EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024177 (Gene tree)
Gene ID: 101077332
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 5177 bases
Position: chr7:12893887-12899063
Accession: 101077332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000052936	MMR_HSR1	PF01926.23	8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052672	-	3065	XM_003966252	ENSTRUP00000052936	200 (aa)	XP_003966301	UPI0000365E74

Gene Model

Click here to download ENSTRUG00000024177's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024177	rab13	86	30.994	ENSTRUG00000012454	rabl2	74	30.994
ENSTRUG00000024177	rab13	80	43.293	ENSTRUG00000020335	rab33a	64	43.293
ENSTRUG00000024177	rab13	79	43.671	ENSTRUG00000009223	rab41	75	43.671
ENSTRUG00000024177	rab13	81	42.169	ENSTRUG00000018380	rab22a	83	42.169
ENSTRUG00000024177	rab13	96	35.233	ENSTRUG00000023449	kras	98	34.715
ENSTRUG00000024177	rab13	89	33.708	ENSTRUG00000017384	rras2	92	34.211
ENSTRUG00000024177	rab13	75	30.065	ENSTRUG00000018107	arl3	80	30.065
ENSTRUG00000024177	rab13	94	41.489	ENSTRUG00000014595	-	90	41.489
ENSTRUG00000024177	rab13	88	48.864	ENSTRUG00000025076	si:dkey-16l2.16	93	53.390
ENSTRUG00000024177	rab13	84	47.619	ENSTRUG00000003363	rab2a	83	48.408
ENSTRUG00000024177	rab13	88	37.430	ENSTRUG00000020093	-	86	37.430
ENSTRUG00000024177	rab13	77	35.065	ENSTRUG00000020012	rhebl1	83	35.065
ENSTRUG00000024177	rab13	94	36.318	ENSTRUG00000010393	-	78	36.318
ENSTRUG00000024177	rab13	88	35.795	ENSTRUG00000015697	rab23	90	35.638
ENSTRUG00000024177	rab13	77	36.364	ENSTRUG00000004902	rheb	83	36.364
ENSTRUG00000024177	rab13	96	35.417	ENSTRUG00000024825	hrasb	98	35.417
ENSTRUG00000024177	rab13	84	30.286	ENSTRUG00000023427	dnajc27	64	30.286
ENSTRUG00000024177	rab13	90	46.409	ENSTRUG00000004984	rab18a	88	46.409
ENSTRUG00000024177	rab13	72	38.514	ENSTRUG00000005937	rab34a	66	38.514
ENSTRUG00000024177	rab13	86	44.253	ENSTRUG00000025018	rab39bb	82	44.253
ENSTRUG00000024177	rab13	99	47.030	ENSTRUG00000020633	rab35b	100	47.030
ENSTRUG00000024177	rab13	88	53.714	ENSTRUG00000017824	rab15	82	53.714
ENSTRUG00000024177	rab13	82	40.476	ENSTRUG00000013963	RAB9A	83	40.476
ENSTRUG00000024177	rab13	88	37.430	ENSTRUG00000010082	RAB7A	86	37.430
ENSTRUG00000024177	rab13	81	31.792	ENSTRUG00000008651	rasl11a	67	31.792
ENSTRUG00000024177	rab13	79	44.937	ENSTRUG00000004881	rab6bb	76	44.937
ENSTRUG00000024177	rab13	86	50.581	ENSTRUG00000024455	rab12	71	50.581
ENSTRUG00000024177	rab13	62	30.645	ENSTRUG00000018668	-	60	30.645
ENSTRUG00000024177	rab13	98	32.161	ENSTRUG00000023011	rerg	95	32.161
ENSTRUG00000024177	rab13	84	42.012	ENSTRUG00000010224	rab42a	78	42.012
ENSTRUG00000024177	rab13	93	45.699	ENSTRUG00000020792	rab11a	87	45.699
ENSTRUG00000024177	rab13	80	30.488	ENSTRUG00000022489	rasd4	77	30.488
ENSTRUG00000024177	rab13	95	53.368	ENSTRUG00000023164	rab1ab	96	53.368
ENSTRUG00000024177	rab13	90	54.749	ENSTRUG00000004287	rab1ba	87	54.749
ENSTRUG00000024177	rab13	82	46.341	ENSTRUG00000004283	rab18b	93	41.361
ENSTRUG00000024177	rab13	79	44.937	ENSTRUG00000023252	rab6a	76	44.937
ENSTRUG00000024177	rab13	99	37.264	ENSTRUG00000009903	zgc:101559	90	37.264
ENSTRUG00000024177	rab13	90	56.983	ENSTRUG00000024994	RAB1A	87	56.983
ENSTRUG00000024177	rab13	87	34.286	ENSTRUG00000005805	mras	94	33.163
ENSTRUG00000024177	rab13	87	47.701	ENSTRUG00000022029	rab11bb	80	47.701
ENSTRUG00000024177	rab13	93	42.781	ENSTRUG00000007504	rab25b	90	42.781
ENSTRUG00000024177	rab13	79	43.038	ENSTRUG00000015590	rab5c	78	41.040
ENSTRUG00000024177	rab13	87	40.206	ENSTRUG00000007036	rab33ba	80	40.206
ENSTRUG00000024177	rab13	79	38.125	ENSTRUG00000014481	rab34b	65	38.125
ENSTRUG00000024177	rab13	87	47.399	ENSTRUG00000022559	rab30	85	47.399
ENSTRUG00000024177	rab13	66	30.075	ENSTRUG00000024749	-	91	30.075
ENSTRUG00000024177	rab13	98	43.415	ENSTRUG00000007556	rab11al	95	43.415
ENSTRUG00000024177	rab13	52	30.476	ENSTRUG00000005435	arl2	64	30.476
ENSTRUG00000024177	rab13	87	47.126	ENSTRUG00000021614	-	80	47.126
ENSTRUG00000024177	rab13	87	47.701	ENSTRUG00000021619	-	81	47.701
ENSTRUG00000024177	rab13	95	39.583	ENSTRUG00000024368	rab5aa	89	39.583
ENSTRUG00000024177	rab13	78	40.000	ENSTRUG00000008698	rab9a	79	40.000
ENSTRUG00000024177	rab13	88	53.714	ENSTRUG00000014783	RAB15	83	53.714
ENSTRUG00000024177	rab13	82	31.902	ENSTRUG00000013749	ran	74	31.902
ENSTRUG00000024177	rab13	97	37.981	ENSTRUG00000011399	-	97	37.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024177	rab13	99	76.733	ENSG00000143545	RAB13	99	76.733	Homo_sapiens
ENSTRUG00000024177	rab13	91	95.604	ENSACIG00000008584	rab13	88	95.604	Amphilophus_citrinellus
ENSTRUG00000024177	rab13	99	76.961	ENSANAG00000030247	-	99	76.961	Aotus_nancymaae
ENSTRUG00000024177	rab13	100	93.069	ENSAMXG00000030712	rab13	100	93.069	Astyanax_mexicanus
ENSTRUG00000024177	rab13	99	75.980	ENSBTAG00000017604	RAB13	99	75.980	Bos_taurus
ENSTRUG00000024177	rab13	81	48.148	WBGene00019317	K02E10.1	74	48.148	Caenorhabditis_elegans
ENSTRUG00000024177	rab13	89	84.181	ENSCJAG00000009933	-	99	75.980	Callithrix_jacchus
ENSTRUG00000024177	rab13	99	75.980	ENSCHIG00000022271	-	99	75.980	Capra_hircus
ENSTRUG00000024177	rab13	99	76.733	ENSCPOG00000011491	-	99	76.733	Cavia_porcellus
ENSTRUG00000024177	rab13	99	76.733	ENSCCAG00000028502	-	99	76.733	Cebus_capucinus
ENSTRUG00000024177	rab13	99	76.733	ENSCATG00000041779	-	99	76.733	Cercocebus_atys
ENSTRUG00000024177	rab13	99	76.238	ENSCLAG00000006603	-	99	76.238	Chinchilla_lanigera
ENSTRUG00000024177	rab13	99	76.733	ENSCANG00000036573	-	99	76.733	Colobus_angolensis_palliatus
ENSTRUG00000024177	rab13	99	75.490	ENSCGRG00001021505	Rab13	99	75.490	Cricetulus_griseus_chok1gshd
ENSTRUG00000024177	rab13	99	75.490	ENSCGRG00000012126	Rab13	99	75.490	Cricetulus_griseus_crigri
ENSTRUG00000024177	rab13	100	94.500	ENSCSEG00000002358	rab13	100	94.500	Cynoglossus_semilaevis
ENSTRUG00000024177	rab13	100	92.000	ENSDARG00000034771	rab13	100	92.000	Danio_rerio
ENSTRUG00000024177	rab13	99	78.218	ENSDORG00000001591	Rab13	99	78.218	Dipodomys_ordii
ENSTRUG00000024177	rab13	99	76.733	ENSEASG00005000683	-	99	76.733	Equus_asinus_asinus
ENSTRUG00000024177	rab13	99	76.733	ENSECAG00000016551	RAB13	99	76.733	Equus_caballus
ENSTRUG00000024177	rab13	100	73.892	ENSEEUG00000001233	-	100	73.892	Erinaceus_europaeus
ENSTRUG00000024177	rab13	100	91.500	ENSELUG00000012801	rab13	100	91.500	Esox_lucius
ENSTRUG00000024177	rab13	99	75.490	ENSFCAG00000045269	-	99	75.490	Felis_catus
ENSTRUG00000024177	rab13	66	90.076	ENSFDAG00000014469	-	99	90.076	Fukomys_damarensis
ENSTRUG00000024177	rab13	100	91.500	ENSFHEG00000021221	rab13	96	96.023	Fundulus_heteroclitus
ENSTRUG00000024177	rab13	100	96.500	ENSGACG00000011925	rab13	99	96.500	Gasterosteus_aculeatus
ENSTRUG00000024177	rab13	91	82.514	ENSGAGG00000000742	-	100	78.218	Gopherus_agassizii
ENSTRUG00000024177	rab13	99	76.733	ENSGGOG00000023693	RAB13	99	76.733	Gorilla_gorilla
ENSTRUG00000024177	rab13	99	75.622	ENSHGLG00000008749	RAB13	99	75.622	Heterocephalus_glaber_female
ENSTRUG00000024177	rab13	99	75.622	ENSHGLG00100013608	RAB13	99	75.622	Heterocephalus_glaber_male
ENSTRUG00000024177	rab13	100	90.000	ENSHCOG00000007440	rab13	97	97.727	Hippocampus_comes
ENSTRUG00000024177	rab13	100	89.552	ENSIPUG00000003199	rab13	100	89.552	Ictalurus_punctatus
ENSTRUG00000024177	rab13	99	76.471	ENSSTOG00000011222	-	99	76.471	Ictidomys_tridecemlineatus
ENSTRUG00000024177	rab13	99	77.228	ENSJJAG00000010575	Rab13	99	77.228	Jaculus_jaculus
ENSTRUG00000024177	rab13	100	91.500	ENSKMAG00000001908	rab13	100	91.500	Kryptolebias_marmoratus
ENSTRUG00000024177	rab13	100	95.500	ENSLBEG00000026779	rab13	100	95.500	Labrus_bergylta
ENSTRUG00000024177	rab13	89	76.271	ENSLACG00000008103	-	99	76.271	Latimeria_chalumnae
ENSTRUG00000024177	rab13	99	76.733	ENSMFAG00000041018	RAB13	99	76.733	Macaca_fascicularis
ENSTRUG00000024177	rab13	99	76.733	ENSMNEG00000028951	-	99	76.733	Macaca_nemestrina
ENSTRUG00000024177	rab13	99	76.733	ENSMLEG00000042247	-	99	76.733	Mandrillus_leucophaeus
ENSTRUG00000024177	rab13	100	95.500	ENSMAMG00000014602	rab13	100	95.500	Mastacembelus_armatus
ENSTRUG00000024177	rab13	99	75.490	ENSMAUG00000015713	Rab13	99	75.490	Mesocricetus_auratus
ENSTRUG00000024177	rab13	99	77.612	ENSMICG00000010340	-	99	77.612	Microcebus_murinus
ENSTRUG00000024177	rab13	99	76.733	ENSMOCG00000021448	Rab13	99	76.733	Microtus_ochrogaster
ENSTRUG00000024177	rab13	99	78.818	ENSMODG00000017295	-	84	78.818	Monodelphis_domestica
ENSTRUG00000024177	rab13	99	75.743	MGP_CAROLIEiJ_G0025227	Rab13	99	75.743	Mus_caroli
ENSTRUG00000024177	rab13	99	76.119	ENSMUSG00000027935	Rab13	99	76.119	Mus_musculus
ENSTRUG00000024177	rab13	100	74.634	MGP_PahariEiJ_G0026671	Rab13	100	74.634	Mus_pahari
ENSTRUG00000024177	rab13	99	77.340	ENSNGAG00000010309	Rab13	99	77.340	Nannospalax_galili
ENSTRUG00000024177	rab13	100	95.000	ENSNBRG00000004124	rab13	100	95.000	Neolamprologus_brichardi
ENSTRUG00000024177	rab13	99	76.733	ENSNLEG00000028944	-	99	76.733	Nomascus_leucogenys
ENSTRUG00000024177	rab13	99	79.208	ENSMEUG00000009667	-	99	79.208	Notamacropus_eugenii
ENSTRUG00000024177	rab13	99	76.238	ENSODEG00000010443	-	99	76.238	Octodon_degus
ENSTRUG00000024177	rab13	64	89.764	ENSODEG00000012634	-	100	89.764	Octodon_degus
ENSTRUG00000024177	rab13	100	90.594	ENSONIG00000006340	rab13	100	90.594	Oreochromis_niloticus
ENSTRUG00000024177	rab13	89	83.616	ENSOCUG00000006286	-	99	83.616	Oryctolagus_cuniculus
ENSTRUG00000024177	rab13	100	95.500	ENSOMEG00000008210	rab13	100	95.500	Oryzias_melastigma
ENSTRUG00000024177	rab13	99	76.000	ENSOGAG00000016969	-	99	76.000	Otolemur_garnettii
ENSTRUG00000024177	rab13	99	76.733	ENSPPAG00000028435	-	99	76.733	Pan_paniscus
ENSTRUG00000024177	rab13	99	75.490	ENSPPRG00000008865	-	99	75.490	Panthera_pardus
ENSTRUG00000024177	rab13	99	76.733	ENSPTRG00000001370	RAB13	99	76.733	Pan_troglodytes
ENSTRUG00000024177	rab13	99	76.733	ENSPANG00000004479	-	99	76.733	Papio_anubis
ENSTRUG00000024177	rab13	100	95.000	ENSPMGG00000007680	rab13	100	95.000	Periophthalmus_magnuspinnatus
ENSTRUG00000024177	rab13	58	86.087	ENSPEMG00000017353	-	86	86.087	Peromyscus_maniculatus_bairdii
ENSTRUG00000024177	rab13	99	79.208	ENSPCIG00000029350	-	99	79.208	Phascolarctos_cinereus
ENSTRUG00000024177	rab13	89	94.915	ENSPLAG00000005832	RAB13	95	94.915	Poecilia_latipinna
ENSTRUG00000024177	rab13	100	92.500	ENSPREG00000017567	rab13	100	92.500	Poecilia_reticulata
ENSTRUG00000024177	rab13	99	76.733	ENSPPYG00000000790	-	99	76.733	Pongo_abelii
ENSTRUG00000024177	rab13	99	78.109	ENSPCOG00000012189	-	99	78.109	Propithecus_coquereli
ENSTRUG00000024177	rab13	99	77.114	ENSPVAG00000011095	-	99	77.114	Pteropus_vampyrus
ENSTRUG00000024177	rab13	89	96.045	ENSPNAG00000004189	rab13	94	96.045	Pygocentrus_nattereri
ENSTRUG00000024177	rab13	99	75.000	ENSRNOG00000016733	Rab13	99	75.000	Rattus_norvegicus
ENSTRUG00000024177	rab13	99	76.733	ENSRBIG00000008552	-	99	76.733	Rhinopithecus_bieti
ENSTRUG00000024177	rab13	99	76.733	ENSRROG00000036885	-	99	76.733	Rhinopithecus_roxellana
ENSTRUG00000024177	rab13	99	77.612	ENSSBOG00000020342	-	99	77.612	Saimiri_boliviensis_boliviensis
ENSTRUG00000024177	rab13	99	79.208	ENSSHAG00000011866	-	99	79.208	Sarcophilus_harrisii
ENSTRUG00000024177	rab13	99	76.238	ENSSSCG00000006564	-	99	76.238	Sus_scrofa
ENSTRUG00000024177	rab13	99	78.218	ENSTBEG00000012734	-	99	78.218	Tupaia_belangeri
ENSTRUG00000024177	rab13	99	75.980	ENSTTRG00000011183	-	99	75.980	Tursiops_truncatus
ENSTRUG00000024177	rab13	69	78.986	ENSXETG00000020729	rab13	100	72.500	Xenopus_tropicalis
ENSTRUG00000024177	rab13	89	93.785	ENSXCOG00000019533	rab13	95	93.785	Xiphophorus_couchianus