EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024009 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2071 bases
Position: chr12:7128178-7130248
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051381	zf-C2H2	PF00096.26	2.1e-13	1	2
ENSTRUP00000051381	zf-C2H2	PF00096.26	2.1e-13	2	2
ENSTRUP00000051381	zf-met	PF12874.7	5.9e-07	1	2
ENSTRUP00000051381	zf-met	PF12874.7	5.9e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000057577	-	868	-	ENSTRUP00000051381	248 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000024009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024009	-	99	51.948	ENSTRUG00000022076	-	80	51.948
ENSTRUG00000024009	-	99	56.667	ENSTRUG00000021167	-	99	54.839
ENSTRUG00000024009	-	100	48.780	ENSTRUG00000021765	-	98	48.780
ENSTRUG00000024009	-	100	44.444	ENSTRUG00000001268	-	100	44.444
ENSTRUG00000024009	-	98	49.091	ENSTRUG00000003454	-	81	49.091
ENSTRUG00000024009	-	69	46.988	ENSTRUG00000022066	-	78	48.529
ENSTRUG00000024009	-	93	51.020	ENSTRUG00000005321	-	94	49.351
ENSTRUG00000024009	-	100	46.988	ENSTRUG00000020582	-	99	46.988
ENSTRUG00000024009	-	74	46.341	ENSTRUG00000006896	-	91	46.341
ENSTRUG00000024009	-	100	54.878	ENSTRUG00000019483	-	97	54.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024009	-	100	47.561	ENSAPOG00000021966	-	99	47.561	Acanthochromis_polyacanthus
ENSTRUG00000024009	-	74	48.780	ENSACIG00000022738	-	91	53.659	Amphilophus_citrinellus
ENSTRUG00000024009	-	64	48.193	ENSACIG00000007096	-	96	48.193	Amphilophus_citrinellus
ENSTRUG00000024009	-	100	47.561	ENSAOCG00000022529	-	100	47.561	Amphiprion_ocellaris
ENSTRUG00000024009	-	94	30.672	ENSAOCG00000020652	-	96	30.672	Amphiprion_ocellaris
ENSTRUG00000024009	-	70	53.659	ENSAPEG00000008746	-	73	53.659	Amphiprion_percula
ENSTRUG00000024009	-	69	47.561	ENSAPEG00000009553	-	70	47.561	Amphiprion_percula
ENSTRUG00000024009	-	50	54.878	ENSATEG00000015238	-	62	54.878	Anabas_testudineus
ENSTRUG00000024009	-	100	53.012	ENSACLG00000008374	-	99	53.012	Astatotilapia_calliptera
ENSTRUG00000024009	-	65	47.561	ENSACLG00000015462	-	74	47.561	Astatotilapia_calliptera
ENSTRUG00000024009	-	78	48.101	ENSAMXG00000007973	-	88	49.180	Astyanax_mexicanus
ENSTRUG00000024009	-	100	33.681	ENSCVAG00000000161	-	97	33.681	Cyprinodon_variegatus
ENSTRUG00000024009	-	84	40.441	ENSFHEG00000013228	-	61	43.373	Fundulus_heteroclitus
ENSTRUG00000024009	-	79	50.442	ENSHBUG00000013065	-	81	50.442	Haplochromis_burtoni
ENSTRUG00000024009	-	100	53.012	ENSHBUG00000017924	-	99	53.012	Haplochromis_burtoni
ENSTRUG00000024009	-	75	47.561	ENSHBUG00000019377	-	79	47.561	Haplochromis_burtoni
ENSTRUG00000024009	-	99	52.564	ENSKMAG00000015304	-	87	52.564	Kryptolebias_marmoratus
ENSTRUG00000024009	-	100	30.169	ENSKMAG00000017903	-	98	30.169	Kryptolebias_marmoratus
ENSTRUG00000024009	-	65	48.529	ENSLBEG00000026457	-	88	48.529	Labrus_bergylta
ENSTRUG00000024009	-	100	45.783	ENSLBEG00000008850	-	99	45.783	Labrus_bergylta
ENSTRUG00000024009	-	100	53.012	ENSMZEG00005011431	-	99	53.012	Maylandia_zebra
ENSTRUG00000024009	-	65	47.561	ENSMZEG00005018502	-	74	47.561	Maylandia_zebra
ENSTRUG00000024009	-	99	43.939	ENSMALG00000012840	-	98	43.939	Monopterus_albus
ENSTRUG00000024009	-	51	50.000	ENSMALG00000010959	-	86	50.000	Monopterus_albus
ENSTRUG00000024009	-	98	50.602	ENSMALG00000005696	-	99	50.602	Monopterus_albus
ENSTRUG00000024009	-	100	53.012	ENSNBRG00000004792	-	99	53.012	Neolamprologus_brichardi
ENSTRUG00000024009	-	54	66.000	ENSPMGG00000011591	-	58	66.000	Periophthalmus_magnuspinnatus
ENSTRUG00000024009	-	97	36.546	ENSPMGG00000001672	-	93	33.846	Periophthalmus_magnuspinnatus
ENSTRUG00000024009	-	68	41.379	ENSPLAG00000011958	-	50	41.379	Poecilia_latipinna
ENSTRUG00000024009	-	68	41.379	ENSPMEG00000006760	-	50	41.379	Poecilia_mexicana
ENSTRUG00000024009	-	62	47.561	ENSPMEG00000022651	-	94	47.561	Poecilia_mexicana
ENSTRUG00000024009	-	65	50.442	ENSPNYG00000011024	-	86	50.442	Pundamilia_nyererei
ENSTRUG00000024009	-	100	53.012	ENSPNYG00000016157	-	99	53.012	Pundamilia_nyererei
ENSTRUG00000024009	-	100	42.169	ENSPNAG00000011705	-	91	42.169	Pygocentrus_nattereri
ENSTRUG00000024009	-	58	50.000	ENSSFOG00015006083	-	63	50.000	Scleropages_formosus
ENSTRUG00000024009	-	100	50.602	ENSSMAG00000006155	-	97	50.602	Scophthalmus_maximus
ENSTRUG00000024009	-	100	51.220	ENSSMAG00000013828	-	88	51.220	Scophthalmus_maximus
ENSTRUG00000024009	-	100	50.943	ENSSMAG00000006902	-	99	50.943	Scophthalmus_maximus
ENSTRUG00000024009	-	60	48.276	ENSSMAG00000013663	-	89	48.276	Scophthalmus_maximus
ENSTRUG00000024009	-	100	41.071	ENSSDUG00000022035	-	99	41.071	Seriola_dumerili
ENSTRUG00000024009	-	71	53.659	ENSSDUG00000015013	-	74	53.659	Seriola_dumerili
ENSTRUG00000024009	-	71	53.659	ENSSLDG00000021278	-	74	53.659	Seriola_lalandi_dorsalis
ENSTRUG00000024009	-	100	41.071	ENSSLDG00000025676	-	99	41.071	Seriola_lalandi_dorsalis
ENSTRUG00000024009	-	59	32.164	ENSXCOG00000012064	-	66	32.164	Xiphophorus_couchianus
ENSTRUG00000024009	-	68	42.105	ENSXMAG00000022894	-	74	42.105	Xiphophorus_maculatus
ENSTRUG00000024009	-	50	44.776	ENSXMAG00000025174	-	65	45.122	Xiphophorus_maculatus