EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024725 (Gene tree)
Gene ID: 101063888
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4385 bases
Position: chr13:13475463-13479847
Accession: 101063888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000050987	RRM_1	PF00076.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053083	PABPN1L-201	2708	XM_003969674	ENSTRUP00000050987	234 (aa)	XP_003969723	UPI0005D1B14F

Gene Model

Click here to download ENSTRUG00000024725's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024725	PABPN1L	83	54.327	ENSTRUG00000023664	pabpn1	63	62.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024725	PABPN1L	81	52.427	ENSG00000205022	PABPN1L	58	55.152	Homo_sapiens
ENSTRUG00000024725	PABPN1L	90	80.833	ENSAPOG00000000685	PABPN1L	78	81.250	Acanthochromis_polyacanthus
ENSTRUG00000024725	PABPN1L	90	75.630	ENSACIG00000021400	PABPN1L	97	83.815	Amphilophus_citrinellus
ENSTRUG00000024725	PABPN1L	100	80.989	ENSAOCG00000019844	PABPN1L	100	80.989	Amphiprion_ocellaris
ENSTRUG00000024725	PABPN1L	100	80.608	ENSAPEG00000019534	PABPN1L	100	80.608	Amphiprion_percula
ENSTRUG00000024725	PABPN1L	92	80.247	ENSATEG00000011646	PABPN1L	95	81.513	Anabas_testudineus
ENSTRUG00000024725	PABPN1L	53	55.906	ENSAPLG00000009174	PABPN1L	94	58.929	Anas_platyrhynchos
ENSTRUG00000024725	PABPN1L	74	55.172	ENSACAG00000013250	PABPN1L	74	57.639	Anolis_carolinensis
ENSTRUG00000024725	PABPN1L	79	52.475	ENSANAG00000038178	PABPN1L	61	52.907	Aotus_nancymaae
ENSTRUG00000024725	PABPN1L	100	77.863	ENSACLG00000025147	PABPN1L	100	79.008	Astatotilapia_calliptera
ENSTRUG00000024725	PABPN1L	62	72.222	ENSAMXG00000010873	PABPN1L	55	70.833	Astyanax_mexicanus
ENSTRUG00000024725	PABPN1L	70	47.561	ENSBTAG00000023752	-	57	46.203	Bos_taurus
ENSTRUG00000024725	PABPN1L	79	52.261	ENSCJAG00000045284	PABPN1L	60	52.121	Callithrix_jacchus
ENSTRUG00000024725	PABPN1L	71	44.633	ENSCHIG00000013987	PABPN1L	59	43.195	Capra_hircus
ENSTRUG00000024725	PABPN1L	82	45.673	ENSCAPG00000007240	PABPN1L	67	45.856	Cavia_aperea
ENSTRUG00000024725	PABPN1L	77	47.090	ENSCPOG00000025951	PABPN1L	62	47.977	Cavia_porcellus
ENSTRUG00000024725	PABPN1L	79	52.239	ENSCCAG00000027631	PABPN1L	58	53.374	Cebus_capucinus
ENSTRUG00000024725	PABPN1L	81	52.153	ENSCATG00000031060	PABPN1L	59	54.167	Cercocebus_atys
ENSTRUG00000024725	PABPN1L	65	50.932	ENSCLAG00000000704	PABPN1L	65	45.902	Chinchilla_lanigera
ENSTRUG00000024725	PABPN1L	80	45.894	ENSCGRG00001013211	Pabpn1l	64	46.154	Cricetulus_griseus_chok1gshd
ENSTRUG00000024725	PABPN1L	80	45.894	ENSCGRG00000015868	Pabpn1l	64	46.154	Cricetulus_griseus_crigri
ENSTRUG00000024725	PABPN1L	100	75.285	ENSCSEG00000001142	pabpn1l	100	75.285	Cynoglossus_semilaevis
ENSTRUG00000024725	PABPN1L	100	77.947	ENSCVAG00000015547	PABPN1L	100	79.468	Cyprinodon_variegatus
ENSTRUG00000024725	PABPN1L	78	51.613	ENSDNOG00000034677	PABPN1L	58	53.503	Dasypus_novemcinctus
ENSTRUG00000024725	PABPN1L	81	49.239	ENSEASG00005000777	PABPN1L	61	51.515	Equus_asinus_asinus
ENSTRUG00000024725	PABPN1L	81	49.744	ENSECAG00000000378	PABPN1L	61	52.147	Equus_caballus
ENSTRUG00000024725	PABPN1L	91	67.757	ENSELUG00000018385	PABPN1L	81	67.290	Esox_lucius
ENSTRUG00000024725	PABPN1L	70	51.462	ENSFCAG00000010465	PABPN1L	59	51.515	Felis_catus
ENSTRUG00000024725	PABPN1L	78	55.026	ENSFALG00000003319	PABPN1L	62	55.769	Ficedula_albicollis
ENSTRUG00000024725	PABPN1L	65	53.797	ENSFDAG00000021067	PABPN1L	60	50.909	Fukomys_damarensis
ENSTRUG00000024725	PABPN1L	100	78.244	ENSFHEG00000018295	PABPN1L	100	78.244	Fundulus_heteroclitus
ENSTRUG00000024725	PABPN1L	100	65.414	ENSGMOG00000001475	PABPN1L	100	66.541	Gadus_morhua
ENSTRUG00000024725	PABPN1L	62	60.417	ENSGALG00000006242	PABPN1L	70	60.000	Gallus_gallus
ENSTRUG00000024725	PABPN1L	100	77.947	ENSGAFG00000012565	PABPN1L	100	79.468	Gambusia_affinis
ENSTRUG00000024725	PABPN1L	100	74.906	ENSGACG00000015428	PABPN1L	100	74.906	Gasterosteus_aculeatus
ENSTRUG00000024725	PABPN1L	81	52.632	ENSGGOG00000012670	PABPN1L	59	55.357	Gorilla_gorilla
ENSTRUG00000024725	PABPN1L	100	79.008	ENSHBUG00000002388	PABPN1L	100	79.008	Haplochromis_burtoni
ENSTRUG00000024725	PABPN1L	100	75.373	ENSHCOG00000004151	PABPN1L	99	75.373	Hippocampus_comes
ENSTRUG00000024725	PABPN1L	74	63.187	ENSIPUG00000023583	PABPN1L	73	67.333	Ictalurus_punctatus
ENSTRUG00000024725	PABPN1L	70	51.462	ENSSTOG00000020814	PABPN1L	51	53.472	Ictidomys_tridecemlineatus
ENSTRUG00000024725	PABPN1L	81	47.475	ENSJJAG00000006433	Pabpn1l	58	50.610	Jaculus_jaculus
ENSTRUG00000024725	PABPN1L	80	79.070	ENSKMAG00000001112	PABPN1L	96	78.802	Kryptolebias_marmoratus
ENSTRUG00000024725	PABPN1L	100	76.604	ENSLBEG00000011647	PABPN1L	97	78.491	Labrus_bergylta
ENSTRUG00000024725	PABPN1L	80	53.398	ENSMFAG00000002924	PABPN1L	59	55.090	Macaca_fascicularis
ENSTRUG00000024725	PABPN1L	81	53.140	ENSMMUG00000012438	PABPN1L	59	54.819	Macaca_mulatta
ENSTRUG00000024725	PABPN1L	80	53.398	ENSMNEG00000044808	PABPN1L	59	55.090	Macaca_nemestrina
ENSTRUG00000024725	PABPN1L	80	51.942	ENSMLEG00000032667	PABPN1L	59	53.892	Mandrillus_leucophaeus
ENSTRUG00000024725	PABPN1L	100	77.863	ENSMZEG00005002186	PABPN1L	100	79.008	Maylandia_zebra
ENSTRUG00000024725	PABPN1L	71	48.023	ENSMAUG00000014032	Pabpn1l	67	47.458	Mesocricetus_auratus
ENSTRUG00000024725	PABPN1L	80	49.010	ENSMICG00000028179	PABPN1L	59	50.307	Microcebus_murinus
ENSTRUG00000024725	PABPN1L	80	44.444	ENSMOCG00000007955	Pabpn1l	60	45.679	Microtus_ochrogaster
ENSTRUG00000024725	PABPN1L	72	81.313	ENSMMOG00000017714	PABPN1L	86	81.313	Mola_mola
ENSTRUG00000024725	PABPN1L	76	48.936	ENSMODG00000003873	-	61	48.810	Monodelphis_domestica
ENSTRUG00000024725	PABPN1L	100	78.244	ENSMALG00000016926	PABPN1L	100	78.244	Monopterus_albus
ENSTRUG00000024725	PABPN1L	80	42.342	MGP_CAROLIEiJ_G0031670	Pabpn1l	64	45.856	Mus_caroli
ENSTRUG00000024725	PABPN1L	74	47.312	ENSMUSG00000069867	Pabpn1l	64	46.409	Mus_musculus
ENSTRUG00000024725	PABPN1L	80	43.243	MGP_PahariEiJ_G0023268	Pabpn1l	64	46.961	Mus_pahari
ENSTRUG00000024725	PABPN1L	74	46.774	MGP_SPRETEiJ_G0032788	Pabpn1l	64	45.856	Mus_spretus
ENSTRUG00000024725	PABPN1L	89	79.747	ENSNBRG00000017078	PABPN1L	100	79.747	Neolamprologus_brichardi
ENSTRUG00000024725	PABPN1L	76	49.500	ENSOPRG00000005597	PABPN1L	59	50.307	Ochotona_princeps
ENSTRUG00000024725	PABPN1L	75	55.682	ENSOANG00000013901	PABPN1L	59	54.601	Ornithorhynchus_anatinus
ENSTRUG00000024725	PABPN1L	100	73.664	ENSORLG00000026560	PABPN1L	100	73.664	Oryzias_latipes
ENSTRUG00000024725	PABPN1L	100	73.282	ENSORLG00020015068	PABPN1L	100	73.282	Oryzias_latipes_hni
ENSTRUG00000024725	PABPN1L	100	73.664	ENSORLG00015000397	PABPN1L	100	73.664	Oryzias_latipes_hsok
ENSTRUG00000024725	PABPN1L	100	72.243	ENSOMEG00000017896	PABPN1L	72	72.243	Oryzias_melastigma
ENSTRUG00000024725	PABPN1L	80	49.761	ENSOGAG00000000433	PABPN1L	55	50.296	Otolemur_garnettii
ENSTRUG00000024725	PABPN1L	81	51.675	ENSPPAG00000028866	PABPN1L	58	54.167	Pan_paniscus
ENSTRUG00000024725	PABPN1L	70	51.176	ENSPPRG00000015106	PABPN1L	59	50.000	Panthera_pardus
ENSTRUG00000024725	PABPN1L	80	50.532	ENSPTIG00000015606	PABPN1L	61	52.201	Panthera_tigris_altaica
ENSTRUG00000024725	PABPN1L	81	51.675	ENSPTRG00000031120	PABPN1L	58	54.167	Pan_troglodytes
ENSTRUG00000024725	PABPN1L	79	52.683	ENSPANG00000026039	PABPN1L	59	54.819	Papio_anubis
ENSTRUG00000024725	PABPN1L	68	62.424	ENSPSIG00000003404	PABPN1L	76	59.211	Pelodiscus_sinensis
ENSTRUG00000024725	PABPN1L	79	74.648	ENSPMGG00000013927	PABPN1L	96	74.194	Periophthalmus_magnuspinnatus
ENSTRUG00000024725	PABPN1L	84	45.946	ENSPEMG00000016624	Pabpn1l	65	48.603	Peromyscus_maniculatus_bairdii
ENSTRUG00000024725	PABPN1L	56	63.433	ENSPCIG00000007038	-	67	71.134	Phascolarctos_cinereus
ENSTRUG00000024725	PABPN1L	100	78.327	ENSPFOG00000007001	PABPN1L	100	79.848	Poecilia_formosa
ENSTRUG00000024725	PABPN1L	100	78.327	ENSPLAG00000018431	PABPN1L	100	79.848	Poecilia_latipinna
ENSTRUG00000024725	PABPN1L	100	78.327	ENSPMEG00000009108	PABPN1L	100	79.848	Poecilia_mexicana
ENSTRUG00000024725	PABPN1L	65	72.283	ENSPMEG00000000169	-	91	72.283	Poecilia_mexicana
ENSTRUG00000024725	PABPN1L	80	80.093	ENSPREG00000022533	PABPN1L	100	80.519	Poecilia_reticulata
ENSTRUG00000024725	PABPN1L	81	51.675	ENSPPYG00000007655	PABPN1L	58	54.167	Pongo_abelii
ENSTRUG00000024725	PABPN1L	77	49.746	ENSPCOG00000024077	PABPN1L	58	51.572	Propithecus_coquereli
ENSTRUG00000024725	PABPN1L	81	50.769	ENSPVAG00000002716	PABPN1L	58	52.761	Pteropus_vampyrus
ENSTRUG00000024725	PABPN1L	100	77.863	ENSPNYG00000004803	PABPN1L	100	79.008	Pundamilia_nyererei
ENSTRUG00000024725	PABPN1L	84	46.226	ENSRNOG00000029558	Pabpn1l	65	48.045	Rattus_norvegicus
ENSTRUG00000024725	PABPN1L	81	51.675	ENSRBIG00000030740	PABPN1L	59	54.167	Rhinopithecus_bieti
ENSTRUG00000024725	PABPN1L	81	51.923	ENSRROG00000035483	-	59	53.892	Rhinopithecus_roxellana
ENSTRUG00000024725	PABPN1L	81	51.675	ENSRROG00000032240	-	59	54.167	Rhinopithecus_roxellana
ENSTRUG00000024725	PABPN1L	80	52.475	ENSSBOG00000018410	PABPN1L	58	53.988	Saimiri_boliviensis_boliviensis
ENSTRUG00000024725	PABPN1L	71	54.286	ENSSHAG00000010001	-	54	54.545	Sarcophilus_harrisii
ENSTRUG00000024725	PABPN1L	100	76.119	ENSSMAG00000021348	PABPN1L	100	75.373	Scophthalmus_maximus
ENSTRUG00000024725	PABPN1L	100	80.989	ENSSDUG00000006986	PABPN1L	100	80.989	Seriola_dumerili
ENSTRUG00000024725	PABPN1L	100	81.369	ENSSLDG00000021845	PABPN1L	100	81.369	Seriola_lalandi_dorsalis
ENSTRUG00000024725	PABPN1L	64	63.087	ENSSPUG00000007031	PABPN1L	63	59.864	Sphenodon_punctatus
ENSTRUG00000024725	PABPN1L	100	81.369	ENSSPAG00000017978	PABPN1L	100	81.369	Stegastes_partitus
ENSTRUG00000024725	PABPN1L	84	44.500	ENSSSCG00000036367	PABPN1L	59	51.852	Sus_scrofa
ENSTRUG00000024725	PABPN1L	70	83.854	ENSTNIG00000009416	PABPN1L	100	83.854	Tetraodon_nigroviridis
ENSTRUG00000024725	PABPN1L	63	55.215	ENSXETG00000011258	pabpn1l	72	52.121	Xenopus_tropicalis
ENSTRUG00000024725	PABPN1L	76	79.710	ENSXCOG00000003254	PABPN1L	100	80.087	Xiphophorus_couchianus
ENSTRUG00000024725	PABPN1L	79	75.587	ENSXMAG00000029090	PABPN1L	96	75.115	Xiphophorus_maculatus