EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024003 (Gene tree)
Gene ID: 101078706
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 7536 bases
Position: chr15:7844260-7851795
Accession: 101078706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000055004	Nucleoplasmin	PF03066.15	5e-32	1	1
ENSTRUP00000055343	Nucleoplasmin	PF03066.15	4.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053178	-	5428	XM_011611463	ENSTRUP00000055004	302 (aa)	XP_011609765	-
ENSTRUT00000052897	-	5458	-	ENSTRUP00000055343	312 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000024003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024003	npm1a	96	39.519	ENSTRUG00000008105	npm1b	91	39.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024003	npm1a	100	76.238	ENSAPOG00000002813	npm1a	100	75.908	Acanthochromis_polyacanthus
ENSTRUG00000024003	npm1a	94	72.414	ENSACIG00000014201	npm1a	100	72.759	Amphilophus_citrinellus
ENSTRUG00000024003	npm1a	89	67.037	ENSAOCG00000004978	npm1a	99	65.428	Amphiprion_ocellaris
ENSTRUG00000024003	npm1a	100	76.238	ENSAPEG00000008594	npm1a	100	75.908	Amphiprion_percula
ENSTRUG00000024003	npm1a	100	78.205	ENSATEG00000008885	npm1a	99	78.247	Anabas_testudineus
ENSTRUG00000024003	npm1a	97	69.595	ENSACLG00000008376	npm1a	96	69.625	Astatotilapia_calliptera
ENSTRUG00000024003	npm1a	98	55.219	ENSAMXG00000010155	npm1a	99	56.902	Astyanax_mexicanus
ENSTRUG00000024003	npm1a	100	60.927	ENSCSEG00000011165	npm1a	100	81.935	Cynoglossus_semilaevis
ENSTRUG00000024003	npm1a	100	71.287	ENSCVAG00000008960	npm1a	100	71.287	Cyprinodon_variegatus
ENSTRUG00000024003	npm1a	98	64.189	ENSDARG00000014329	npm1a	95	71.975	Danio_rerio
ENSTRUG00000024003	npm1a	95	38.298	ENSEBUG00000012753	npm1a	91	37.690	Eptatretus_burgeri
ENSTRUG00000024003	npm1a	100	66.013	ENSELUG00000013705	npm1a	100	66.013	Esox_lucius
ENSTRUG00000024003	npm1a	100	71.947	ENSFHEG00000012496	npm1a	100	72.078	Fundulus_heteroclitus
ENSTRUG00000024003	npm1a	100	65.260	ENSGAFG00000013059	npm1a	100	64.286	Gambusia_affinis
ENSTRUG00000024003	npm1a	99	66.557	ENSGACG00000020319	npm1a	99	66.333	Gasterosteus_aculeatus
ENSTRUG00000024003	npm1a	99	74.528	ENSHBUG00000000776	npm1a	100	74.528	Haplochromis_burtoni
ENSTRUG00000024003	npm1a	100	60.323	ENSHCOG00000001059	npm1a	100	59.677	Hippocampus_comes
ENSTRUG00000024003	npm1a	98	61.842	ENSIPUG00000019452	npm1	99	61.184	Ictalurus_punctatus
ENSTRUG00000024003	npm1a	100	72.517	ENSKMAG00000010709	npm1a	100	71.854	Kryptolebias_marmoratus
ENSTRUG00000024003	npm1a	100	72.277	ENSLBEG00000008793	npm1a	100	71.287	Labrus_bergylta
ENSTRUG00000024003	npm1a	85	58.029	ENSLOCG00000009683	npm1a	100	58.029	Lepisosteus_oculatus
ENSTRUG00000024003	npm1a	100	77.228	ENSMAMG00000009344	npm1a	83	76.568	Mastacembelus_armatus
ENSTRUG00000024003	npm1a	99	74.132	ENSMZEG00005013717	npm1a	100	74.448	Maylandia_zebra
ENSTRUG00000024003	npm1a	95	76.389	ENSMMOG00000007980	npm1a	100	77.083	Mola_mola
ENSTRUG00000024003	npm1a	100	73.355	ENSMALG00000001146	npm1a	100	75.000	Monopterus_albus
ENSTRUG00000024003	npm1a	99	68.966	ENSNBRG00000013172	npm1a	100	68.966	Neolamprologus_brichardi
ENSTRUG00000024003	npm1a	99	72.425	ENSONIG00000001860	npm1a	98	72.425	Oreochromis_niloticus
ENSTRUG00000024003	npm1a	100	72.517	ENSORLG00000010179	npm1a	100	72.517	Oryzias_latipes
ENSTRUG00000024003	npm1a	100	71.854	ENSORLG00020020817	npm1a	100	71.854	Oryzias_latipes_hni
ENSTRUG00000024003	npm1a	100	72.517	ENSORLG00015003439	npm1a	100	72.517	Oryzias_latipes_hsok
ENSTRUG00000024003	npm1a	100	71.854	ENSOMEG00000007083	npm1a	100	71.854	Oryzias_melastigma
ENSTRUG00000024003	npm1a	100	58.824	ENSPKIG00000023943	npm1a	100	58.170	Paramormyrops_kingsleyae
ENSTRUG00000024003	npm1a	100	56.291	ENSPMGG00000011716	npm1a	100	58.278	Periophthalmus_magnuspinnatus
ENSTRUG00000024003	npm1a	100	68.506	ENSPFOG00000019173	npm1a	100	67.532	Poecilia_formosa
ENSTRUG00000024003	npm1a	100	68.608	ENSPLAG00000001093	npm1a	100	68.285	Poecilia_latipinna
ENSTRUG00000024003	npm1a	100	68.506	ENSPMEG00000012523	npm1a	100	67.532	Poecilia_mexicana
ENSTRUG00000024003	npm1a	100	68.317	ENSPREG00000001647	npm1a	100	67.857	Poecilia_reticulata
ENSTRUG00000024003	npm1a	99	74.441	ENSPNYG00000019321	npm1a	100	74.441	Pundamilia_nyererei
ENSTRUG00000024003	npm1a	98	61.311	ENSPNAG00000026891	npm1a	99	62.745	Pygocentrus_nattereri
ENSTRUG00000024003	npm1a	100	60.586	ENSSFOG00015007074	npm1a	100	60.586	Scleropages_formosus
ENSTRUG00000024003	npm1a	100	76.471	ENSSMAG00000019090	npm1a	100	76.144	Scophthalmus_maximus
ENSTRUG00000024003	npm1a	100	76.238	ENSSDUG00000015609	npm1a	100	76.568	Seriola_dumerili
ENSTRUG00000024003	npm1a	100	76.898	ENSSLDG00000017849	npm1a	100	76.568	Seriola_lalandi_dorsalis
ENSTRUG00000024003	npm1a	96	57.047	ENSSPAG00000021660	npm1a	93	88.525	Stegastes_partitus
ENSTRUG00000024003	npm1a	100	79.868	ENSTNIG00000010773	npm1a	100	78.878	Tetraodon_nigroviridis
ENSTRUG00000024003	npm1a	99	62.667	ENSXCOG00000005958	npm1a	100	65.292	Xiphophorus_couchianus
ENSTRUG00000024003	npm1a	100	68.092	ENSXMAG00000000396	npm1a	100	68.285	Xiphophorus_maculatus