snrpd3	84	100.000	Jaculus_jaculus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSKMAG00000012493	snrpd3l	83	100.000	Kryptolebias_marmoratus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSLBEG00000003202	snrpd3l	83	100.000	Labrus_bergylta
ENSTRUG00000023976	snrpd3l	90	99.057	ENSLACG00000015192	SNRPD3	84	99.057	Latimeria_chalumnae
ENSTRUG00000023976	snrpd3l	90	100.000	ENSLOCG00000006978	snrpd3	89	100.000	Lepisosteus_oculatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSLAFG00000028180	SNRPD3	84	100.000	Loxodonta_africana
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMFAG00000033628	SNRPD3	84	100.000	Macaca_fascicularis
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMMUG00000000264	SNRPD3	84	100.000	Macaca_mulatta
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMNEG00000020857	SNRPD3	84	100.000	Macaca_nemestrina
ENSTRUG00000023976	snrpd3l	91	100.000	ENSMLEG00000037548	SNRPD3	89	100.000	Mandrillus_leucophaeus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMZEG00005017664	snrpd3l	83	100.000	Maylandia_zebra
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMAUG00000021393	Snrpd3	84	100.000	Mesocricetus_auratus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMICG00000034782	SNRPD3	84	100.000	Microcebus_murinus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMOCG00000009361	Snrpd3	84	100.000	Microtus_ochrogaster
ENSTRUG00000023976	snrpd3l	92	100.000	ENSMMOG00000020985	snrpd3l	68	100.000	Mola_mola
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMODG00000004024	SNRPD3	84	100.000	Monodelphis_domestica
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMALG00000013334	snrpd3l	83	100.000	Monopterus_albus
ENSTRUG00000023976	snrpd3l	90	100.000	MGP_CAROLIEiJ_G0015441	Snrpd3	84	100.000	Mus_caroli
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMUSG00000020180	Snrpd3	84	100.000	Mus_musculus
ENSTRUG00000023976	snrpd3l	90	100.000	MGP_PahariEiJ_G0030857	Snrpd3	84	100.000	Mus_pahari
ENSTRUG00000023976	snrpd3l	90	100.000	MGP_SPRETEiJ_G0016254	Snrpd3	84	100.000	Mus_spretus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMPUG00000002889	SNRPD3	84	100.000	Mustela_putorius_furo
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMLUG00000009838	SNRPD3	84	100.000	Myotis_lucifugus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSNGAG00000010328	Snrpd3	84	100.000	Nannospalax_galili
ENSTRUG00000023976	snrpd3l	90	100.000	ENSNBRG00000020307	snrpd3l	83	100.000	Neolamprologus_brichardi
ENSTRUG00000023976	snrpd3l	90	100.000	ENSNLEG00000035757	SNRPD3	84	100.000	Nomascus_leucogenys
ENSTRUG00000023976	snrpd3l	90	100.000	ENSMEUG00000003772	SNRPD3	84	100.000	Notamacropus_eugenii
ENSTRUG00000023976	snrpd3l	90	100.000	ENSOPRG00000005763	SNRPD3	84	100.000	Ochotona_princeps
ENSTRUG00000023976	snrpd3l	90	96.226	ENSODEG00000020162	-	84	96.226	Octodon_degus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSODEG00000008064	-	84	100.000	Octodon_degus
ENSTRUG00000023976	snrpd3l	90	99.057	ENSODEG00000019354	-	84	99.057	Octodon_degus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSONIG00000003828	snrpd3l	83	100.000	Oreochromis_niloticus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSOANG00000002463	SNRPD3	84	100.000	Ornithorhynchus_anatinus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSOCUG00000004845	SNRPD3	84	100.000	Oryctolagus_cuniculus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSORLG00000010586	snrpd3l	83	100.000	Oryzias_latipes
ENSTRUG00000023976	snrpd3l	90	100.000	ENSORLG00020011769	snrpd3l	83	100.000	Oryzias_latipes_hni
ENSTRUG00000023976	snrpd3l	90	100.000	ENSORLG00015022940	snrpd3l	83	100.000	Oryzias_latipes_hsok
ENSTRUG00000023976	snrpd3l	94	98.198	ENSOMEG00000022734	snrpd3l	83	100.000	Oryzias_melastigma
ENSTRUG00000023976	snrpd3l	91	100.000	ENSOGAG00000012708	SNRPD3	84	100.000	Otolemur_garnettii
ENSTRUG00000023976	snrpd3l	90	100.000	ENSOARG00000013984	SNRPD3	84	100.000	Ovis_aries
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPPAG00000039191	SNRPD3	84	100.000	Pan_paniscus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPPRG00000001470	SNRPD3	84	100.000	Panthera_pardus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPTIG00000016610	SNRPD3	84	100.000	Panthera_tigris_altaica
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPTRG00000014176	SNRPD3	84	100.000	Pan_troglodytes
ENSTRUG00000023976	snrpd3l	91	100.000	ENSPANG00000009279	SNRPD3	89	100.000	Papio_anubis
ENSTRUG00000023976	snrpd3l	90	98.113	ENSPKIG00000006412	snrpd3l	83	98.113	Paramormyrops_kingsleyae
ENSTRUG00000023976	snrpd3l	90	98.113	ENSPSIG00000010022	-	84	98.113	Pelodiscus_sinensis
ENSTRUG00000023976	snrpd3l	93	97.273	ENSPMGG00000004486	snrpd3l	89	97.273	Periophthalmus_magnuspinnatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPCIG00000010910	SNRPD3	71	100.000	Phascolarctos_cinereus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPFOG00000019673	snrpd3l	83	100.000	Poecilia_formosa
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPLAG00000023249	snrpd3l	83	100.000	Poecilia_latipinna
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPMEG00000008482	snrpd3l	83	100.000	Poecilia_mexicana
ENSTRUG00000023976	snrpd3l	92	100.000	ENSPREG00000007532	snrpd3l	89	100.000	Poecilia_reticulata
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPPYG00000011648	SNRPD3	84	100.000	Pongo_abelii
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPCAG00000002065	SNRPD3	84	100.000	Procavia_capensis
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPCOG00000011842	SNRPD3	84	100.000	Propithecus_coquereli
ENSTRUG00000023976	snrpd3l	90	99.057	ENSPVAG00000011405	SNRPD3	84	99.057	Pteropus_vampyrus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSPNYG00000013344	snrpd3l	83	100.000	Pundamilia_nyererei
ENSTRUG00000023976	snrpd3l	90	97.170	ENSPNAG00000008683	snrpd3l	83	97.170	Pygocentrus_nattereri
ENSTRUG00000023976	snrpd3l	90	96.226	ENSPNAG00000010547	snrpd3	83	96.226	Pygocentrus_nattereri
ENSTRUG00000023976	snrpd3l	90	100.000	ENSRNOG00000050410	Snrpd3	84	100.000	Rattus_norvegicus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSRBIG00000029017	SNRPD3	84	100.000	Rhinopithecus_bieti
ENSTRUG00000023976	snrpd3l	90	100.000	ENSRROG00000031152	SNRPD3	84	100.000	Rhinopithecus_roxellana
ENSTRUG00000023976	snrpd3l	81	47.368	YLR147C	SMD3	92	47.368	Saccharomyces_cerevisiae
ENSTRUG00000023976	snrpd3l	90	97.170	ENSSFOG00015014180	snrpd3l	83	97.170	Scleropages_formosus
ENSTRUG00000023976	snrpd3l	90	98.113	ENSSFOG00015007002	snrpd3l	83	98.113	Scleropages_formosus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSSMAG00000019307	snrpd3l	83	100.000	Scophthalmus_maximus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSSDUG00000006870	snrpd3l	83	100.000	Seriola_dumerili
ENSTRUG00000023976	snrpd3l	90	100.000	ENSSLDG00000022664	snrpd3l	83	100.000	Seriola_lalandi_dorsalis
ENSTRUG00000023976	snrpd3l	90	100.000	ENSSARG00000002357	SNRPD3	84	100.000	Sorex_araneus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSSPUG00000014285	SNRPD3	84	100.000	Sphenodon_punctatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSSSCG00000010058	SNRPD3	84	100.000	Sus_scrofa
ENSTRUG00000023976	snrpd3l	90	100.000	ENSTGUG00000010079	SNRPD3	84	100.000	Taeniopygia_guttata
ENSTRUG00000023976	snrpd3l	90	100.000	ENSTNIG00000005323	snrpd3l	83	100.000	Tetraodon_nigroviridis
ENSTRUG00000023976	snrpd3l	90	100.000	ENSTBEG00000014334	SNRPD3	84	100.000	Tupaia_belangeri
ENSTRUG00000023976	snrpd3l	90	100.000	ENSTTRG00000006022	SNRPD3	84	100.000	Tursiops_truncatus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSUAMG00000010767	SNRPD3	84	100.000	Ursus_americanus
ENSTRUG00000023976	snrpd3l	91	100.000	ENSUMAG00000001670	SNRPD3	84	100.000	Ursus_maritimus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSVPAG00000000241	SNRPD3	84	100.000	Vicugna_pacos
ENSTRUG00000023976	snrpd3l	91	100.000	ENSVVUG00000019340	SNRPD3	53	100.000	Vulpes_vulpes
ENSTRUG00000023976	snrpd3l	70	98.795	ENSXETG00000024918	snrpd3	65	98.795	Xenopus_tropicalis
ENSTRUG00000023976	snrpd3l	90	100.000	ENSXCOG00000004795	snrpd3l	83	100.000	Xiphophorus_couchianus
ENSTRUG00000023976	snrpd3l	90	100.000	ENSXMAG00000001133	snrpd3l	83	100.000	Xiphophorus_maculatus