EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024954 (Gene tree)
Gene ID: 101068221
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 10701 bases
Position: chr3:10657171-10667871
Accession: 101068221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000056654	RRM_1	PF00076.22	3.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051342	-	2946	XM_003963432	ENSTRUP00000056654	246 (aa)	XP_003963481	UPI0002989E9B

Gene Model

Click here to download ENSTRUG00000024954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024954	rbm38	55	72.794	ENSTRUG00000014826	rbm24b	80	63.298
ENSTRUG00000024954	rbm38	62	70.968	ENSTRUG00000010089	rbm24a	100	56.098
ENSTRUG00000024954	rbm38	94	63.636	ENSTRUG00000019869	-	96	63.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024954	rbm38	91	55.895	ENSG00000132819	RBM38	94	81.197	Homo_sapiens
ENSTRUG00000024954	rbm38	97	64.228	ENSAPOG00000009939	-	98	64.634	Acanthochromis_polyacanthus
ENSTRUG00000024954	rbm38	100	86.000	ENSAPOG00000003301	rbm38	100	85.600	Acanthochromis_polyacanthus
ENSTRUG00000024954	rbm38	100	84.800	ENSACIG00000000010	rbm38	100	84.000	Amphilophus_citrinellus
ENSTRUG00000024954	rbm38	94	64.583	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSTRUG00000024954	rbm38	93	65.385	ENSAOCG00000012559	RBM38	96	66.239	Amphiprion_ocellaris
ENSTRUG00000024954	rbm38	100	85.600	ENSAOCG00000013497	-	100	85.200	Amphiprion_ocellaris
ENSTRUG00000024954	rbm38	100	85.600	ENSAPEG00000013137	rbm38	100	85.200	Amphiprion_percula
ENSTRUG00000024954	rbm38	97	63.821	ENSAPEG00000023581	-	98	64.634	Amphiprion_percula
ENSTRUG00000024954	rbm38	97	63.821	ENSATEG00000016710	-	98	64.228	Anabas_testudineus
ENSTRUG00000024954	rbm38	100	83.200	ENSATEG00000016366	rbm38	100	82.000	Anabas_testudineus
ENSTRUG00000024954	rbm38	93	59.402	ENSACAG00000016238	RBM38	90	58.120	Anolis_carolinensis
ENSTRUG00000024954	rbm38	91	56.332	ENSANAG00000031959	RBM38	78	88.298	Aotus_nancymaae
ENSTRUG00000024954	rbm38	94	65.833	ENSACLG00000019514	-	96	63.750	Astatotilapia_calliptera
ENSTRUG00000024954	rbm38	97	60.331	ENSAMXG00000015601	-	98	61.157	Astyanax_mexicanus
ENSTRUG00000024954	rbm38	93	57.391	ENSAMXG00000038120	rbm38	94	57.391	Astyanax_mexicanus
ENSTRUG00000024954	rbm38	91	56.332	ENSBTAG00000008105	RBM38	89	56.769	Bos_taurus
ENSTRUG00000024954	rbm38	59	59.310	WBGene00006321	sup-12	73	70.270	Caenorhabditis_elegans
ENSTRUG00000024954	rbm38	91	55.895	ENSCJAG00000019139	RBM38	78	88.298	Callithrix_jacchus
ENSTRUG00000024954	rbm38	91	56.332	ENSCAFG00020021943	RBM38	89	56.769	Canis_lupus_dingo
ENSTRUG00000024954	rbm38	91	55.895	ENSCHIG00000002609	RBM38	89	55.895	Capra_hircus
ENSTRUG00000024954	rbm38	91	56.769	ENSCPOG00000012781	RBM38	89	57.205	Cavia_porcellus
ENSTRUG00000024954	rbm38	91	55.895	ENSCCAG00000036872	RBM38	78	88.298	Cebus_capucinus
ENSTRUG00000024954	rbm38	91	56.332	ENSCATG00000032133	RBM38	78	88.298	Cercocebus_atys
ENSTRUG00000024954	rbm38	91	56.769	ENSCLAG00000005906	RBM38	92	57.205	Chinchilla_lanigera
ENSTRUG00000024954	rbm38	91	56.332	ENSCSAG00000015503	RBM38	89	55.459	Chlorocebus_sabaeus
ENSTRUG00000024954	rbm38	80	63.547	ENSCPBG00000024059	RBM38	84	66.138	Chrysemys_picta_bellii
ENSTRUG00000024954	rbm38	83	47.549	ENSCANG00000030105	-	67	50.000	Colobus_angolensis_palliatus
ENSTRUG00000024954	rbm38	73	64.481	ENSCGRG00001012928	Rbm38	89	56.332	Cricetulus_griseus_chok1gshd
ENSTRUG00000024954	rbm38	97	61.789	ENSCSEG00000004701	-	98	61.789	Cynoglossus_semilaevis
ENSTRUG00000024954	rbm38	87	67.290	ENSCSEG00000020943	rbm38	62	71.658	Cynoglossus_semilaevis
ENSTRUG00000024954	rbm38	100	78.000	ENSCVAG00000015952	rbm38	100	77.200	Cyprinodon_variegatus
ENSTRUG00000024954	rbm38	94	63.333	ENSCVAG00000005472	-	96	63.333	Cyprinodon_variegatus
ENSTRUG00000024954	rbm38	96	61.728	ENSDARG00000058818	rbm38	98	62.343	Danio_rerio
ENSTRUG00000024954	rbm38	77	62.371	ENSDNOG00000032004	RBM38	85	63.934	Dasypus_novemcinctus
ENSTRUG00000024954	rbm38	91	57.205	ENSECAG00000007700	RBM38	89	55.895	Equus_caballus
ENSTRUG00000024954	rbm38	67	67.665	ENSEEUG00000013489	RBM38	89	55.459	Erinaceus_europaeus
ENSTRUG00000024954	rbm38	97	65.182	ENSELUG00000005849	-	98	63.968	Esox_lucius
ENSTRUG00000024954	rbm38	91	69.130	ENSELUG00000000585	-	99	68.261	Esox_lucius
ENSTRUG00000024954	rbm38	75	62.234	ENSFCAG00000042916	RBM38	81	84.848	Felis_catus
ENSTRUG00000024954	rbm38	71	68.539	ENSFALG00000010805	RBM38	90	67.797	Ficedula_albicollis
ENSTRUG00000024954	rbm38	100	80.080	ENSFHEG00000017748	rbm38	100	79.681	Fundulus_heteroclitus
ENSTRUG00000024954	rbm38	94	62.705	ENSFHEG00000006160	-	96	62.705	Fundulus_heteroclitus
ENSTRUG00000024954	rbm38	76	69.474	ENSGMOG00000016655	-	97	73.770	Gadus_morhua
ENSTRUG00000024954	rbm38	93	58.475	ENSGALG00000026081	RBM38	100	58.475	Gallus_gallus
ENSTRUG00000024954	rbm38	93	63.519	ENSGACG00000009873	-	100	62.661	Gasterosteus_aculeatus
ENSTRUG00000024954	rbm38	93	77.293	ENSGACG00000015224	rbm38	100	77.293	Gasterosteus_aculeatus
ENSTRUG00000024954	rbm38	80	64.039	ENSGAGG00000001187	RBM38	84	66.667	Gopherus_agassizii
ENSTRUG00000024954	rbm38	100	84.000	ENSHBUG00000012058	rbm38	100	83.200	Haplochromis_burtoni
ENSTRUG00000024954	rbm38	94	65.833	ENSHBUG00000011778	-	96	64.135	Haplochromis_burtoni
ENSTRUG00000024954	rbm38	91	56.332	ENSHGLG00000015077	RBM38	75	63.934	Heterocephalus_glaber_female
ENSTRUG00000024954	rbm38	86	67.290	ENSHCOG00000005622	-	57	68.812	Hippocampus_comes
ENSTRUG00000024954	rbm38	100	60.558	ENSHCOG00000019040	rbm38	100	60.159	Hippocampus_comes
ENSTRUG00000024954	rbm38	94	61.864	ENSIPUG00000019349	-	96	61.441	Ictalurus_punctatus
ENSTRUG00000024954	rbm38	91	67.811	ENSKMAG00000012402	rbm38	99	67.382	Kryptolebias_marmoratus
ENSTRUG00000024954	rbm38	97	64.198	ENSLBEG00000016163	RBM38	98	63.786	Labrus_bergylta
ENSTRUG00000024954	rbm38	100	85.600	ENSLBEG00000018878	rbm38	100	85.200	Labrus_bergylta
ENSTRUG00000024954	rbm38	97	63.900	ENSLOCG00000003456	rbm38	98	62.656	Lepisosteus_oculatus
ENSTRUG00000024954	rbm38	91	56.332	ENSMFAG00000043808	RBM38	78	88.298	Macaca_fascicularis
ENSTRUG00000024954	rbm38	91	56.332	ENSMMUG00000031391	RBM38	78	88.298	Macaca_mulatta
ENSTRUG00000024954	rbm38	91	56.332	ENSMNEG00000034683	RBM38	78	88.298	Macaca_nemestrina
ENSTRUG00000024954	rbm38	100	86.000	ENSMAMG00000024135	rbm38	100	85.600	Mastacembelus_armatus
ENSTRUG00000024954	rbm38	97	65.306	ENSMAMG00000020499	RBM38	98	65.714	Mastacembelus_armatus
ENSTRUG00000024954	rbm38	94	65.833	ENSMZEG00005000849	-	96	64.135	Maylandia_zebra
ENSTRUG00000024954	rbm38	100	84.000	ENSMZEG00005026036	rbm38	100	83.200	Maylandia_zebra
ENSTRUG00000024954	rbm38	73	63.934	ENSMAUG00000021211	Rbm38	89	56.332	Mesocricetus_auratus
ENSTRUG00000024954	rbm38	91	55.895	ENSMICG00000038011	RBM38	83	63.934	Microcebus_murinus
ENSTRUG00000024954	rbm38	73	63.934	ENSMOCG00000008715	Rbm38	89	56.332	Microtus_ochrogaster
ENSTRUG00000024954	rbm38	97	64.634	ENSMMOG00000020051	-	98	65.041	Mola_mola
ENSTRUG00000024954	rbm38	95	57.322	ENSMODG00000016458	RBM38	94	57.741	Monodelphis_domestica
ENSTRUG00000024954	rbm38	100	72.177	ENSMALG00000022327	rbm38	100	69.412	Monopterus_albus
ENSTRUG00000024954	rbm38	76	73.158	ENSMALG00000004680	RBM38	71	73.158	Monopterus_albus
ENSTRUG00000024954	rbm38	91	55.895	MGP_CAROLIEiJ_G0024745	Rbm38	89	56.332	Mus_caroli
ENSTRUG00000024954	rbm38	91	55.895	ENSMUSG00000027510	Rbm38	89	56.332	Mus_musculus
ENSTRUG00000024954	rbm38	91	55.895	MGP_PahariEiJ_G0026186	Rbm38	89	56.332	Mus_pahari
ENSTRUG00000024954	rbm38	91	55.895	MGP_SPRETEiJ_G0025665	Rbm38	89	56.332	Mus_spretus
ENSTRUG00000024954	rbm38	73	63.388	ENSMPUG00000006518	RBM38	89	63.388	Mustela_putorius_furo
ENSTRUG00000024954	rbm38	91	55.459	ENSMLUG00000011140	RBM38	98	55.022	Myotis_lucifugus
ENSTRUG00000024954	rbm38	100	83.600	ENSNBRG00000022685	rbm38	100	82.800	Neolamprologus_brichardi
ENSTRUG00000024954	rbm38	94	65.833	ENSNBRG00000022545	-	96	63.750	Neolamprologus_brichardi
ENSTRUG00000024954	rbm38	50	71.311	ENSMEUG00000005475	-	91	71.311	Notamacropus_eugenii
ENSTRUG00000024954	rbm38	91	57.205	ENSODEG00000007980	RBM38	89	57.642	Octodon_degus
ENSTRUG00000024954	rbm38	98	84.082	ENSONIG00000017073	rbm38	100	83.265	Oreochromis_niloticus
ENSTRUG00000024954	rbm38	94	65.690	ENSONIG00000020324	-	96	63.598	Oreochromis_niloticus
ENSTRUG00000024954	rbm38	91	56.769	ENSOANG00000009259	RBM38	69	65.934	Ornithorhynchus_anatinus
ENSTRUG00000024954	rbm38	94	61.983	ENSORLG00000027180	-	96	63.223	Oryzias_latipes
ENSTRUG00000024954	rbm38	100	74.104	ENSORLG00000012154	rbm38	100	73.705	Oryzias_latipes
ENSTRUG00000024954	rbm38	94	61.983	ENSORLG00020020751	-	96	63.223	Oryzias_latipes_hni
ENSTRUG00000024954	rbm38	100	76.096	ENSORLG00020017871	rbm38	100	73.705	Oryzias_latipes_hni
ENSTRUG00000024954	rbm38	100	76.096	ENSORLG00015012606	rbm38	100	73.705	Oryzias_latipes_hsok
ENSTRUG00000024954	rbm38	94	62.241	ENSORLG00015017040	-	96	63.071	Oryzias_latipes_hsok
ENSTRUG00000024954	rbm38	100	74.900	ENSOMEG00000006805	rbm38	100	72.510	Oryzias_melastigma
ENSTRUG00000024954	rbm38	94	62.917	ENSOMEG00000023912	-	96	63.750	Oryzias_melastigma
ENSTRUG00000024954	rbm38	91	56.332	ENSOGAG00000029136	RBM38	88	56.769	Otolemur_garnettii
ENSTRUG00000024954	rbm38	75	62.234	ENSPPRG00000009507	RBM38	81	84.848	Panthera_pardus
ENSTRUG00000024954	rbm38	52	77.519	ENSPTRG00000045845	-	70	77.519	Pan_troglodytes
ENSTRUG00000024954	rbm38	78	62.245	ENSPTRG00000013661	RBM38	78	88.298	Pan_troglodytes
ENSTRUG00000024954	rbm38	85	47.393	ENSPANG00000033127	-	79	49.741	Papio_anubis
ENSTRUG00000024954	rbm38	91	56.332	ENSPANG00000020919	-	78	88.298	Papio_anubis
ENSTRUG00000024954	rbm38	97	61.983	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSTRUG00000024954	rbm38	100	58.893	ENSPKIG00000025417	rbm38	100	58.893	Paramormyrops_kingsleyae
ENSTRUG00000024954	rbm38	80	63.054	ENSPSIG00000011649	RBM38	78	65.608	Pelodiscus_sinensis
ENSTRUG00000024954	rbm38	100	72.112	ENSPMGG00000011343	rbm38	100	74.502	Periophthalmus_magnuspinnatus
ENSTRUG00000024954	rbm38	94	62.810	ENSPMGG00000017094	-	96	62.810	Periophthalmus_magnuspinnatus
ENSTRUG00000024954	rbm38	95	57.983	ENSPCIG00000013648	RBM38	94	57.741	Phascolarctos_cinereus
ENSTRUG00000024954	rbm38	100	75.591	ENSPFOG00000011658	rbm38	100	79.134	Poecilia_formosa
ENSTRUG00000024954	rbm38	94	61.983	ENSPLAG00000002500	-	96	62.656	Poecilia_latipinna
ENSTRUG00000024954	rbm38	100	75.591	ENSPLAG00000005218	rbm38	100	79.134	Poecilia_latipinna
ENSTRUG00000024954	rbm38	100	75.197	ENSPMEG00000015770	rbm38	100	78.740	Poecilia_mexicana
ENSTRUG00000024954	rbm38	100	75.197	ENSPREG00000007398	rbm38	100	78.740	Poecilia_reticulata
ENSTRUG00000024954	rbm38	91	56.332	ENSPCOG00000026201	RBM38	84	82.692	Propithecus_coquereli
ENSTRUG00000024954	rbm38	73	37.778	ENSPVAG00000006457	RBM38	89	35.841	Pteropus_vampyrus
ENSTRUG00000024954	rbm38	98	62.857	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSTRUG00000024954	rbm38	100	83.600	ENSPNYG00000021373	rbm38	100	82.800	Pundamilia_nyererei
ENSTRUG00000024954	rbm38	97	61.224	ENSPNAG00000015123	-	91	81.356	Pygocentrus_nattereri
ENSTRUG00000024954	rbm38	80	68.687	ENSPNAG00000010596	rbm38	80	69.231	Pygocentrus_nattereri
ENSTRUG00000024954	rbm38	91	57.205	ENSRNOG00000006420	Rbm38	89	55.895	Rattus_norvegicus
ENSTRUG00000024954	rbm38	91	48.458	ENSRROG00000036388	-	88	48.018	Rhinopithecus_roxellana
ENSTRUG00000024954	rbm38	91	55.895	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSTRUG00000024954	rbm38	94	60.593	ENSSFOG00015004453	rbm38	95	61.702	Scleropages_formosus
ENSTRUG00000024954	rbm38	100	86.400	ENSSDUG00000022611	rbm38	100	86.000	Seriola_dumerili
ENSTRUG00000024954	rbm38	97	64.228	ENSSDUG00000021082	RBM38	98	64.634	Seriola_dumerili
ENSTRUG00000024954	rbm38	100	86.400	ENSSLDG00000010845	rbm38	100	86.000	Seriola_lalandi_dorsalis
ENSTRUG00000024954	rbm38	97	64.228	ENSSLDG00000011778	RBM38	98	64.634	Seriola_lalandi_dorsalis
ENSTRUG00000024954	rbm38	100	85.200	ENSSPAG00000011113	rbm38	100	84.800	Stegastes_partitus
ENSTRUG00000024954	rbm38	97	64.634	ENSSPAG00000020989	RBM38	98	65.041	Stegastes_partitus
ENSTRUG00000024954	rbm38	91	56.332	ENSSSCG00000007504	RBM38	89	56.769	Sus_scrofa
ENSTRUG00000024954	rbm38	93	64.530	ENSTNIG00000007093	-	100	64.530	Tetraodon_nigroviridis
ENSTRUG00000024954	rbm38	75	62.234	ENSUAMG00000019780	RBM38	89	56.332	Ursus_americanus
ENSTRUG00000024954	rbm38	91	56.332	ENSVVUG00000017246	RBM38	89	56.769	Vulpes_vulpes
ENSTRUG00000024954	rbm38	76	65.789	ENSXETG00000011268	rbm38	99	57.741	Xenopus_tropicalis
ENSTRUG00000024954	rbm38	100	76.400	ENSXMAG00000023662	rbm38	100	80.000	Xiphophorus_maculatus