EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000024586 (Gene tree)
Gene ID: 101068142
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 6348 bases
Position: chr7:2533822-2540169
Accession: 101068142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000011073	RRM_1	PF00076.22	9.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054493	-	4219	-	ENSTRUP00000049476	452 (aa)	-	-
ENSTRUT00000011133	-	3957	XM_011605154	ENSTRUP00000011073	514 (aa)	XP_011603456	H2SF92

Gene Model

Click here to download ENSTRUG00000024586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024586	-	76	79.310	ENSAPOG00000015109	rbm42	100	80.296	Acanthochromis_polyacanthus
ENSTRUG00000024586	-	76	77.805	ENSACIG00000010771	rbm42	100	77.805	Amphilophus_citrinellus
ENSTRUG00000024586	-	76	78.571	ENSAOCG00000008873	rbm42	100	80.049	Amphiprion_ocellaris
ENSTRUG00000024586	-	76	78.624	ENSAPEG00000012051	rbm42	99	80.098	Amphiprion_percula
ENSTRUG00000024586	-	76	76.847	ENSATEG00000000536	rbm42	100	78.079	Anabas_testudineus
ENSTRUG00000024586	-	76	77.778	ENSACLG00000004988	rbm42	100	79.064	Astatotilapia_calliptera
ENSTRUG00000024586	-	78	62.980	ENSAMXG00000016545	rbm42	100	67.612	Astyanax_mexicanus
ENSTRUG00000024586	-	74	76.322	ENSCSEG00000010248	rbm42	100	78.338	Cynoglossus_semilaevis
ENSTRUG00000024586	-	76	73.659	ENSCVAG00000015589	rbm42	100	74.146	Cyprinodon_variegatus
ENSTRUG00000024586	-	76	62.143	ENSDARG00000039910	rbm42	100	65.375	Danio_rerio
ENSTRUG00000024586	-	76	65.871	ENSELUG00000022403	rbm42	100	67.619	Esox_lucius
ENSTRUG00000024586	-	50	71.956	ENSFHEG00000006764	rbm42	91	71.218	Fundulus_heteroclitus
ENSTRUG00000024586	-	76	65.111	ENSGMOG00000012660	rbm42	100	66.339	Gadus_morhua
ENSTRUG00000024586	-	59	71.246	ENSGAFG00000009059	rbm42	100	72.843	Gambusia_affinis
ENSTRUG00000024586	-	76	75.931	ENSGACG00000004170	rbm42	100	76.923	Gasterosteus_aculeatus
ENSTRUG00000024586	-	76	77.778	ENSHBUG00000011141	rbm42	100	78.765	Haplochromis_burtoni
ENSTRUG00000024586	-	76	71.078	ENSHCOG00000021214	rbm42	100	71.324	Hippocampus_comes
ENSTRUG00000024586	-	76	63.014	ENSIPUG00000022365	rbm42	99	67.386	Ictalurus_punctatus
ENSTRUG00000024586	-	69	71.816	ENSKMAG00000015287	rbm42	99	71.816	Kryptolebias_marmoratus
ENSTRUG00000024586	-	76	78.272	ENSLBEG00000017547	rbm42	100	76.355	Labrus_bergylta
ENSTRUG00000024586	-	64	79.240	ENSLBEG00000004578	-	96	76.968	Labrus_bergylta
ENSTRUG00000024586	-	76	63.333	ENSLOCG00000003368	rbm42	100	65.000	Lepisosteus_oculatus
ENSTRUG00000024586	-	77	78.922	ENSMAMG00000006708	rbm42	100	80.296	Mastacembelus_armatus
ENSTRUG00000024586	-	76	77.778	ENSMZEG00005025234	rbm42	100	79.064	Maylandia_zebra
ENSTRUG00000024586	-	69	78.862	ENSMALG00000015720	rbm42	100	79.675	Monopterus_albus
ENSTRUG00000024586	-	76	78.431	ENSONIG00000008029	rbm42	100	79.412	Oreochromis_niloticus
ENSTRUG00000024586	-	76	59.662	ENSORLG00020022507	rbm42	100	60.291	Oryzias_latipes_hni
ENSTRUG00000024586	-	76	76.049	ENSORLG00015000659	rbm42	100	76.543	Oryzias_latipes_hsok
ENSTRUG00000024586	-	76	68.523	ENSPKIG00000015165	rbm42	100	68.675	Paramormyrops_kingsleyae
ENSTRUG00000024586	-	73	41.037	ENSPSIG00000013935	-	55	86.885	Pelodiscus_sinensis
ENSTRUG00000024586	-	66	75.568	ENSPMGG00000003569	rbm42	100	95.714	Periophthalmus_magnuspinnatus
ENSTRUG00000024586	-	76	71.707	ENSPFOG00000007701	rbm42	100	73.529	Poecilia_formosa
ENSTRUG00000024586	-	76	71.707	ENSPLAG00000009405	rbm42	100	73.594	Poecilia_latipinna
ENSTRUG00000024586	-	76	71.814	ENSPMEG00000010375	rbm42	100	73.775	Poecilia_mexicana
ENSTRUG00000024586	-	76	71.951	ENSPREG00000018102	rbm42	100	73.775	Poecilia_reticulata
ENSTRUG00000024586	-	76	77.531	ENSPNYG00000014460	rbm42	100	78.818	Pundamilia_nyererei
ENSTRUG00000024586	-	76	64.634	ENSPNAG00000009961	rbm42	100	66.901	Pygocentrus_nattereri
ENSTRUG00000024586	-	76	64.941	ENSSFOG00015019227	rbm42	100	64.471	Scleropages_formosus
ENSTRUG00000024586	-	76	76.167	ENSSMAG00000011935	rbm42	100	77.641	Scophthalmus_maximus
ENSTRUG00000024586	-	76	80.049	ENSSDUG00000004033	rbm42	100	81.034	Seriola_dumerili
ENSTRUG00000024586	-	76	72.750	ENSSLDG00000009918	rbm42	100	85.882	Seriola_lalandi_dorsalis
ENSTRUG00000024586	-	76	78.818	ENSSPAG00000019871	rbm42	100	79.803	Stegastes_partitus
ENSTRUG00000024586	-	76	73.733	ENSTNIG00000011669	rbm42	100	75.806	Tetraodon_nigroviridis
ENSTRUG00000024586	-	76	55.263	ENSXETG00000017599	rbm42	100	54.460	Xenopus_tropicalis
ENSTRUG00000024586	-	76	71.117	ENSXMAG00000012827	rbm42	100	73.058	Xiphophorus_maculatus