EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000024350 (Gene tree)
Gene ID: 101069501
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 24834 bases
Position: chr3:1158541-1183374
Accession: 101069501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054464	RRM_5	PF13893.6	8.6e-08	1	2
ENSTRUP00000054464	RRM_5	PF13893.6	8.6e-08	2	2
ENSTRUP00000054464	RRM_1	PF00076.22	1e-40	1	3
ENSTRUP00000054464	RRM_1	PF00076.22	1e-40	2	3
ENSTRUP00000054464	RRM_1	PF00076.22	1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000050110	-	14092	XM_011621278	ENSTRUP00000054464	3518 (aa)	XP_011619580	UPI0005D23735

Gene Model

Click here to download ENSTRUG00000024350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024350	-	90	48.366	ENSG00000065526	SPEN	85	91.270	Homo_sapiens
ENSTRUG00000024350	-	97	79.121	ENSAPOG00000011411	si:ch1073-335m2.2	99	79.121	Acanthochromis_polyacanthus
ENSTRUG00000024350	-	100	76.447	ENSAPOG00000009853	-	87	96.067	Acanthochromis_polyacanthus
ENSTRUG00000024350	-	70	56.649	ENSAMEG00000011817	SPEN	96	44.203	Ailuropoda_melanoleuca
ENSTRUG00000024350	-	86	73.288	ENSAOCG00000008077	si:ch1073-335m2.2	99	73.288	Amphiprion_ocellaris
ENSTRUG00000024350	-	100	76.406	ENSAOCG00000014505	-	100	76.547	Amphiprion_ocellaris
ENSTRUG00000024350	-	98	79.121	ENSAPEG00000013515	si:ch1073-335m2.2	100	79.121	Amphiprion_percula
ENSTRUG00000024350	-	100	76.356	ENSAPEG00000010288	-	100	76.497	Amphiprion_percula
ENSTRUG00000024350	-	100	76.054	ENSATEG00000005627	-	100	76.279	Anabas_testudineus
ENSTRUG00000024350	-	97	78.689	ENSATEG00000007674	si:ch1073-335m2.2	99	78.689	Anabas_testudineus
ENSTRUG00000024350	-	99	46.146	ENSAPLG00000012618	SPEN	100	46.111	Anas_platyrhynchos
ENSTRUG00000024350	-	89	47.799	ENSANAG00000034428	SPEN	86	47.327	Aotus_nancymaae
ENSTRUG00000024350	-	50	80.233	ENSACLG00000021433	si:ch1073-335m2.2	93	75.879	Astatotilapia_calliptera
ENSTRUG00000024350	-	100	74.621	ENSACLG00000016922	-	100	74.881	Astatotilapia_calliptera
ENSTRUG00000024350	-	100	53.719	ENSAMXG00000012485	spen	100	53.804	Astyanax_mexicanus
ENSTRUG00000024350	-	99	45.135	ENSBTAG00000018729	SPEN	97	44.320	Bos_taurus
ENSTRUG00000024350	-	88	51.005	ENSCJAG00000008527	SPEN	96	45.290	Callithrix_jacchus
ENSTRUG00000024350	-	86	51.876	ENSCAFG00000016132	-	92	50.891	Canis_familiaris
ENSTRUG00000024350	-	99	45.677	ENSCHIG00000025070	SPEN	98	44.776	Capra_hircus
ENSTRUG00000024350	-	79	45.135	ENSTSYG00000036016	SPEN	96	42.842	Carlito_syrichta
ENSTRUG00000024350	-	93	46.760	ENSCAPG00000013803	SPEN	99	76.821	Cavia_aperea
ENSTRUG00000024350	-	86	47.020	ENSCPOG00000014036	SPEN	95	76.667	Cavia_porcellus
ENSTRUG00000024350	-	90	42.816	ENSCCAG00000020258	SPEN	86	41.878	Cebus_capucinus
ENSTRUG00000024350	-	84	86.667	ENSCATG00000015079	SPEN	86	81.081	Cercocebus_atys
ENSTRUG00000024350	-	88	46.886	ENSCLAG00000002018	SPEN	94	76.667	Chinchilla_lanigera
ENSTRUG00000024350	-	90	47.985	ENSCSAG00000000841	SPEN	87	47.439	Chlorocebus_sabaeus
ENSTRUG00000024350	-	100	46.353	ENSCPBG00000010477	SPEN	100	45.860	Chrysemys_picta_bellii
ENSTRUG00000024350	-	90	45.969	ENSCANG00000034547	SPEN	96	42.937	Colobus_angolensis_palliatus
ENSTRUG00000024350	-	91	46.968	ENSCGRG00001007725	Spen	97	44.330	Cricetulus_griseus_chok1gshd
ENSTRUG00000024350	-	91	45.291	ENSCGRG00000010581	Spen	97	43.077	Cricetulus_griseus_crigri
ENSTRUG00000024350	-	98	72.901	ENSCSEG00000003915	-	100	72.591	Cynoglossus_semilaevis
ENSTRUG00000024350	-	100	69.781	ENSCVAG00000016346	-	100	69.845	Cyprinodon_variegatus
ENSTRUG00000024350	-	97	79.121	ENSCVAG00000009075	si:ch1073-335m2.2	99	79.121	Cyprinodon_variegatus
ENSTRUG00000024350	-	100	52.704	ENSDARG00000074245	spen	100	92.593	Danio_rerio
ENSTRUG00000024350	-	96	74.129	ENSDARG00000074332	si:ch1073-335m2.2	100	74.129	Danio_rerio
ENSTRUG00000024350	-	89	48.986	ENSDNOG00000041948	SPEN	87	47.664	Dasypus_novemcinctus
ENSTRUG00000024350	-	90	44.907	ENSDORG00000023909	Spen	96	42.641	Dipodomys_ordii
ENSTRUG00000024350	-	54	62.564	ENSETEG00000016692	-	55	58.216	Echinops_telfairi
ENSTRUG00000024350	-	94	86.765	ENSEASG00005015911	SPEN	96	81.757	Equus_asinus_asinus
ENSTRUG00000024350	-	94	86.765	ENSECAG00000008833	SPEN	96	81.757	Equus_caballus
ENSTRUG00000024350	-	57	86.047	ENSEEUG00000010255	SPEN	59	86.047	Erinaceus_europaeus
ENSTRUG00000024350	-	92	78.238	ENSELUG00000007726	si:ch1073-335m2.2	99	78.238	Esox_lucius
ENSTRUG00000024350	-	87	43.724	ENSFALG00000003551	SPEN	100	43.645	Ficedula_albicollis
ENSTRUG00000024350	-	88	46.628	ENSFDAG00000010212	SPEN	96	75.862	Fukomys_damarensis
ENSTRUG00000024350	-	54	65.574	ENSFHEG00000004544	si:ch1073-335m2.2	55	65.574	Fundulus_heteroclitus
ENSTRUG00000024350	-	97	91.848	ENSGMOG00000008397	-	98	93.855	Gadus_morhua
ENSTRUG00000024350	-	98	64.854	ENSGMOG00000008156	si:ch1073-335m2.2	98	80.226	Gadus_morhua
ENSTRUG00000024350	-	100	46.705	ENSGALG00000036932	SPEN	99	46.197	Gallus_gallus
ENSTRUG00000024350	-	100	70.658	ENSGAFG00000015819	-	88	93.820	Gambusia_affinis
ENSTRUG00000024350	-	98	73.529	ENSGAFG00000021570	si:ch1073-335m2.2	100	73.529	Gambusia_affinis
ENSTRUG00000024350	-	97	79.651	ENSGACG00000001176	si:ch1073-335m2.2	96	79.651	Gasterosteus_aculeatus
ENSTRUG00000024350	-	100	72.242	ENSGACG00000005341	-	100	72.158	Gasterosteus_aculeatus
ENSTRUG00000024350	-	100	47.466	ENSGAGG00000020785	SPEN	100	46.923	Gopherus_agassizii
ENSTRUG00000024350	-	90	48.490	ENSGGOG00000012041	SPEN	87	47.993	Gorilla_gorilla
ENSTRUG00000024350	-	50	80.233	ENSHBUG00000023253	si:ch1073-335m2.2	93	75.377	Haplochromis_burtoni
ENSTRUG00000024350	-	100	74.585	ENSHBUG00000020626	-	100	74.845	Haplochromis_burtoni
ENSTRUG00000024350	-	84	53.696	ENSHGLG00000019259	SPEN	81	80.337	Heterocephalus_glaber_female
ENSTRUG00000024350	-	67	55.401	ENSHGLG00100019294	SPEN	75	75.862	Heterocephalus_glaber_male
ENSTRUG00000024350	-	94	75.172	ENSHCOG00000006004	si:ch1073-335m2.2	99	75.172	Hippocampus_comes
ENSTRUG00000024350	-	100	51.949	ENSIPUG00000021668	spen	100	52.252	Ictalurus_punctatus
ENSTRUG00000024350	-	90	76.667	ENSIPUG00000018212	si:ch1073-335m2.2	98	76.667	Ictalurus_punctatus
ENSTRUG00000024350	-	89	46.144	ENSSTOG00000021428	SPEN	97	43.050	Ictidomys_tridecemlineatus
ENSTRUG00000024350	-	90	48.326	ENSJJAG00000010882	Spen	98	45.057	Jaculus_jaculus
ENSTRUG00000024350	-	93	78.022	ENSKMAG00000021725	si:ch1073-335m2.2	99	78.022	Kryptolebias_marmoratus
ENSTRUG00000024350	-	100	72.450	ENSKMAG00000003882	-	100	72.534	Kryptolebias_marmoratus
ENSTRUG00000024350	-	84	69.767	ENSLBEG00000019129	-	100	69.833	Labrus_bergylta
ENSTRUG00000024350	-	51	82.249	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	Labrus_bergylta
ENSTRUG00000024350	-	73	86.420	ENSLACG00000003258	SPEN	100	45.833	Latimeria_chalumnae
ENSTRUG00000024350	-	97	84.828	ENSLOCG00000007896	si:ch1073-335m2.2	98	84.828	Lepisosteus_oculatus
ENSTRUG00000024350	-	99	44.472	ENSLAFG00000004524	SPEN	97	43.011	Loxodonta_africana
ENSTRUG00000024350	-	90	48.263	ENSMFAG00000041974	SPEN	96	44.817	Macaca_fascicularis
ENSTRUG00000024350	-	90	48.298	ENSMMUG00000008026	SPEN	96	44.920	Macaca_mulatta
ENSTRUG00000024350	-	90	48.267	ENSMNEG00000042402	SPEN	96	44.828	Macaca_nemestrina
ENSTRUG00000024350	-	90	47.123	ENSMLEG00000039293	SPEN	96	43.912	Mandrillus_leucophaeus
ENSTRUG00000024350	-	98	73.762	ENSMAMG00000023870	si:ch1073-335m2.2	100	73.762	Mastacembelus_armatus
ENSTRUG00000024350	-	50	80.233	ENSMZEG00005011762	si:ch1073-335m2.2	93	75.879	Maylandia_zebra
ENSTRUG00000024350	-	89	72.283	ENSMZEG00005021491	-	99	72.481	Maylandia_zebra
ENSTRUG00000024350	-	83	51.062	ENSMAUG00000008318	Spen	94	50.834	Mesocricetus_auratus
ENSTRUG00000024350	-	99	45.333	ENSMICG00000030994	SPEN	96	44.875	Microcebus_murinus
ENSTRUG00000024350	-	88	48.344	ENSMOCG00000016083	Spen	86	47.961	Microtus_ochrogaster
ENSTRUG00000024350	-	91	74.737	ENSMMOG00000021742	si:ch1073-335m2.2	99	79.070	Mola_mola
ENSTRUG00000024350	-	100	45.234	ENSMODG00000003411	SPEN	100	44.557	Monodelphis_domestica
ENSTRUG00000024350	-	100	76.213	ENSMALG00000008625	-	100	76.185	Monopterus_albus
ENSTRUG00000024350	-	70	55.136	MGP_CAROLIEiJ_G0026745	Spen	87	46.548	Mus_caroli
ENSTRUG00000024350	-	74	53.950	ENSMUSG00000040761	Spen	98	43.139	Mus_musculus
ENSTRUG00000024350	-	70	54.277	MGP_PahariEiJ_G0029076	Spen	97	43.763	Mus_pahari
ENSTRUG00000024350	-	90	46.976	MGP_SPRETEiJ_G0027724	Spen	98	43.324	Mus_spretus
ENSTRUG00000024350	-	92	81.967	ENSMPUG00000016317	SPEN	96	43.176	Mustela_putorius_furo
ENSTRUG00000024350	-	94	88.172	ENSMLUG00000010144	SPEN	94	88.172	Myotis_lucifugus
ENSTRUG00000024350	-	95	47.738	ENSNGAG00000000641	Spen	98	47.163	Nannospalax_galili
ENSTRUG00000024350	-	51	80.814	ENSNBRG00000005733	si:ch1073-335m2.2	53	75.879	Neolamprologus_brichardi
ENSTRUG00000024350	-	85	70.998	ENSNBRG00000022090	-	100	71.372	Neolamprologus_brichardi
ENSTRUG00000024350	-	89	47.647	ENSNLEG00000007652	SPEN	86	47.275	Nomascus_leucogenys
ENSTRUG00000024350	-	89	84.375	ENSMEUG00000002422	SPEN	89	84.375	Notamacropus_eugenii
ENSTRUG00000024350	-	85	64.494	ENSOPRG00000015800	SPEN	81	64.043	Ochotona_princeps
ENSTRUG00000024350	-	94	46.049	ENSODEG00000016644	SPEN	94	80.337	Octodon_degus
ENSTRUG00000024350	-	100	73.021	ENSONIG00000006573	-	99	88.235	Oreochromis_niloticus
ENSTRUG00000024350	-	69	52.073	ENSOCUG00000010840	SPEN	97	42.581	Oryctolagus_cuniculus
ENSTRUG00000024350	-	87	60.838	ENSORLG00000028894	-	100	60.742	Oryzias_latipes
ENSTRUG00000024350	-	52	65.969	ENSORLG00000018414	si:ch1073-335m2.2	80	48.285	Oryzias_latipes
ENSTRUG00000024350	-	53	65.859	ENSORLG00020009351	si:ch1073-335m2.2	80	48.549	Oryzias_latipes_hni
ENSTRUG00000024350	-	87	61.343	ENSORLG00020007735	-	100	61.022	Oryzias_latipes_hni
ENSTRUG00000024350	-	94	65.308	ENSORLG00015005537	si:ch1073-335m2.2	74	74.611	Oryzias_latipes_hsok
ENSTRUG00000024350	-	100	63.922	ENSORLG00015022085	-	100	63.754	Oryzias_latipes_hsok
ENSTRUG00000024350	-	96	66.203	ENSOMEG00000004509	si:ch1073-335m2.2	76	59.410	Oryzias_melastigma
ENSTRUG00000024350	-	100	63.644	ENSOMEG00000007639	-	100	63.335	Oryzias_melastigma
ENSTRUG00000024350	-	70	55.640	ENSOGAG00000025110	SPEN	96	44.511	Otolemur_garnettii
ENSTRUG00000024350	-	89	47.891	ENSOARG00000008477	SPEN	96	44.034	Ovis_aries
ENSTRUG00000024350	-	89	47.727	ENSPPAG00000035690	SPEN	87	47.219	Pan_paniscus
ENSTRUG00000024350	-	90	48.286	ENSPTRG00000000210	SPEN	87	47.761	Pan_troglodytes
ENSTRUG00000024350	-	90	47.083	ENSPANG00000006293	SPEN	96	43.903	Papio_anubis
ENSTRUG00000024350	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSTRUG00000024350	-	100	52.242	ENSPKIG00000002617	SPEN	90	69.551	Paramormyrops_kingsleyae
ENSTRUG00000024350	-	99	45.631	ENSPSIG00000008026	SPEN	100	45.105	Pelodiscus_sinensis
ENSTRUG00000024350	-	90	45.896	ENSPEMG00000022997	Spen	97	43.201	Peromyscus_maniculatus_bairdii
ENSTRUG00000024350	-	98	73.892	ENSPFOG00000017986	si:ch1073-335m2.2	100	73.892	Poecilia_formosa
ENSTRUG00000024350	-	97	78.571	ENSPLAG00000016625	si:ch1073-335m2.2	100	73.892	Poecilia_latipinna
ENSTRUG00000024350	-	98	73.892	ENSPMEG00000002674	si:ch1073-335m2.2	100	73.892	Poecilia_mexicana
ENSTRUG00000024350	-	100	70.658	ENSPMEG00000006764	-	88	93.258	Poecilia_mexicana
ENSTRUG00000024350	-	97	78.571	ENSPREG00000005357	si:ch1073-335m2.2	99	78.571	Poecilia_reticulata
ENSTRUG00000024350	-	100	70.573	ENSPREG00000010399	-	88	93.258	Poecilia_reticulata
ENSTRUG00000024350	-	90	48.307	ENSPPYG00000001834	SPEN	87	47.823	Pongo_abelii
ENSTRUG00000024350	-	87	69.828	ENSPCAG00000009543	SPEN	86	69.828	Procavia_capensis
ENSTRUG00000024350	-	99	44.124	ENSPCOG00000021735	SPEN	96	43.695	Propithecus_coquereli
ENSTRUG00000024350	-	77	61.438	ENSPVAG00000013794	SPEN	75	59.806	Pteropus_vampyrus
ENSTRUG00000024350	-	100	74.642	ENSPNYG00000012379	-	100	74.902	Pundamilia_nyererei
ENSTRUG00000024350	-	50	80.233	ENSPNYG00000009042	si:ch1073-335m2.2	93	75.879	Pundamilia_nyererei
ENSTRUG00000024350	-	100	55.236	ENSPNAG00000020795	spen	87	71.154	Pygocentrus_nattereri
ENSTRUG00000024350	-	98	80.000	ENSPNAG00000011452	si:ch1073-335m2.2	100	80.000	Pygocentrus_nattereri
ENSTRUG00000024350	-	70	54.773	ENSRNOG00000033556	Spen	97	43.871	Rattus_norvegicus
ENSTRUG00000024350	-	90	47.227	ENSRBIG00000039654	SPEN	96	44.172	Rhinopithecus_bieti
ENSTRUG00000024350	-	89	47.366	ENSRROG00000035686	SPEN	96	44.113	Rhinopithecus_roxellana
ENSTRUG00000024350	-	88	48.089	ENSSBOG00000028770	SPEN	96	44.787	Saimiri_boliviensis_boliviensis
ENSTRUG00000024350	-	99	45.305	ENSSHAG00000004960	SPEN	99	70.537	Sarcophilus_harrisii
ENSTRUG00000024350	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	53.551	Scleropages_formosus
ENSTRUG00000024350	-	100	53.951	ENSSFOG00015010267	si:ch1073-335m2.2	100	53.869	Scleropages_formosus
ENSTRUG00000024350	-	100	76.053	ENSSMAG00000008996	-	100	75.856	Scophthalmus_maximus
ENSTRUG00000024350	-	71	73.399	ENSSMAG00000000125	si:ch1073-335m2.2	100	73.399	Scophthalmus_maximus
ENSTRUG00000024350	-	97	66.555	ENSSDUG00000008416	si:ch1073-335m2.2	100	67.532	Seriola_dumerili
ENSTRUG00000024350	-	100	78.616	ENSSDUG00000003476	-	99	80.473	Seriola_dumerili
ENSTRUG00000024350	-	97	66.555	ENSSLDG00000023347	si:ch1073-335m2.2	100	41.956	Seriola_lalandi_dorsalis
ENSTRUG00000024350	-	100	78.359	ENSSLDG00000012950	-	99	80.473	Seriola_lalandi_dorsalis
ENSTRUG00000024350	-	87	42.793	ENSSPUG00000001866	-	100	42.767	Sphenodon_punctatus
ENSTRUG00000024350	-	100	77.072	ENSSPAG00000006014	-	100	77.266	Stegastes_partitus
ENSTRUG00000024350	-	97	79.670	ENSSPAG00000012454	si:ch1073-335m2.2	99	79.670	Stegastes_partitus
ENSTRUG00000024350	-	86	45.314	ENSSSCG00000034484	SPEN	96	44.468	Sus_scrofa
ENSTRUG00000024350	-	96	66.369	ENSTNIG00000014666	si:ch1073-335m2.2	100	65.833	Tetraodon_nigroviridis
ENSTRUG00000024350	-	97	89.605	ENSTNIG00000010907	-	100	89.718	Tetraodon_nigroviridis
ENSTRUG00000024350	-	70	77.181	ENSTBEG00000003628	SPEN	71	77.181	Tupaia_belangeri
ENSTRUG00000024350	-	76	73.148	ENSTTRG00000015704	SPEN	72	73.148	Tursiops_truncatus
ENSTRUG00000024350	-	99	45.193	ENSUAMG00000009600	SPEN	96	44.667	Ursus_americanus
ENSTRUG00000024350	-	69	54.644	ENSUMAG00000021641	SPEN	96	43.861	Ursus_maritimus
ENSTRUG00000024350	-	88	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSTRUG00000024350	-	97	47.841	ENSXETG00000023114	SPEN	100	41.673	Xenopus_tropicalis
ENSTRUG00000024350	-	98	72.059	ENSXCOG00000004516	si:ch1073-335m2.2	100	72.059	Xiphophorus_couchianus
ENSTRUG00000024350	-	100	70.469	ENSXMAG00000021384	-	100	70.525	Xiphophorus_maculatus
ENSTRUG00000024350	-	97	78.571	ENSXMAG00000029887	si:ch1073-335m2.2	99	78.571	Xiphophorus_maculatus