EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024455 (Gene tree)
Gene ID: 101065932
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6601 bases
Position: chr22:1722683-1729283
Accession: 101065932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000049729	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051908	-	3665	XM_003975350	ENSTRUP00000049729	242 (aa)	XP_003975399	H2TBT8

Gene Model

Click here to download ENSTRUG00000024455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024455	rab12	69	43.529	ENSTRUG00000025018	rab39bb	79	43.529
ENSTRUG00000024455	rab12	67	46.296	ENSTRUG00000020633	rab35b	99	39.130
ENSTRUG00000024455	rab12	69	31.667	ENSTRUG00000008651	rasl11a	68	31.667
ENSTRUG00000024455	rab12	70	49.704	ENSTRUG00000023164	rab1ab	83	49.704
ENSTRUG00000024455	rab12	66	41.509	ENSTRUG00000023252	rab6a	76	41.509
ENSTRUG00000024455	rab12	65	36.250	ENSTRUG00000014481	rab34b	64	36.250
ENSTRUG00000024455	rab12	62	30.464	ENSTRUG00000024825	hrasb	85	30.488
ENSTRUG00000024455	rab12	71	35.955	ENSTRUG00000020093	-	86	35.955
ENSTRUG00000024455	rab12	67	49.390	ENSTRUG00000004984	rab18a	79	49.390
ENSTRUG00000024455	rab12	70	32.353	ENSTRUG00000020012	rhebl1	90	32.353
ENSTRUG00000024455	rab12	69	32.335	ENSTRUG00000004902	rheb	89	32.335
ENSTRUG00000024455	rab12	71	37.791	ENSTRUG00000015590	rab5c	76	37.791
ENSTRUG00000024455	rab12	70	49.704	ENSTRUG00000024994	RAB1A	83	49.704
ENSTRUG00000024455	rab12	65	34.783	ENSTRUG00000010393	-	62	34.783
ENSTRUG00000024455	rab12	67	46.951	ENSTRUG00000004283	rab18b	79	46.951
ENSTRUG00000024455	rab12	70	48.521	ENSTRUG00000004287	rab1ba	84	48.521
ENSTRUG00000024455	rab12	66	37.107	ENSTRUG00000018380	rab22a	81	37.107
ENSTRUG00000024455	rab12	68	35.119	ENSTRUG00000013963	RAB9A	83	35.119
ENSTRUG00000024455	rab12	70	41.860	ENSTRUG00000010224	rab42a	78	41.860
ENSTRUG00000024455	rab12	79	38.220	ENSTRUG00000004881	rab6bb	91	38.220
ENSTRUG00000024455	rab12	67	31.902	ENSTRUG00000012454	rabl2	71	31.902
ENSTRUG00000024455	rab12	85	35.849	ENSTRUG00000011399	-	97	35.849
ENSTRUG00000024455	rab12	84	38.208	ENSTRUG00000022029	rab11bb	95	38.208
ENSTRUG00000024455	rab12	74	40.104	ENSTRUG00000007036	rab33ba	78	40.104
ENSTRUG00000024455	rab12	67	35.928	ENSTRUG00000008698	rab9a	82	35.928
ENSTRUG00000024455	rab12	84	35.922	ENSTRUG00000007556	rab11al	88	42.963
ENSTRUG00000024455	rab12	61	33.108	ENSTRUG00000017384	rras2	85	32.948
ENSTRUG00000024455	rab12	67	35.714	ENSTRUG00000015697	rab23	74	36.601
ENSTRUG00000024455	rab12	66	34.940	ENSTRUG00000005937	rab34a	73	34.940
ENSTRUG00000024455	rab12	69	49.398	ENSTRUG00000022559	rab30	81	49.398
ENSTRUG00000024455	rab12	84	38.278	ENSTRUG00000020792	rab11a	95	38.278
ENSTRUG00000024455	rab12	84	38.647	ENSTRUG00000007504	rab25b	95	39.512
ENSTRUG00000024455	rab12	64	31.210	ENSTRUG00000005805	mras	80	31.548
ENSTRUG00000024455	rab12	71	50.581	ENSTRUG00000024177	rab13	86	50.581
ENSTRUG00000024455	rab12	75	39.037	ENSTRUG00000020335	rab33a	71	38.974
ENSTRUG00000024455	rab12	84	35.122	ENSTRUG00000014595	-	95	35.122
ENSTRUG00000024455	rab12	67	42.331	ENSTRUG00000025076	si:dkey-16l2.16	87	46.364
ENSTRUG00000024455	rab12	62	32.450	ENSTRUG00000023449	kras	85	32.716
ENSTRUG00000024455	rab12	71	45.614	ENSTRUG00000017824	rab15	80	45.614
ENSTRUG00000024455	rab12	84	36.842	ENSTRUG00000021619	-	96	36.364
ENSTRUG00000024455	rab12	82	40.196	ENSTRUG00000009903	zgc:101559	85	40.196
ENSTRUG00000024455	rab12	68	41.818	ENSTRUG00000021614	-	75	41.818
ENSTRUG00000024455	rab12	66	40.252	ENSTRUG00000009223	rab41	75	40.252
ENSTRUG00000024455	rab12	79	40.104	ENSTRUG00000003363	rab2a	89	40.104
ENSTRUG00000024455	rab12	78	39.153	ENSTRUG00000014783	RAB15	86	39.153
ENSTRUG00000024455	rab12	83	35.323	ENSTRUG00000024368	rab5aa	90	35.323
ENSTRUG00000024455	rab12	71	35.955	ENSTRUG00000010082	RAB7A	86	35.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024455	rab12	84	87.805	ENSG00000206418	RAB12	97	84.810	Homo_sapiens
ENSTRUG00000024455	rab12	90	76.712	ENSAMEG00000007452	RAB12	100	77.586	Ailuropoda_melanoleuca
ENSTRUG00000024455	rab12	100	91.803	ENSACIG00000020616	rab12	100	93.443	Amphilophus_citrinellus
ENSTRUG00000024455	rab12	100	91.770	ENSAOCG00000002130	rab12	100	93.004	Amphiprion_ocellaris
ENSTRUG00000024455	rab12	100	91.770	ENSAPEG00000013255	rab12	100	93.004	Amphiprion_percula
ENSTRUG00000024455	rab12	100	93.388	ENSATEG00000019683	rab12	100	93.388	Anabas_testudineus
ENSTRUG00000024455	rab12	83	88.500	ENSACAG00000003360	RAB12	91	85.106	Anolis_carolinensis
ENSTRUG00000024455	rab12	100	92.593	ENSACLG00000007696	rab12	100	93.827	Astatotilapia_calliptera
ENSTRUG00000024455	rab12	100	86.179	ENSAMXG00000004882	rab12	100	87.398	Astyanax_mexicanus
ENSTRUG00000024455	rab12	84	88.293	ENSBTAG00000010356	RAB12	100	82.857	Bos_taurus
ENSTRUG00000024455	rab12	84	87.805	ENSCJAG00000015468	RAB12	72	82.449	Callithrix_jacchus
ENSTRUG00000024455	rab12	84	87.805	ENSCAFG00020023721	RAB12	81	84.810	Canis_lupus_dingo
ENSTRUG00000024455	rab12	84	88.293	ENSCHIG00000016103	RAB12	100	82.857	Capra_hircus
ENSTRUG00000024455	rab12	86	83.810	ENSCPOG00000022689	RAB12	100	88.095	Cavia_porcellus
ENSTRUG00000024455	rab12	84	87.805	ENSCCAG00000022862	RAB12	100	82.449	Cebus_capucinus
ENSTRUG00000024455	rab12	91	83.036	ENSCATG00000037784	RAB12	97	84.979	Cercocebus_atys
ENSTRUG00000024455	rab12	84	87.805	ENSCSAG00000017569	RAB12	68	84.255	Chlorocebus_sabaeus
ENSTRUG00000024455	rab12	90	84.932	ENSCPBG00000028375	RAB12	97	84.034	Chrysemys_picta_bellii
ENSTRUG00000024455	rab12	90	83.105	ENSCANG00000031453	RAB12	99	86.758	Colobus_angolensis_palliatus
ENSTRUG00000024455	rab12	93	83.186	ENSCGRG00001006958	Rab12	83	82.449	Cricetulus_griseus_chok1gshd
ENSTRUG00000024455	rab12	100	92.181	ENSCSEG00000016933	rab12	100	93.827	Cynoglossus_semilaevis
ENSTRUG00000024455	rab12	100	89.431	ENSCVAG00000003539	rab12	100	91.463	Cyprinodon_variegatus
ENSTRUG00000024455	rab12	97	89.744	ENSDARG00000089428	rab12	97	89.744	Danio_rerio
ENSTRUG00000024455	rab12	84	87.805	ENSDNOG00000046064	RAB12	54	84.810	Dasypus_novemcinctus
ENSTRUG00000024455	rab12	93	82.379	ENSDORG00000008920	Rab12	100	85.903	Dipodomys_ordii
ENSTRUG00000024455	rab12	83	63.500	ENSEBUG00000006581	rab12	96	63.500	Eptatretus_burgeri
ENSTRUG00000024455	rab12	84	87.805	ENSEASG00005002926	RAB12	83	82.449	Equus_asinus_asinus
ENSTRUG00000024455	rab12	84	87.805	ENSECAG00000007384	RAB12	71	82.449	Equus_caballus
ENSTRUG00000024455	rab12	100	89.669	ENSELUG00000007123	rab12	100	89.669	Esox_lucius
ENSTRUG00000024455	rab12	84	87.805	ENSFCAG00000027710	RAB12	70	84.810	Felis_catus
ENSTRUG00000024455	rab12	100	89.796	ENSFHEG00000004319	rab12	100	92.245	Fundulus_heteroclitus
ENSTRUG00000024455	rab12	86	88.942	ENSGMOG00000012335	rab12	87	89.423	Gadus_morhua
ENSTRUG00000024455	rab12	93	82.456	ENSGALG00000033608	RAB12	97	83.884	Gallus_gallus
ENSTRUG00000024455	rab12	90	89.401	ENSGACG00000016639	rab12	100	89.401	Gasterosteus_aculeatus
ENSTRUG00000024455	rab12	90	84.932	ENSGAGG00000007278	RAB12	97	84.034	Gopherus_agassizii
ENSTRUG00000024455	rab12	100	92.593	ENSHBUG00000008497	rab12	100	93.827	Haplochromis_burtoni
ENSTRUG00000024455	rab12	93	79.574	ENSHGLG00000006189	RAB12	93	82.773	Heterocephalus_glaber_female
ENSTRUG00000024455	rab12	100	88.889	ENSHCOG00000012376	rab12	100	88.889	Hippocampus_comes
ENSTRUG00000024455	rab12	93	89.732	ENSIPUG00000017401	rab12	100	85.656	Ictalurus_punctatus
ENSTRUG00000024455	rab12	93	81.416	ENSSTOG00000025122	RAB12	99	84.956	Ictidomys_tridecemlineatus
ENSTRUG00000024455	rab12	92	82.667	ENSJJAG00000019064	Rab12	99	86.222	Jaculus_jaculus
ENSTRUG00000024455	rab12	100	89.669	ENSKMAG00000020056	rab12	100	89.669	Kryptolebias_marmoratus
ENSTRUG00000024455	rab12	100	92.975	ENSLBEG00000013756	rab12	100	92.975	Labrus_bergylta
ENSTRUG00000024455	rab12	91	85.650	ENSLACG00000010461	RAB12	100	80.321	Latimeria_chalumnae
ENSTRUG00000024455	rab12	85	90.291	ENSLOCG00000002680	rab12	100	84.274	Lepisosteus_oculatus
ENSTRUG00000024455	rab12	84	87.805	ENSMFAG00000043551	RAB12	100	82.114	Macaca_fascicularis
ENSTRUG00000024455	rab12	84	87.805	ENSMNEG00000040853	RAB12	93	84.255	Macaca_nemestrina
ENSTRUG00000024455	rab12	100	94.215	ENSMAMG00000006862	rab12	100	94.215	Mastacembelus_armatus
ENSTRUG00000024455	rab12	100	92.593	ENSMZEG00005024316	rab12	100	93.827	Maylandia_zebra
ENSTRUG00000024455	rab12	83	83.333	ENSMGAG00000009197	RAB12	100	87.255	Meleagris_gallopavo
ENSTRUG00000024455	rab12	93	83.186	ENSMAUG00000008371	Rab12	83	82.449	Mesocricetus_auratus
ENSTRUG00000024455	rab12	91	83.036	ENSMICG00000030661	RAB12	99	84.388	Microcebus_murinus
ENSTRUG00000024455	rab12	90	83.105	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSTRUG00000024455	rab12	86	87.081	ENSMODG00000021452	RAB12	73	82.114	Monodelphis_domestica
ENSTRUG00000024455	rab12	100	92.562	ENSMALG00000015762	rab12	100	92.562	Monopterus_albus
ENSTRUG00000024455	rab12	93	83.186	MGP_CAROLIEiJ_G0021839	Rab12	84	82.449	Mus_caroli
ENSTRUG00000024455	rab12	93	83.186	ENSMUSG00000023460	Rab12	100	82.449	Mus_musculus
ENSTRUG00000024455	rab12	93	83.186	MGP_PahariEiJ_G0020826	Rab12	100	82.449	Mus_pahari
ENSTRUG00000024455	rab12	93	83.186	MGP_SPRETEiJ_G0022750	Rab12	83	82.449	Mus_spretus
ENSTRUG00000024455	rab12	91	83.036	ENSMLUG00000002883	RAB12	97	84.810	Myotis_lucifugus
ENSTRUG00000024455	rab12	91	76.339	ENSNGAG00000019722	-	97	74.684	Nannospalax_galili
ENSTRUG00000024455	rab12	95	80.258	ENSNGAG00000024103	-	99	83.691	Nannospalax_galili
ENSTRUG00000024455	rab12	100	92.593	ENSNBRG00000014428	rab12	100	93.827	Neolamprologus_brichardi
ENSTRUG00000024455	rab12	90	85.780	ENSNLEG00000006939	RAB12	97	84.810	Nomascus_leucogenys
ENSTRUG00000024455	rab12	97	80.753	ENSMEUG00000000493	RAB12	97	84.100	Notamacropus_eugenii
ENSTRUG00000024455	rab12	90	84.018	ENSODEG00000006414	RAB12	100	87.671	Octodon_degus
ENSTRUG00000024455	rab12	100	92.181	ENSONIG00000018469	rab12	100	93.416	Oreochromis_niloticus
ENSTRUG00000024455	rab12	100	93.388	ENSORLG00000003902	rab12	100	93.388	Oryzias_latipes
ENSTRUG00000024455	rab12	100	92.975	ENSORLG00020005131	rab12	100	92.975	Oryzias_latipes_hni
ENSTRUG00000024455	rab12	100	92.975	ENSORLG00015007869	rab12	100	92.975	Oryzias_latipes_hsok
ENSTRUG00000024455	rab12	100	93.388	ENSOMEG00000008191	rab12	100	93.388	Oryzias_melastigma
ENSTRUG00000024455	rab12	86	83.810	ENSOGAG00000028002	RAB12	99	87.619	Otolemur_garnettii
ENSTRUG00000024455	rab12	79	88.482	ENSOARG00000000728	RAB12	97	80.672	Ovis_aries
ENSTRUG00000024455	rab12	85	83.092	ENSPPAG00000009152	RAB12	97	87.379	Pan_paniscus
ENSTRUG00000024455	rab12	84	87.805	ENSPPRG00000024521	RAB12	97	84.810	Panthera_pardus
ENSTRUG00000024455	rab12	84	87.805	ENSPTRG00000009853	RAB12	97	84.810	Pan_troglodytes
ENSTRUG00000024455	rab12	84	88.293	ENSPANG00000009320	RAB12	95	84.681	Papio_anubis
ENSTRUG00000024455	rab12	100	86.008	ENSPKIG00000008579	rab12	100	86.420	Paramormyrops_kingsleyae
ENSTRUG00000024455	rab12	100	90.909	ENSPMGG00000001890	rab12	100	90.909	Periophthalmus_magnuspinnatus
ENSTRUG00000024455	rab12	93	83.628	ENSPEMG00000021032	Rab12	84	82.857	Peromyscus_maniculatus_bairdii
ENSTRUG00000024455	rab12	90	85.000	ENSPCIG00000010453	RAB12	60	84.100	Phascolarctos_cinereus
ENSTRUG00000024455	rab12	100	89.754	ENSPFOG00000001579	rab12	100	90.164	Poecilia_formosa
ENSTRUG00000024455	rab12	100	89.754	ENSPLAG00000013594	rab12	100	90.164	Poecilia_latipinna
ENSTRUG00000024455	rab12	100	89.754	ENSPMEG00000010417	rab12	100	90.164	Poecilia_mexicana
ENSTRUG00000024455	rab12	100	89.754	ENSPREG00000017487	rab12	100	90.574	Poecilia_reticulata
ENSTRUG00000024455	rab12	84	87.805	ENSPPYG00000009015	-	70	84.810	Pongo_abelii
ENSTRUG00000024455	rab12	84	87.805	ENSPCAG00000015007	RAB12	97	83.966	Procavia_capensis
ENSTRUG00000024455	rab12	84	88.293	ENSPCOG00000019816	RAB12	97	85.232	Propithecus_coquereli
ENSTRUG00000024455	rab12	84	87.317	ENSPVAG00000002757	RAB12	97	84.388	Pteropus_vampyrus
ENSTRUG00000024455	rab12	100	92.593	ENSPNYG00000023905	rab12	100	93.827	Pundamilia_nyererei
ENSTRUG00000024455	rab12	100	92.593	ENSPNYG00000005654	rab12	100	93.827	Pundamilia_nyererei
ENSTRUG00000024455	rab12	100	85.772	ENSPNAG00000015031	rab12	100	86.992	Pygocentrus_nattereri
ENSTRUG00000024455	rab12	93	81.938	ENSRNOG00000019295	Rab12	100	80.242	Rattus_norvegicus
ENSTRUG00000024455	rab12	91	83.036	ENSRBIG00000028760	RAB12	100	84.979	Rhinopithecus_bieti
ENSTRUG00000024455	rab12	92	82.667	ENSRROG00000019249	RAB12	94	86.222	Rhinopithecus_roxellana
ENSTRUG00000024455	rab12	93	79.295	ENSSBOG00000021125	RAB12	89	78.814	Saimiri_boliviensis_boliviensis
ENSTRUG00000024455	rab12	89	84.475	ENSSHAG00000001489	RAB12	97	84.475	Sarcophilus_harrisii
ENSTRUG00000024455	rab12	100	92.975	ENSSMAG00000012678	rab12	100	92.975	Scophthalmus_maximus
ENSTRUG00000024455	rab12	100	94.215	ENSSDUG00000008505	rab12	100	94.215	Seriola_dumerili
ENSTRUG00000024455	rab12	100	94.215	ENSSLDG00000022239	rab12	100	94.215	Seriola_lalandi_dorsalis
ENSTRUG00000024455	rab12	84	88.725	ENSSPUG00000003222	RAB12	96	86.076	Sphenodon_punctatus
ENSTRUG00000024455	rab12	100	92.181	ENSSPAG00000010822	rab12	100	93.416	Stegastes_partitus
ENSTRUG00000024455	rab12	84	88.780	ENSSSCG00000038026	RAB12	97	85.232	Sus_scrofa
ENSTRUG00000024455	rab12	86	87.560	ENSTGUG00000009889	RAB12	98	84.016	Taeniopygia_guttata
ENSTRUG00000024455	rab12	100	94.215	ENSTNIG00000014859	rab12	100	94.215	Tetraodon_nigroviridis
ENSTRUG00000024455	rab12	90	83.105	ENSTTRG00000008711	RAB12	99	86.758	Tursiops_truncatus
ENSTRUG00000024455	rab12	84	87.805	ENSUAMG00000018092	RAB12	97	84.810	Ursus_americanus
ENSTRUG00000024455	rab12	90	82.353	ENSVVUG00000011748	RAB12	99	85.973	Vulpes_vulpes
ENSTRUG00000024455	rab12	86	87.678	ENSXETG00000004289	rab12	74	86.957	Xenopus_tropicalis
ENSTRUG00000024455	rab12	100	89.754	ENSXCOG00000019310	rab12	100	90.574	Xiphophorus_couchianus
ENSTRUG00000024455	rab12	100	89.754	ENSXMAG00000023617	rab12	100	90.574	Xiphophorus_maculatus