EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000024420 (Gene tree)
Gene ID: 101067807
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 10952 bases
Position: chr21:1966972-1977923
Accession: 101067807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000048232	PC4	PF02229.16	5.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053278	-	2584	XM_011615253	ENSTRUP00000048232	125 (aa)	XP_011613555	UPI00003601AC

Gene Model

Click here to download ENSTRUG00000024420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024420	sub1b	100	66.929	ENSG00000113387	SUB1	100	70.866	Homo_sapiens
ENSTRUG00000024420	sub1b	100	88.000	ENSAPOG00000005917	SUB1	100	88.000	Acanthochromis_polyacanthus
ENSTRUG00000024420	sub1b	100	66.929	ENSAMEG00000006238	SUB1	95	70.866	Ailuropoda_melanoleuca
ENSTRUG00000024420	sub1b	100	91.200	ENSACIG00000015976	sub1b	100	91.200	Amphilophus_citrinellus
ENSTRUG00000024420	sub1b	96	81.667	ENSAOCG00000007313	-	83	91.176	Amphiprion_ocellaris
ENSTRUG00000024420	sub1b	81	80.198	ENSAOCG00000002323	-	77	81.720	Amphiprion_ocellaris
ENSTRUG00000024420	sub1b	80	82.000	ENSAPEG00000017151	-	72	82.796	Amphiprion_percula
ENSTRUG00000024420	sub1b	58	76.389	ENSAPEG00000014618	-	62	81.538	Amphiprion_percula
ENSTRUG00000024420	sub1b	100	91.200	ENSAPEG00000024347	sub1b	100	91.200	Amphiprion_percula
ENSTRUG00000024420	sub1b	100	89.600	ENSATEG00000010340	sub1b	100	89.600	Anabas_testudineus
ENSTRUG00000024420	sub1b	100	66.165	ENSACAG00000007974	SUB1	100	64.662	Anolis_carolinensis
ENSTRUG00000024420	sub1b	100	66.929	ENSANAG00000011651	-	100	70.866	Aotus_nancymaae
ENSTRUG00000024420	sub1b	100	67.460	ENSANAG00000023392	-	83	71.429	Aotus_nancymaae
ENSTRUG00000024420	sub1b	100	91.200	ENSACLG00000016875	sub1b	64	91.200	Astatotilapia_calliptera
ENSTRUG00000024420	sub1b	100	78.571	ENSAMXG00000037104	sub1b	100	75.397	Astyanax_mexicanus
ENSTRUG00000024420	sub1b	100	66.929	ENSBTAG00000021965	SUB1	100	70.866	Bos_taurus
ENSTRUG00000024420	sub1b	76	39.583	WBGene00011743	T13F2.2	50	50.000	Caenorhabditis_elegans
ENSTRUG00000024420	sub1b	80	64.706	ENSCJAG00000018718	SUB1	98	62.745	Callithrix_jacchus
ENSTRUG00000024420	sub1b	100	66.929	ENSCAFG00000016713	-	96	65.354	Canis_familiaris
ENSTRUG00000024420	sub1b	100	66.929	ENSCAFG00000018879	-	88	65.354	Canis_familiaris
ENSTRUG00000024420	sub1b	100	65.600	ENSCAFG00000024488	-	82	67.961	Canis_familiaris
ENSTRUG00000024420	sub1b	100	65.625	ENSCAFG00020011479	-	77	70.312	Canis_lupus_dingo
ENSTRUG00000024420	sub1b	100	66.929	ENSCAFG00020016840	-	100	70.866	Canis_lupus_dingo
ENSTRUG00000024420	sub1b	100	66.929	ENSCHIG00000008460	SUB1	100	70.866	Capra_hircus
ENSTRUG00000024420	sub1b	100	66.929	ENSTSYG00000029948	-	100	70.866	Carlito_syrichta
ENSTRUG00000024420	sub1b	100	59.843	ENSTSYG00000035366	-	83	58.268	Carlito_syrichta
ENSTRUG00000024420	sub1b	100	62.308	ENSTSYG00000014069	-	93	60.769	Carlito_syrichta
ENSTRUG00000024420	sub1b	100	66.929	ENSCPOG00000031334	SUB1	100	70.866	Cavia_porcellus
ENSTRUG00000024420	sub1b	100	64.567	ENSCCAG00000020604	-	100	62.992	Cebus_capucinus
ENSTRUG00000024420	sub1b	100	64.567	ENSCCAG00000033751	-	95	62.992	Cebus_capucinus
ENSTRUG00000024420	sub1b	100	60.317	ENSCCAG00000017043	-	93	64.286	Cebus_capucinus
ENSTRUG00000024420	sub1b	100	66.929	ENSCCAG00000023605	-	100	70.866	Cebus_capucinus
ENSTRUG00000024420	sub1b	100	66.929	ENSCATG00000031199	SUB1	100	70.866	Cercocebus_atys
ENSTRUG00000024420	sub1b	100	65.625	ENSCLAG00000007522	SUB1	100	69.531	Chinchilla_lanigera
ENSTRUG00000024420	sub1b	100	66.929	ENSCSAG00000019449	-	100	69.291	Chlorocebus_sabaeus
ENSTRUG00000024420	sub1b	100	66.929	ENSCSAG00000017172	-	100	70.866	Chlorocebus_sabaeus
ENSTRUG00000024420	sub1b	100	72.222	ENSCPBG00000024218	SUB1	79	70.635	Chrysemys_picta_bellii
ENSTRUG00000024420	sub1b	100	57.143	ENSCANG00000028665	-	90	54.762	Colobus_angolensis_palliatus
ENSTRUG00000024420	sub1b	100	66.929	ENSCANG00000029372	SUB1	100	70.866	Colobus_angolensis_palliatus
ENSTRUG00000024420	sub1b	100	64.567	ENSCGRG00001003473	-	100	68.504	Cricetulus_griseus_chok1gshd
ENSTRUG00000024420	sub1b	100	56.349	ENSCGRG00001014660	-	100	55.556	Cricetulus_griseus_chok1gshd
ENSTRUG00000024420	sub1b	64	62.069	ENSCGRG00001016254	-	57	73.529	Cricetulus_griseus_chok1gshd
ENSTRUG00000024420	sub1b	100	64.567	ENSCGRG00000001133	-	100	68.504	Cricetulus_griseus_crigri
ENSTRUG00000024420	sub1b	100	51.128	ENSCGRG00000001489	-	58	73.529	Cricetulus_griseus_crigri
ENSTRUG00000024420	sub1b	100	56.349	ENSCGRG00000019368	-	100	55.556	Cricetulus_griseus_crigri
ENSTRUG00000024420	sub1b	99	79.032	ENSDARG00000007720	sub1b	99	79.032	Danio_rerio
ENSTRUG00000024420	sub1b	99	75.806	ENSDARG00000053446	sub1a	100	79.200	Danio_rerio
ENSTRUG00000024420	sub1b	100	65.354	ENSDNOG00000040794	-	100	69.291	Dasypus_novemcinctus
ENSTRUG00000024420	sub1b	100	63.780	ENSDNOG00000032396	-	100	62.992	Dasypus_novemcinctus
ENSTRUG00000024420	sub1b	100	66.929	ENSDORG00000013916	Sub1	100	70.866	Dipodomys_ordii
ENSTRUG00000024420	sub1b	100	66.929	ENSEASG00005007099	SUB1	100	70.866	Equus_asinus_asinus
ENSTRUG00000024420	sub1b	100	66.929	ENSECAG00000012399	SUB1	100	70.866	Equus_caballus
ENSTRUG00000024420	sub1b	81	72.549	ENSEEUG00000000436	SUB1	99	72.549	Erinaceus_europaeus
ENSTRUG00000024420	sub1b	100	66.929	ENSFCAG00000037288	SUB1	100	70.866	Felis_catus
ENSTRUG00000024420	sub1b	100	73.016	ENSFALG00000002143	SUB1	87	71.429	Ficedula_albicollis
ENSTRUG00000024420	sub1b	100	66.929	ENSFDAG00000017179	SUB1	100	70.866	Fukomys_damarensis
ENSTRUG00000024420	sub1b	100	43.651	ENSGALG00000027147	-	100	43.651	Gallus_gallus
ENSTRUG00000024420	sub1b	100	73.016	ENSGALG00000003248	SUB1	100	71.429	Gallus_gallus
ENSTRUG00000024420	sub1b	100	71.429	ENSGALG00000034905	-	100	71.429	Gallus_gallus
ENSTRUG00000024420	sub1b	100	88.800	ENSGACG00000003912	sub1b	100	88.800	Gasterosteus_aculeatus
ENSTRUG00000024420	sub1b	100	73.016	ENSGAGG00000013535	SUB1	100	71.429	Gopherus_agassizii
ENSTRUG00000024420	sub1b	100	66.929	ENSGGOG00000040900	SUB1	100	70.866	Gorilla_gorilla
ENSTRUG00000024420	sub1b	99	79.032	ENSHBUG00000013953	sub1b	77	91.262	Haplochromis_burtoni
ENSTRUG00000024420	sub1b	100	66.929	ENSHGLG00000006749	SUB1	100	70.866	Heterocephalus_glaber_female
ENSTRUG00000024420	sub1b	100	66.929	ENSHGLG00100014344	SUB1	100	70.866	Heterocephalus_glaber_male
ENSTRUG00000024420	sub1b	100	84.800	ENSHCOG00000001809	sub1b	100	84.800	Hippocampus_comes
ENSTRUG00000024420	sub1b	100	77.344	ENSIPUG00000024367	SUB1	100	76.562	Ictalurus_punctatus
ENSTRUG00000024420	sub1b	100	80.800	ENSIPUG00000008166	sub1	100	80.800	Ictalurus_punctatus
ENSTRUG00000024420	sub1b	100	66.142	ENSSTOG00000019364	SUB1	100	70.079	Ictidomys_tridecemlineatus
ENSTRUG00000024420	sub1b	100	65.354	ENSJJAG00000018885	Sub1	100	65.354	Jaculus_jaculus
ENSTRUG00000024420	sub1b	99	87.903	ENSLBEG00000010728	sub1b	100	87.200	Labrus_bergylta
ENSTRUG00000024420	sub1b	52	84.615	ENSLACG00000001068	SUB1	100	84.615	Latimeria_chalumnae
ENSTRUG00000024420	sub1b	100	76.000	ENSLOCG00000006692	sub1b	100	76.000	Lepisosteus_oculatus
ENSTRUG00000024420	sub1b	100	68.504	ENSLAFG00000032088	-	100	71.654	Loxodonta_africana
ENSTRUG00000024420	sub1b	100	68.504	ENSLAFG00000011006	-	100	71.654	Loxodonta_africana
ENSTRUG00000024420	sub1b	100	66.929	ENSMFAG00000040728	SUB1	100	70.866	Macaca_fascicularis
ENSTRUG00000024420	sub1b	100	59.055	ENSMFAG00000045643	-	61	57.480	Macaca_fascicularis
ENSTRUG00000024420	sub1b	100	66.929	ENSMMUG00000046181	SUB1	100	70.866	Macaca_mulatta
ENSTRUG00000024420	sub1b	100	66.929	ENSMNEG00000037046	SUB1	100	70.866	Macaca_nemestrina
ENSTRUG00000024420	sub1b	100	66.929	ENSMLEG00000037017	-	100	70.866	Mandrillus_leucophaeus
ENSTRUG00000024420	sub1b	100	54.762	ENSMLEG00000043436	-	90	53.968	Mandrillus_leucophaeus
ENSTRUG00000024420	sub1b	100	65.354	ENSMLEG00000030509	-	94	68.504	Mandrillus_leucophaeus
ENSTRUG00000024420	sub1b	100	90.400	ENSMAMG00000018428	sub1b	100	90.400	Mastacembelus_armatus
ENSTRUG00000024420	sub1b	100	91.200	ENSMZEG00005021252	sub1b	100	91.200	Maylandia_zebra
ENSTRUG00000024420	sub1b	100	45.669	ENSMGAG00000001200	-	51	63.235	Meleagris_gallopavo
ENSTRUG00000024420	sub1b	100	73.016	ENSMGAG00000002906	SUB1	100	71.429	Meleagris_gallopavo
ENSTRUG00000024420	sub1b	100	64.567	ENSMAUG00000020232	Sub1	100	68.504	Mesocricetus_auratus
ENSTRUG00000024420	sub1b	100	66.929	ENSMICG00000014535	SUB1	100	70.866	Microcebus_murinus
ENSTRUG00000024420	sub1b	100	65.354	ENSMOCG00000018930	-	100	69.291	Microtus_ochrogaster
ENSTRUG00000024420	sub1b	100	58.730	ENSMOCG00000016424	-	100	57.937	Microtus_ochrogaster
ENSTRUG00000024420	sub1b	83	75.962	ENSMODG00000020410	SUB1	75	75.962	Monodelphis_domestica
ENSTRUG00000024420	sub1b	100	88.800	ENSMALG00000007163	sub1b	81	88.800	Monopterus_albus
ENSTRUG00000024420	sub1b	100	64.567	MGP_CAROLIEiJ_G0019676	Sub1	100	68.504	Mus_caroli
ENSTRUG00000024420	sub1b	100	64.567	ENSMUSG00000022205	Sub1	100	68.504	Mus_musculus
ENSTRUG00000024420	sub1b	100	63.780	MGP_PahariEiJ_G0016056	Sub1	100	67.717	Mus_pahari
ENSTRUG00000024420	sub1b	100	64.567	MGP_SPRETEiJ_G0020573	Sub1	100	68.504	Mus_spretus
ENSTRUG00000024420	sub1b	100	66.142	ENSMPUG00000018418	-	100	70.079	Mustela_putorius_furo
ENSTRUG00000024420	sub1b	100	66.929	ENSMPUG00000015185	-	100	70.866	Mustela_putorius_furo
ENSTRUG00000024420	sub1b	100	68.504	ENSMLUG00000013685	-	95	72.441	Myotis_lucifugus
ENSTRUG00000024420	sub1b	100	64.567	ENSMLUG00000009236	-	95	64.567	Myotis_lucifugus
ENSTRUG00000024420	sub1b	100	64.567	ENSNGAG00000014072	-	100	68.504	Nannospalax_galili
ENSTRUG00000024420	sub1b	100	59.200	ENSNGAG00000017212	-	100	59.200	Nannospalax_galili
ENSTRUG00000024420	sub1b	100	63.492	ENSNGAG00000010782	-	84	66.667	Nannospalax_galili
ENSTRUG00000024420	sub1b	83	91.346	ENSNBRG00000008451	sub1b	84	92.233	Neolamprologus_brichardi
ENSTRUG00000024420	sub1b	100	64.286	ENSNLEG00000035968	-	100	62.698	Nomascus_leucogenys
ENSTRUG00000024420	sub1b	100	66.142	ENSNLEG00000036068	SUB1	100	70.079	Nomascus_leucogenys
ENSTRUG00000024420	sub1b	100	67.717	ENSNLEG00000018383	-	95	72.441	Nomascus_leucogenys
ENSTRUG00000024420	sub1b	100	70.635	ENSMEUG00000007770	SUB1	100	70.635	Notamacropus_eugenii
ENSTRUG00000024420	sub1b	100	66.142	ENSOPRG00000012887	SUB1	100	70.866	Ochotona_princeps
ENSTRUG00000024420	sub1b	100	66.929	ENSODEG00000001937	-	100	70.866	Octodon_degus
ENSTRUG00000024420	sub1b	100	64.567	ENSODEG00000014558	-	69	70.192	Octodon_degus
ENSTRUG00000024420	sub1b	86	67.593	ENSODEG00000015114	-	84	69.231	Octodon_degus
ENSTRUG00000024420	sub1b	100	72.222	ENSOANG00000002328	SUB1	95	68.000	Ornithorhynchus_anatinus
ENSTRUG00000024420	sub1b	100	66.929	ENSOCUG00000006262	SUB1	60	66.142	Oryctolagus_cuniculus
ENSTRUG00000024420	sub1b	98	66.935	ENSOGAG00000000337	-	100	70.968	Otolemur_garnettii
ENSTRUG00000024420	sub1b	100	66.929	ENSOGAG00000009012	-	100	70.866	Otolemur_garnettii
ENSTRUG00000024420	sub1b	100	66.929	ENSOARG00000012154	SUB1	100	70.866	Ovis_aries
ENSTRUG00000024420	sub1b	100	66.929	ENSPPAG00000011212	SUB1	100	70.866	Pan_paniscus
ENSTRUG00000024420	sub1b	100	66.929	ENSPPRG00000008557	SUB1	100	70.866	Panthera_pardus
ENSTRUG00000024420	sub1b	100	66.929	ENSPTIG00000009466	SUB1	100	70.866	Panthera_tigris_altaica
ENSTRUG00000024420	sub1b	100	60.630	ENSPTRG00000041644	-	100	61.417	Pan_troglodytes
ENSTRUG00000024420	sub1b	100	66.929	ENSPTRG00000048895	SUB1	100	70.866	Pan_troglodytes
ENSTRUG00000024420	sub1b	100	65.079	ENSPANG00000035601	-	100	64.286	Papio_anubis
ENSTRUG00000024420	sub1b	100	57.937	ENSPANG00000033272	-	90	56.349	Papio_anubis
ENSTRUG00000024420	sub1b	100	65.354	ENSPANG00000000672	-	91	68.504	Papio_anubis
ENSTRUG00000024420	sub1b	100	66.929	ENSPANG00000000339	-	97	70.866	Papio_anubis
ENSTRUG00000024420	sub1b	100	66.929	ENSPANG00000002644	-	95	70.866	Papio_anubis
ENSTRUG00000024420	sub1b	100	77.600	ENSPKIG00000016923	sub1b	100	77.600	Paramormyrops_kingsleyae
ENSTRUG00000024420	sub1b	100	71.429	ENSPSIG00000005731	SUB1	95	69.841	Pelodiscus_sinensis
ENSTRUG00000024420	sub1b	100	69.048	ENSPCIG00000020827	-	100	69.048	Phascolarctos_cinereus
ENSTRUG00000024420	sub1b	100	70.635	ENSPCIG00000020907	-	100	70.635	Phascolarctos_cinereus
ENSTRUG00000024420	sub1b	100	66.929	ENSPPYG00000015379	SUB1	100	70.866	Pongo_abelii
ENSTRUG00000024420	sub1b	100	62.992	ENSPPYG00000018347	-	100	63.780	Pongo_abelii
ENSTRUG00000024420	sub1b	100	66.929	ENSPCOG00000014391	SUB1	100	70.866	Propithecus_coquereli
ENSTRUG00000024420	sub1b	100	66.929	ENSPVAG00000004785	SUB1	100	70.866	Pteropus_vampyrus
ENSTRUG00000024420	sub1b	100	91.200	ENSPNYG00000010975	sub1b	100	91.200	Pundamilia_nyererei
ENSTRUG00000024420	sub1b	99	79.839	ENSPNAG00000005998	sub1b	99	79.839	Pygocentrus_nattereri
ENSTRUG00000024420	sub1b	100	73.016	ENSPNAG00000008693	sub1a	100	79.365	Pygocentrus_nattereri
ENSTRUG00000024420	sub1b	100	65.354	ENSRNOG00000050563	Sub1	100	69.291	Rattus_norvegicus
ENSTRUG00000024420	sub1b	100	65.354	ENSRBIG00000031233	SUB1	100	65.079	Rhinopithecus_bieti
ENSTRUG00000024420	sub1b	100	62.698	ENSRROG00000042718	-	90	61.111	Rhinopithecus_roxellana
ENSTRUG00000024420	sub1b	100	66.929	ENSRROG00000040438	SUB1	100	70.866	Rhinopithecus_roxellana
ENSTRUG00000024420	sub1b	100	66.929	ENSSBOG00000026994	SUB1	100	70.866	Saimiri_boliviensis_boliviensis
ENSTRUG00000024420	sub1b	100	70.635	ENSSHAG00000014986	SUB1	100	70.635	Sarcophilus_harrisii
ENSTRUG00000024420	sub1b	100	72.441	ENSSFOG00015018386	sub1b	100	72.441	Scleropages_formosus
ENSTRUG00000024420	sub1b	100	76.800	ENSSFOG00015017283	sub1b	100	76.800	Scleropages_formosus
ENSTRUG00000024420	sub1b	100	89.600	ENSSMAG00000000313	sub1b	100	89.600	Scophthalmus_maximus
ENSTRUG00000024420	sub1b	100	90.400	ENSSDUG00000013854	sub1b	76	90.400	Seriola_dumerili
ENSTRUG00000024420	sub1b	100	90.400	ENSSLDG00000000852	sub1b	100	90.400	Seriola_lalandi_dorsalis
ENSTRUG00000024420	sub1b	100	71.429	ENSSPUG00000016817	SUB1	100	69.841	Sphenodon_punctatus
ENSTRUG00000024420	sub1b	100	90.400	ENSSPAG00000019363	sub1b	100	90.400	Stegastes_partitus
ENSTRUG00000024420	sub1b	100	66.929	ENSSSCG00000032650	-	100	70.866	Sus_scrofa
ENSTRUG00000024420	sub1b	100	66.929	ENSSSCG00000040294	-	87	65.354	Sus_scrofa
ENSTRUG00000024420	sub1b	100	73.016	ENSTGUG00000001918	SUB1	100	71.429	Taeniopygia_guttata
ENSTRUG00000024420	sub1b	100	97.600	ENSTNIG00000002700	sub1b	100	97.600	Tetraodon_nigroviridis
ENSTRUG00000024420	sub1b	99	61.905	ENSTBEG00000015821	-	100	61.905	Tupaia_belangeri
ENSTRUG00000024420	sub1b	100	66.142	ENSTBEG00000001790	-	100	65.354	Tupaia_belangeri
ENSTRUG00000024420	sub1b	100	68.504	ENSTBEG00000012861	-	100	66.142	Tupaia_belangeri
ENSTRUG00000024420	sub1b	100	66.142	ENSTBEG00000004053	-	100	70.079	Tupaia_belangeri
ENSTRUG00000024420	sub1b	100	66.142	ENSTBEG00000006504	-	100	70.079	Tupaia_belangeri
ENSTRUG00000024420	sub1b	100	67.717	ENSTBEG00000011247	-	81	67.308	Tupaia_belangeri
ENSTRUG00000024420	sub1b	81	71.569	ENSTTRG00000017324	SUB1	99	71.569	Tursiops_truncatus
ENSTRUG00000024420	sub1b	100	66.929	ENSUAMG00000000182	SUB1	100	70.866	Ursus_americanus
ENSTRUG00000024420	sub1b	100	66.929	ENSUMAG00000013792	SUB1	100	70.866	Ursus_maritimus
ENSTRUG00000024420	sub1b	100	63.492	ENSVPAG00000011012	SUB1	100	61.905	Vicugna_pacos
ENSTRUG00000024420	sub1b	86	62.727	ENSVVUG00000025193	-	95	59.292	Vulpes_vulpes
ENSTRUG00000024420	sub1b	100	66.929	ENSVVUG00000022166	-	100	70.866	Vulpes_vulpes
ENSTRUG00000024420	sub1b	100	68.750	ENSXETG00000027218	sub1	100	67.188	Xenopus_tropicalis