EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2229 bases
Position: chrHE592040.1:5782-8010
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053850	zf-CCHC	PF00098.23	2.4e-10	1	2
ENSTRUP00000053850	zf-CCHC	PF00098.23	2.4e-10	2	2
ENSTRUP00000053850	PAP_assoc	PF03828.19	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055466	-	1200	-	ENSTRUP00000053850	399 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000024719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024719	-	76	63.578	ENSTRUG00000023807	-	90	63.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024719	-	100	58.405	ENSG00000134744	TUT4	92	55.255	Homo_sapiens
ENSTRUG00000024719	-	81	86.810	ENSAPOG00000018983	-	96	86.810	Acanthochromis_polyacanthus
ENSTRUG00000024719	-	78	50.000	ENSACIG00000018887	-	90	55.389	Amphilophus_citrinellus
ENSTRUG00000024719	-	98	70.998	ENSACIG00000018199	TUT4	58	70.998	Amphilophus_citrinellus
ENSTRUG00000024719	-	73	63.036	ENSATEG00000022516	-	93	63.036	Anabas_testudineus
ENSTRUG00000024719	-	99	60.491	ENSCAFG00020010923	-	70	60.491	Canis_lupus_dingo
ENSTRUG00000024719	-	82	53.030	ENSCCAG00000025142	-	100	53.535	Cebus_capucinus
ENSTRUG00000024719	-	98	72.158	ENSCSEG00000002476	TUT4	59	72.158	Cynoglossus_semilaevis
ENSTRUG00000024719	-	100	66.136	ENSDARG00000101404	CABZ01065131.1	61	66.136	Danio_rerio
ENSTRUG00000024719	-	98	70.766	ENSFHEG00000002296	-	59	70.766	Fundulus_heteroclitus
ENSTRUG00000024719	-	98	71.462	ENSGAFG00000011427	-	60	71.462	Gambusia_affinis
ENSTRUG00000024719	-	98	71.694	ENSHBUG00000008564	-	62	71.694	Haplochromis_burtoni
ENSTRUG00000024719	-	96	70.379	ENSHCOG00000009746	-	57	70.379	Hippocampus_comes
ENSTRUG00000024719	-	61	75.102	ENSIPUG00000002120	-	94	75.102	Ictalurus_punctatus
ENSTRUG00000024719	-	96	72.813	ENSKMAG00000017970	TUT4	57	72.813	Kryptolebias_marmoratus
ENSTRUG00000024719	-	78	47.354	ENSMMOG00000017546	-	50	47.354	Mola_mola
ENSTRUG00000024719	-	98	73.318	ENSMMOG00000016870	-	64	73.318	Mola_mola
ENSTRUG00000024719	-	98	71.926	ENSMALG00000014488	-	58	71.926	Monopterus_albus
ENSTRUG00000024719	-	98	71.694	ENSNBRG00000005683	-	61	71.694	Neolamprologus_brichardi
ENSTRUG00000024719	-	98	70.070	ENSORLG00000013135	-	63	69.746	Oryzias_latipes
ENSTRUG00000024719	-	99	69.515	ENSORLG00020002631	-	63	69.515	Oryzias_latipes_hni
ENSTRUG00000024719	-	98	70.534	ENSORLG00015001219	-	63	70.534	Oryzias_latipes_hsok
ENSTRUG00000024719	-	99	68.129	ENSOMEG00000015574	-	61	68.445	Oryzias_melastigma
ENSTRUG00000024719	-	100	66.143	ENSPKIG00000004670	TUT4	57	66.143	Paramormyrops_kingsleyae
ENSTRUG00000024719	-	81	75.535	ENSPMGG00000015621	-	61	75.535	Periophthalmus_magnuspinnatus
ENSTRUG00000024719	-	98	71.694	ENSPLAG00000008701	-	60	71.694	Poecilia_latipinna
ENSTRUG00000024719	-	98	71.462	ENSPMEG00000006996	-	60	71.462	Poecilia_mexicana
ENSTRUG00000024719	-	82	52.778	ENSSBOG00000020099	-	98	55.526	Saimiri_boliviensis_boliviensis
ENSTRUG00000024719	-	98	73.086	ENSSDUG00000021923	TUT4	57	73.086	Seriola_dumerili
ENSTRUG00000024719	-	98	72.040	ENSSPAG00000008141	-	55	72.040	Stegastes_partitus
ENSTRUG00000024719	-	100	59.130	ENSUAMG00000000759	TUT4	57	66.929	Ursus_americanus
ENSTRUG00000024719	-	99	60.491	ENSVVUG00000002703	TUT4	66	60.491	Vulpes_vulpes
ENSTRUG00000024719	-	98	70.998	ENSXCOG00000007204	-	60	70.998	Xiphophorus_couchianus
ENSTRUG00000024719	-	98	71.230	ENSXMAG00000000751	-	60	71.230	Xiphophorus_maculatus