EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000024403 (Gene tree)
Gene ID: 101076877
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3609 bases
Position: chr6:7075646-7079254
Accession: 101076877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000054431	Ribosomal_S18	PF01084.20	5.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052682	-	2987	XM_003965460	ENSTRUP00000054431	130 (aa)	XP_003965509	UPI0005D23D72

Gene Model

Click here to download ENSTRUG00000024403's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024403	mrps18c	100	66.923	ENSAPOG00000019045	mrps18c	100	66.923	Acanthochromis_polyacanthus
ENSTRUG00000024403	mrps18c	68	83.146	ENSACIG00000020253	mrps18c	88	83.146	Amphilophus_citrinellus
ENSTRUG00000024403	mrps18c	100	65.385	ENSAOCG00000014338	mrps18c	100	65.385	Amphiprion_ocellaris
ENSTRUG00000024403	mrps18c	67	81.609	ENSAPEG00000023068	-	96	69.811	Amphiprion_percula
ENSTRUG00000024403	mrps18c	100	65.385	ENSAPEG00000022956	mrps18c	100	65.385	Amphiprion_percula
ENSTRUG00000024403	mrps18c	98	73.228	ENSATEG00000023417	mrps18c	98	73.228	Anabas_testudineus
ENSTRUG00000024403	mrps18c	68	62.500	ENSAPLG00000012544	-	85	62.500	Anas_platyrhynchos
ENSTRUG00000024403	mrps18c	71	82.609	ENSACLG00000010521	mrps18c	90	82.609	Astatotilapia_calliptera
ENSTRUG00000024403	mrps18c	69	74.444	ENSAMXG00000012238	mrps18c	91	74.444	Astyanax_mexicanus
ENSTRUG00000024403	mrps18c	68	62.500	ENSCPBG00000007783	-	54	62.500	Chrysemys_picta_bellii
ENSTRUG00000024403	mrps18c	82	69.444	ENSCSEG00000000711	mrps18c	96	55.238	Cynoglossus_semilaevis
ENSTRUG00000024403	mrps18c	100	60.000	ENSCVAG00000020169	mrps18c	100	60.000	Cyprinodon_variegatus
ENSTRUG00000024403	mrps18c	82	65.094	ENSDARG00000069624	mrps18c	78	65.094	Danio_rerio
ENSTRUG00000024403	mrps18c	84	64.220	ENSELUG00000024603	mrps18c	82	64.220	Esox_lucius
ENSTRUG00000024403	mrps18c	100	61.538	ENSFHEG00000015550	mrps18c	95	61.538	Fundulus_heteroclitus
ENSTRUG00000024403	mrps18c	100	61.538	ENSFHEG00000018752	-	100	61.538	Fundulus_heteroclitus
ENSTRUG00000024403	mrps18c	74	58.333	ENSGALG00000023191	MRPS18C	67	58.333	Gallus_gallus
ENSTRUG00000024403	mrps18c	100	59.231	ENSGAFG00000008048	mrps18c	83	59.231	Gambusia_affinis
ENSTRUG00000024403	mrps18c	68	62.500	ENSGAGG00000015144	-	62	62.500	Gopherus_agassizii
ENSTRUG00000024403	mrps18c	100	71.538	ENSHBUG00000002008	mrps18c	100	71.538	Haplochromis_burtoni
ENSTRUG00000024403	mrps18c	96	61.600	ENSHCOG00000013161	mrps18c	91	61.600	Hippocampus_comes
ENSTRUG00000024403	mrps18c	70	71.429	ENSIPUG00000003783	mrps18c	88	71.429	Ictalurus_punctatus
ENSTRUG00000024403	mrps18c	100	67.692	ENSKMAG00000016467	mrps18c	100	67.692	Kryptolebias_marmoratus
ENSTRUG00000024403	mrps18c	99	76.744	ENSLBEG00000019174	mrps18c	99	76.744	Labrus_bergylta
ENSTRUG00000024403	mrps18c	99	76.744	ENSLBEG00000021861	mrps18c	99	76.744	Labrus_bergylta
ENSTRUG00000024403	mrps18c	98	49.606	ENSLACG00000011243	mrps18c	99	49.606	Latimeria_chalumnae
ENSTRUG00000024403	mrps18c	93	57.724	ENSLOCG00000012115	mrps18c	90	57.724	Lepisosteus_oculatus
ENSTRUG00000024403	mrps18c	100	64.925	ENSMAMG00000012386	mrps18c	100	64.925	Mastacembelus_armatus
ENSTRUG00000024403	mrps18c	100	71.538	ENSMZEG00005023278	mrps18c	100	71.538	Maylandia_zebra
ENSTRUG00000024403	mrps18c	71	84.783	ENSMMOG00000011316	mrps18c	70	84.783	Mola_mola
ENSTRUG00000024403	mrps18c	100	71.538	ENSNBRG00000006182	mrps18c	100	71.538	Neolamprologus_brichardi
ENSTRUG00000024403	mrps18c	68	68.182	ENSMEUG00000010972	-	69	68.182	Notamacropus_eugenii
ENSTRUG00000024403	mrps18c	100	67.692	ENSONIG00000012527	mrps18c	92	79.570	Oreochromis_niloticus
ENSTRUG00000024403	mrps18c	99	65.116	ENSORLG00015006869	mrps18c	99	65.116	Oryzias_latipes_hsok
ENSTRUG00000024403	mrps18c	68	76.136	ENSOMEG00000005009	mrps18c	85	76.136	Oryzias_melastigma
ENSTRUG00000024403	mrps18c	77	66.000	ENSPKIG00000021736	mrps18c	73	66.000	Paramormyrops_kingsleyae
ENSTRUG00000024403	mrps18c	70	84.615	ENSPMGG00000002991	mrps18c	92	84.615	Periophthalmus_magnuspinnatus
ENSTRUG00000024403	mrps18c	100	61.538	ENSPFOG00000002351	mrps18c	83	61.538	Poecilia_formosa
ENSTRUG00000024403	mrps18c	100	60.769	ENSPLAG00000015187	mrps18c	100	60.769	Poecilia_latipinna
ENSTRUG00000024403	mrps18c	100	60.769	ENSPMEG00000014488	mrps18c	83	60.769	Poecilia_mexicana
ENSTRUG00000024403	mrps18c	64	72.289	ENSPREG00000012593	mrps18c	85	72.289	Poecilia_reticulata
ENSTRUG00000024403	mrps18c	100	70.769	ENSPNYG00000010654	mrps18c	100	70.769	Pundamilia_nyererei
ENSTRUG00000024403	mrps18c	73	67.368	ENSPNAG00000009350	mrps18c	85	70.330	Pygocentrus_nattereri
ENSTRUG00000024403	mrps18c	93	61.157	ENSSFOG00015019444	mrps18c	87	61.157	Scleropages_formosus
ENSTRUG00000024403	mrps18c	100	72.308	ENSSDUG00000015676	mrps18c	100	72.308	Seriola_dumerili
ENSTRUG00000024403	mrps18c	71	80.435	ENSSLDG00000002034	mrps18c	71	80.435	Seriola_lalandi_dorsalis
ENSTRUG00000024403	mrps18c	74	59.375	ENSSPUG00000013990	-	69	59.375	Sphenodon_punctatus
ENSTRUG00000024403	mrps18c	99	62.016	ENSSPAG00000008687	mrps18c	99	62.016	Stegastes_partitus
ENSTRUG00000024403	mrps18c	100	89.231	ENSTNIG00000005674	mrps18c	100	89.231	Tetraodon_nigroviridis
ENSTRUG00000024403	mrps18c	65	71.429	ENSXETG00000027597	mrps18c	64	71.429	Xenopus_tropicalis
ENSTRUG00000024403	mrps18c	100	56.923	ENSXCOG00000016208	mrps18c	89	70.787	Xiphophorus_couchianus
ENSTRUG00000024403	mrps18c	100	60.000	ENSXMAG00000012555	mrps18c	83	60.000	Xiphophorus_maculatus