EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000024994 (Gene tree)
Gene ID: 101070538
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: ras-related protein ORAB-1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4305 bases
Position: chr17:4888354-4892658
Accession: 101070538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000049622	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052849	RAB1A-201	2676	XM_003972182	ENSTRUP00000049622	202 (aa)	XP_003972231	UPI000298F0C4

Gene Model

Click here to download ENSTRUG00000024994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000024994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000024994	RAB1A	81	32.143	ENSTRUG00000023011	rerg	82	32.143
ENSTRUG00000024994	RAB1A	79	39.264	ENSTRUG00000020093	-	79	39.264
ENSTRUG00000024994	RAB1A	80	66.049	ENSTRUG00000020633	rab35b	80	66.049
ENSTRUG00000024994	RAB1A	58	31.356	ENSTRUG00000011496	arl8bb	61	31.356
ENSTRUG00000024994	RAB1A	69	30.822	ENSTRUG00000019870	-	73	30.822
ENSTRUG00000024994	RAB1A	85	36.723	ENSTRUG00000024825	hrasb	93	36.723
ENSTRUG00000024994	RAB1A	83	49.704	ENSTRUG00000024455	rab12	70	49.704
ENSTRUG00000024994	RAB1A	98	45.455	ENSTRUG00000003363	rab2a	99	45.455
ENSTRUG00000024994	RAB1A	79	39.264	ENSTRUG00000010082	RAB7A	79	39.264
ENSTRUG00000024994	RAB1A	97	37.811	ENSTRUG00000008698	rab9a	97	37.811
ENSTRUG00000024994	RAB1A	78	36.076	ENSTRUG00000012454	rabl2	69	36.076
ENSTRUG00000024994	RAB1A	58	33.898	ENSTRUG00000013912	arl8a	61	33.898
ENSTRUG00000024994	RAB1A	79	30.303	ENSTRUG00000023427	dnajc27	60	30.303
ENSTRUG00000024994	RAB1A	85	30.814	ENSTRUG00000017384	rras2	81	32.927
ENSTRUG00000024994	RAB1A	80	32.716	ENSTRUG00000013749	ran	74	32.716
ENSTRUG00000024994	RAB1A	58	40.496	ENSTRUG00000005937	rab34a	54	40.496
ENSTRUG00000024994	RAB1A	99	50.000	ENSTRUG00000020792	rab11a	96	50.000
ENSTRUG00000024994	RAB1A	69	30.496	ENSTRUG00000018107	arl3	72	30.496
ENSTRUG00000024994	RAB1A	100	92.574	ENSTRUG00000004287	rab1ba	100	92.574
ENSTRUG00000024994	RAB1A	96	44.103	ENSTRUG00000004283	rab18b	95	44.103
ENSTRUG00000024994	RAB1A	84	49.704	ENSTRUG00000017824	rab15	79	49.704
ENSTRUG00000024994	RAB1A	82	48.795	ENSTRUG00000014783	RAB15	78	48.795
ENSTRUG00000024994	RAB1A	77	40.881	ENSTRUG00000013963	RAB9A	79	40.881
ENSTRUG00000024994	RAB1A	95	30.097	ENSTRUG00000021970	rasl11b	83	30.097
ENSTRUG00000024994	RAB1A	87	34.270	ENSTRUG00000005805	mras	85	34.270
ENSTRUG00000024994	RAB1A	98	92.929	ENSTRUG00000023164	rab1ab	98	92.929
ENSTRUG00000024994	RAB1A	59	33.333	ENSTRUG00000023169	arl8ba	62	33.333
ENSTRUG00000024994	RAB1A	78	38.650	ENSTRUG00000010393	-	62	38.650
ENSTRUG00000024994	RAB1A	96	38.191	ENSTRUG00000009223	rab41	91	38.191
ENSTRUG00000024994	RAB1A	90	34.054	ENSTRUG00000015697	rab23	85	32.683
ENSTRUG00000024994	RAB1A	99	48.309	ENSTRUG00000007556	rab11al	96	48.309
ENSTRUG00000024994	RAB1A	87	41.573	ENSTRUG00000010224	rab42a	82	41.573
ENSTRUG00000024994	RAB1A	58	31.092	ENSTRUG00000003085	arl4cb	61	31.092
ENSTRUG00000024994	RAB1A	81	47.239	ENSTRUG00000015590	rab5c	89	43.077
ENSTRUG00000024994	RAB1A	98	44.828	ENSTRUG00000014595	-	96	44.828
ENSTRUG00000024994	RAB1A	99	44.498	ENSTRUG00000007504	rab25b	98	44.498
ENSTRUG00000024994	RAB1A	64	30.534	ENSTRUG00000018668	-	62	30.534
ENSTRUG00000024994	RAB1A	82	51.807	ENSTRUG00000022559	rab30	82	51.807
ENSTRUG00000024994	RAB1A	84	33.714	ENSTRUG00000004902	rheb	94	33.714
ENSTRUG00000024994	RAB1A	97	44.615	ENSTRUG00000011399	-	90	44.615
ENSTRUG00000024994	RAB1A	58	31.405	ENSTRUG00000024375	-	59	31.405
ENSTRUG00000024994	RAB1A	87	56.983	ENSTRUG00000024177	rab13	90	56.983
ENSTRUG00000024994	RAB1A	96	47.423	ENSTRUG00000004984	rab18a	93	47.423
ENSTRUG00000024994	RAB1A	95	42.857	ENSTRUG00000009903	zgc:101559	86	42.857
ENSTRUG00000024994	RAB1A	58	32.231	ENSTRUG00000005435	arl2	61	32.231
ENSTRUG00000024994	RAB1A	81	44.643	ENSTRUG00000020335	rab33a	65	44.643
ENSTRUG00000024994	RAB1A	80	60.494	ENSTRUG00000025076	si:dkey-16l2.16	91	67.241
ENSTRUG00000024994	RAB1A	58	30.328	ENSTRUG00000003183	-	61	30.328
ENSTRUG00000024994	RAB1A	99	47.368	ENSTRUG00000022029	rab11bb	96	47.368
ENSTRUG00000024994	RAB1A	96	37.629	ENSTRUG00000018380	rab22a	97	37.629
ENSTRUG00000024994	RAB1A	87	35.028	ENSTRUG00000020012	rhebl1	93	35.028
ENSTRUG00000024994	RAB1A	78	38.509	ENSTRUG00000014481	rab34b	65	38.509
ENSTRUG00000024994	RAB1A	85	44.086	ENSTRUG00000007036	rab33ba	77	44.086
ENSTRUG00000024994	RAB1A	96	38.776	ENSTRUG00000023252	rab6a	93	38.776
ENSTRUG00000024994	RAB1A	96	37.879	ENSTRUG00000004881	rab6bb	93	37.879
ENSTRUG00000024994	RAB1A	96	44.330	ENSTRUG00000024368	rab5aa	89	44.330
ENSTRUG00000024994	RAB1A	87	43.820	ENSTRUG00000025018	rab39bb	84	43.820
ENSTRUG00000024994	RAB1A	99	48.804	ENSTRUG00000021614	-	96	48.804
ENSTRUG00000024994	RAB1A	99	46.890	ENSTRUG00000021619	-	97	46.890
ENSTRUG00000024994	RAB1A	81	37.805	ENSTRUG00000023449	kras	95	35.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000024994	RAB1A	100	95.050	ENSG00000138069	RAB1A	98	100.000	Homo_sapiens
ENSTRUG00000024994	RAB1A	100	99.505	ENSAPOG00000008143	-	100	99.505	Acanthochromis_polyacanthus
ENSTRUG00000024994	RAB1A	100	95.050	ENSAMEG00000001127	RAB1A	99	95.050	Ailuropoda_melanoleuca
ENSTRUG00000024994	RAB1A	100	99.505	ENSAOCG00000020606	-	100	99.505	Amphiprion_ocellaris
ENSTRUG00000024994	RAB1A	100	99.505	ENSAPEG00000022488	-	100	99.505	Amphiprion_percula
ENSTRUG00000024994	RAB1A	100	95.050	ENSANAG00000020929	RAB1A	99	95.050	Aotus_nancymaae
ENSTRUG00000024994	RAB1A	100	99.010	ENSACLG00000003326	-	100	99.010	Astatotilapia_calliptera
ENSTRUG00000024994	RAB1A	100	92.079	ENSAMXG00000034850	-	100	92.079	Astyanax_mexicanus
ENSTRUG00000024994	RAB1A	100	95.050	ENSBTAG00000016720	RAB1A	99	95.050	Bos_taurus
ENSTRUG00000024994	RAB1A	100	95.050	ENSCJAG00000046275	RAB1A	99	95.050	Callithrix_jacchus
ENSTRUG00000024994	RAB1A	100	95.050	ENSCAFG00000003187	RAB1A	99	95.050	Canis_familiaris
ENSTRUG00000024994	RAB1A	100	95.050	ENSCAFG00020026971	RAB1A	99	95.050	Canis_lupus_dingo
ENSTRUG00000024994	RAB1A	98	94.924	ENSCHIG00000014060	RAB1A	100	92.195	Capra_hircus
ENSTRUG00000024994	RAB1A	100	93.564	ENSTSYG00000005996	RAB1A	100	94.924	Carlito_syrichta
ENSTRUG00000024994	RAB1A	100	95.050	ENSCPOG00000015437	RAB1A	99	95.050	Cavia_porcellus
ENSTRUG00000024994	RAB1A	100	95.050	ENSCCAG00000021869	RAB1A	99	95.050	Cebus_capucinus
ENSTRUG00000024994	RAB1A	100	95.050	ENSCATG00000030853	RAB1A	99	95.050	Cercocebus_atys
ENSTRUG00000024994	RAB1A	100	95.050	ENSCLAG00000014766	RAB1A	99	95.050	Chinchilla_lanigera
ENSTRUG00000024994	RAB1A	100	95.545	ENSCPBG00000013243	RAB1A	99	95.545	Chrysemys_picta_bellii
ENSTRUG00000024994	RAB1A	100	92.574	ENSCANG00000035916	RAB1A	99	92.574	Colobus_angolensis_palliatus
ENSTRUG00000024994	RAB1A	100	95.050	ENSCGRG00001012691	-	99	95.050	Cricetulus_griseus_chok1gshd
ENSTRUG00000024994	RAB1A	100	95.050	ENSCGRG00000008456	-	99	95.050	Cricetulus_griseus_crigri
ENSTRUG00000024994	RAB1A	100	95.050	ENSDNOG00000018236	RAB1A	99	95.050	Dasypus_novemcinctus
ENSTRUG00000024994	RAB1A	100	95.050	ENSDORG00000028628	-	99	95.050	Dipodomys_ordii
ENSTRUG00000024994	RAB1A	100	84.729	FBgn0285937	Rab1	99	84.729	Drosophila_melanogaster
ENSTRUG00000024994	RAB1A	100	95.050	ENSETEG00000002205	RAB1A	100	95.050	Echinops_telfairi
ENSTRUG00000024994	RAB1A	100	95.050	ENSEASG00005007298	RAB1A	99	95.050	Equus_asinus_asinus
ENSTRUG00000024994	RAB1A	100	95.050	ENSECAG00000009926	RAB1A	99	95.050	Equus_caballus
ENSTRUG00000024994	RAB1A	100	95.050	ENSEEUG00000011721	RAB1A	100	95.050	Erinaceus_europaeus
ENSTRUG00000024994	RAB1A	100	96.078	ENSELUG00000012166	RAB1A	96	96.078	Esox_lucius
ENSTRUG00000024994	RAB1A	100	95.050	ENSFCAG00000002536	RAB1A	99	95.050	Felis_catus
ENSTRUG00000024994	RAB1A	100	93.564	ENSFALG00000013624	RAB1A	99	93.564	Ficedula_albicollis
ENSTRUG00000024994	RAB1A	100	95.050	ENSFDAG00000019505	-	99	95.050	Fukomys_damarensis
ENSTRUG00000024994	RAB1A	100	98.515	ENSFHEG00000014414	-	100	98.515	Fundulus_heteroclitus
ENSTRUG00000024994	RAB1A	100	95.545	ENSGALG00000031582	RAB1A	99	95.545	Gallus_gallus
ENSTRUG00000024994	RAB1A	100	97.030	ENSGAFG00000000918	-	100	97.030	Gambusia_affinis
ENSTRUG00000024994	RAB1A	100	95.545	ENSGAGG00000006802	RAB1A	99	95.545	Gopherus_agassizii
ENSTRUG00000024994	RAB1A	100	95.050	ENSGGOG00000026603	RAB1A	99	95.050	Gorilla_gorilla
ENSTRUG00000024994	RAB1A	100	95.050	ENSHGLG00000013585	RAB1A	99	95.050	Heterocephalus_glaber_female
ENSTRUG00000024994	RAB1A	100	93.564	ENSHGLG00100007994	RAB1A	99	93.564	Heterocephalus_glaber_male
ENSTRUG00000024994	RAB1A	100	95.050	ENSSTOG00000020693	-	99	95.050	Ictidomys_tridecemlineatus
ENSTRUG00000024994	RAB1A	98	94.924	ENSJJAG00000014396	Rab1a	100	94.924	Jaculus_jaculus
ENSTRUG00000024994	RAB1A	98	98.985	ENSKMAG00000014038	-	93	98.985	Kryptolebias_marmoratus
ENSTRUG00000024994	RAB1A	100	98.515	ENSLBEG00000028426	RAB1A	100	98.515	Labrus_bergylta
ENSTRUG00000024994	RAB1A	100	96.040	ENSLACG00000012869	RAB1A	99	96.040	Latimeria_chalumnae
ENSTRUG00000024994	RAB1A	100	95.050	ENSLAFG00000016666	RAB1A	99	95.050	Loxodonta_africana
ENSTRUG00000024994	RAB1A	100	95.050	ENSMFAG00000046246	RAB1A	99	95.050	Macaca_fascicularis
ENSTRUG00000024994	RAB1A	98	94.924	ENSMMUG00000021721	RAB1A	91	94.924	Macaca_mulatta
ENSTRUG00000024994	RAB1A	95	96.335	ENSMNEG00000028414	-	96	96.335	Macaca_nemestrina
ENSTRUG00000024994	RAB1A	100	95.050	ENSMLEG00000042535	RAB1A	99	95.050	Mandrillus_leucophaeus
ENSTRUG00000024994	RAB1A	100	99.010	ENSMZEG00005013959	-	100	99.010	Maylandia_zebra
ENSTRUG00000024994	RAB1A	98	95.431	ENSMGAG00000004611	RAB1A	98	95.431	Meleagris_gallopavo
ENSTRUG00000024994	RAB1A	100	94.554	ENSMAUG00000012156	Rab1a	99	94.554	Mesocricetus_auratus
ENSTRUG00000024994	RAB1A	100	95.050	ENSMICG00000012587	RAB1A	99	95.050	Microcebus_murinus
ENSTRUG00000024994	RAB1A	100	94.554	ENSMOCG00000017022	Rab1a	99	94.554	Microtus_ochrogaster
ENSTRUG00000024994	RAB1A	100	96.535	ENSMMOG00000018709	RAB1A	100	96.535	Mola_mola
ENSTRUG00000024994	RAB1A	100	95.545	ENSMODG00000003340	RAB1A	99	95.545	Monodelphis_domestica
ENSTRUG00000024994	RAB1A	100	95.050	MGP_CAROLIEiJ_G0016115	Rab1a	99	95.050	Mus_caroli
ENSTRUG00000024994	RAB1A	100	95.050	ENSMUSG00000020149	Rab1a	100	95.050	Mus_musculus
ENSTRUG00000024994	RAB1A	100	95.050	MGP_PahariEiJ_G0016776	Rab1a	99	95.050	Mus_pahari
ENSTRUG00000024994	RAB1A	100	95.050	MGP_SPRETEiJ_G0016958	Rab1a	100	95.050	Mus_spretus
ENSTRUG00000024994	RAB1A	100	95.050	ENSMPUG00000006139	RAB1A	80	95.050	Mustela_putorius_furo
ENSTRUG00000024994	RAB1A	100	95.050	ENSMLUG00000009489	RAB1A	99	95.050	Myotis_lucifugus
ENSTRUG00000024994	RAB1A	100	95.050	ENSNGAG00000005838	Rab1a	99	95.050	Nannospalax_galili
ENSTRUG00000024994	RAB1A	100	99.010	ENSNBRG00000020492	-	100	99.010	Neolamprologus_brichardi
ENSTRUG00000024994	RAB1A	98	94.924	ENSOPRG00000006595	RAB1A	100	94.924	Ochotona_princeps
ENSTRUG00000024994	RAB1A	94	94.709	ENSODEG00000011248	-	96	94.792	Octodon_degus
ENSTRUG00000024994	RAB1A	100	97.030	ENSONIG00000006819	-	99	97.030	Oreochromis_niloticus
ENSTRUG00000024994	RAB1A	100	95.545	ENSOANG00000012438	RAB1A	99	95.545	Ornithorhynchus_anatinus
ENSTRUG00000024994	RAB1A	100	95.050	ENSOCUG00000017003	RAB1A	99	95.050	Oryctolagus_cuniculus
ENSTRUG00000024994	RAB1A	100	95.050	ENSOGAG00000026181	RAB1A	99	95.050	Otolemur_garnettii
ENSTRUG00000024994	RAB1A	98	94.924	ENSOARG00000019997	RAB1A	97	94.924	Ovis_aries
ENSTRUG00000024994	RAB1A	100	95.050	ENSPPAG00000030253	RAB1A	100	95.050	Pan_paniscus
ENSTRUG00000024994	RAB1A	100	95.050	ENSPPRG00000025077	RAB1A	99	95.050	Panthera_pardus
ENSTRUG00000024994	RAB1A	98	94.924	ENSPTIG00000013471	RAB1A	97	94.924	Panthera_tigris_altaica
ENSTRUG00000024994	RAB1A	100	95.050	ENSPTRG00000011989	RAB1A	99	95.050	Pan_troglodytes
ENSTRUG00000024994	RAB1A	100	95.050	ENSPANG00000010485	RAB1A	99	95.050	Papio_anubis
ENSTRUG00000024994	RAB1A	100	93.069	ENSPSIG00000008028	RAB1A	99	93.069	Pelodiscus_sinensis
ENSTRUG00000024994	RAB1A	100	98.515	ENSPMGG00000021015	-	99	98.515	Periophthalmus_magnuspinnatus
ENSTRUG00000024994	RAB1A	100	95.050	ENSPEMG00000009340	Rab1a	99	95.050	Peromyscus_maniculatus_bairdii
ENSTRUG00000024994	RAB1A	100	95.545	ENSPCIG00000023212	RAB1A	99	95.545	Phascolarctos_cinereus
ENSTRUG00000024994	RAB1A	100	96.535	ENSPFOG00000000498	-	98	96.535	Poecilia_formosa
ENSTRUG00000024994	RAB1A	100	96.535	ENSPLAG00000015592	-	100	96.535	Poecilia_latipinna
ENSTRUG00000024994	RAB1A	100	96.535	ENSPMEG00000005288	-	100	96.535	Poecilia_mexicana
ENSTRUG00000024994	RAB1A	100	95.050	ENSPPYG00000012360	RAB1A	99	95.050	Pongo_abelii
ENSTRUG00000024994	RAB1A	100	95.050	ENSPCOG00000017244	RAB1A	99	95.050	Propithecus_coquereli
ENSTRUG00000024994	RAB1A	100	99.010	ENSPNYG00000015841	-	100	99.010	Pundamilia_nyererei
ENSTRUG00000024994	RAB1A	100	95.050	ENSRNOG00000004992	Rab1a	99	95.050	Rattus_norvegicus
ENSTRUG00000024994	RAB1A	100	95.050	ENSSBOG00000023732	RAB1A	99	95.050	Saimiri_boliviensis_boliviensis
ENSTRUG00000024994	RAB1A	98	95.431	ENSSHAG00000003597	RAB1A	98	94.030	Sarcophilus_harrisii
ENSTRUG00000024994	RAB1A	100	99.010	ENSSMAG00000021049	-	100	99.010	Scophthalmus_maximus
ENSTRUG00000024994	RAB1A	100	99.010	ENSSDUG00000022535	RAB1A	100	99.010	Seriola_dumerili
ENSTRUG00000024994	RAB1A	100	95.545	ENSSPUG00000012822	RAB1A	99	95.545	Sphenodon_punctatus
ENSTRUG00000024994	RAB1A	100	99.505	ENSSPAG00000012564	-	100	99.505	Stegastes_partitus
ENSTRUG00000024994	RAB1A	100	95.050	ENSSSCG00000008359	RAB1A	100	94.924	Sus_scrofa
ENSTRUG00000024994	RAB1A	100	93.564	ENSTGUG00000002328	RAB1A	99	93.564	Taeniopygia_guttata
ENSTRUG00000024994	RAB1A	98	94.924	ENSUMAG00000021038	RAB1A	99	94.924	Ursus_maritimus
ENSTRUG00000024994	RAB1A	98	94.444	ENSVPAG00000005640	RAB1A	99	94.444	Vicugna_pacos
ENSTRUG00000024994	RAB1A	100	95.050	ENSVVUG00000027588	RAB1A	99	95.050	Vulpes_vulpes
ENSTRUG00000024994	RAB1A	100	97.030	ENSXMAG00000015776	-	100	97.030	Xiphophorus_maculatus