EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000025076 (Gene tree)
Gene ID: 101066302
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 8487 bases
Position: chrHE592116.1:13112-21598
Accession: 101066302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000007325	MMR_HSR1	PF01926.23	6.1e-08	1	1
ENSTRUP00000057456	MMR_HSR1	PF01926.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000053500	-	6348	XM_003976929	ENSTRUP00000057456	209 (aa)	XP_003976978	UPI000298CB91
ENSTRUT00000007370	-	381	-	ENSTRUP00000007325	126 (aa)	-	H2S4K3

Gene Model

Click here to download ENSTRUG00000025076's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000025076	si:dkey-16l2.16	83	32.381	ENSTRUG00000012454	rabl2	75	30.508
ENSTRUG00000025076	si:dkey-16l2.16	84	42.202	ENSTRUG00000004881	rab6bb	74	38.312
ENSTRUG00000025076	si:dkey-16l2.16	83	46.667	ENSTRUG00000011399	-	76	43.902
ENSTRUG00000025076	si:dkey-16l2.16	91	49.565	ENSTRUG00000020792	rab11a	91	43.077
ENSTRUG00000025076	si:dkey-16l2.16	90	67.544	ENSTRUG00000023164	rab1ab	79	61.250
ENSTRUG00000025076	si:dkey-16l2.16	83	33.654	ENSTRUG00000023449	kras	88	33.929
ENSTRUG00000025076	si:dkey-16l2.16	87	33.621	ENSTRUG00000023427	dnajc27	59	34.783
ENSTRUG00000025076	si:dkey-16l2.16	91	32.821	ENSTRUG00000014481	rab34b	67	34.337
ENSTRUG00000025076	si:dkey-16l2.16	82	31.818	ENSTRUG00000023011	rerg	83	31.737
ENSTRUG00000025076	si:dkey-16l2.16	83	50.000	ENSTRUG00000010224	rab42a	80	42.286
ENSTRUG00000025076	si:dkey-16l2.16	77	31.959	ENSTRUG00000018107	arl3	61	30.172
ENSTRUG00000025076	si:dkey-16l2.16	74	30.392	ENSTRUG00000007846	RABL3	80	30.392
ENSTRUG00000025076	si:dkey-16l2.16	87	53.211	ENSTRUG00000022559	rab30	88	47.191
ENSTRUG00000025076	si:dkey-16l2.16	59	48.649	ENSTRUG00000005937	rab34a	66	33.784
ENSTRUG00000025076	si:dkey-16l2.16	78	42.857	ENSTRUG00000023252	rab6a	74	38.312
ENSTRUG00000025076	si:dkey-16l2.16	89	33.036	ENSTRUG00000013749	ran	71	32.903
ENSTRUG00000025076	si:dkey-16l2.16	93	86.325	ENSTRUG00000020633	rab35b	86	78.613
ENSTRUG00000025076	si:dkey-16l2.16	89	30.526	ENSTRUG00000022489	rasd4	90	30.526
ENSTRUG00000025076	si:dkey-16l2.16	71	31.522	ENSTRUG00000005435	arl2	54	31.522
ENSTRUG00000025076	si:dkey-16l2.16	91	66.379	ENSTRUG00000004287	rab1ba	81	59.877
ENSTRUG00000025076	si:dkey-16l2.16	88	35.135	ENSTRUG00000020012	rhebl1	83	35.669
ENSTRUG00000025076	si:dkey-16l2.16	87	33.036	ENSTRUG00000024825	hrasb	89	34.503
ENSTRUG00000025076	si:dkey-16l2.16	81	46.078	ENSTRUG00000024368	rab5aa	78	41.667
ENSTRUG00000025076	si:dkey-16l2.16	78	42.857	ENSTRUG00000020093	-	83	35.465
ENSTRUG00000025076	si:dkey-16l2.16	91	47.826	ENSTRUG00000022029	rab11bb	80	43.678
ENSTRUG00000025076	si:dkey-16l2.16	78	39.796	ENSTRUG00000015697	rab23	78	35.625
ENSTRUG00000025076	si:dkey-16l2.16	79	41.414	ENSTRUG00000008698	rab9a	79	37.107
ENSTRUG00000025076	si:dkey-16l2.16	78	42.857	ENSTRUG00000010082	RAB7A	83	35.465
ENSTRUG00000025076	si:dkey-16l2.16	88	39.640	ENSTRUG00000010393	-	64	35.758
ENSTRUG00000025076	si:dkey-16l2.16	80	45.545	ENSTRUG00000018380	rab22a	83	39.130
ENSTRUG00000025076	si:dkey-16l2.16	87	46.364	ENSTRUG00000024455	rab12	67	42.331
ENSTRUG00000025076	si:dkey-16l2.16	73	30.000	ENSTRUG00000012988	rasl10a	82	31.176
ENSTRUG00000025076	si:dkey-16l2.16	90	48.246	ENSTRUG00000003363	rab2a	83	46.154
ENSTRUG00000025076	si:dkey-16l2.16	85	33.636	ENSTRUG00000017384	rras2	54	33.636
ENSTRUG00000025076	si:dkey-16l2.16	88	49.123	ENSTRUG00000020335	rab33a	66	46.243
ENSTRUG00000025076	si:dkey-16l2.16	78	36.686	ENSTRUG00000004902	rheb	88	36.686
ENSTRUG00000025076	si:dkey-16l2.16	87	56.250	ENSTRUG00000004984	rab18a	80	46.341
ENSTRUG00000025076	si:dkey-16l2.16	79	61.616	ENSTRUG00000004283	rab18b	80	48.171
ENSTRUG00000025076	si:dkey-16l2.16	99	40.097	ENSTRUG00000014595	-	76	44.375
ENSTRUG00000025076	si:dkey-16l2.16	92	48.276	ENSTRUG00000007556	rab11al	90	47.101
ENSTRUG00000025076	si:dkey-16l2.16	88	50.000	ENSTRUG00000007036	rab33ba	75	44.199
ENSTRUG00000025076	si:dkey-16l2.16	86	31.481	ENSTRUG00000022814	arl5c	56	31.481
ENSTRUG00000025076	si:dkey-16l2.16	92	40.000	ENSTRUG00000009903	zgc:101559	77	42.778
ENSTRUG00000025076	si:dkey-16l2.16	86	49.074	ENSTRUG00000007504	rab25b	82	42.529
ENSTRUG00000025076	si:dkey-16l2.16	75	38.298	ENSTRUG00000005805	mras	79	32.544
ENSTRUG00000025076	si:dkey-16l2.16	77	56.122	ENSTRUG00000025018	rab39bb	77	46.951
ENSTRUG00000025076	si:dkey-16l2.16	93	54.237	ENSTRUG00000014783	RAB15	82	47.126
ENSTRUG00000025076	si:dkey-16l2.16	91	47.826	ENSTRUG00000021619	-	81	43.678
ENSTRUG00000025076	si:dkey-16l2.16	91	47.826	ENSTRUG00000021614	-	80	43.678
ENSTRUG00000025076	si:dkey-16l2.16	96	36.816	ENSTRUG00000015590	rab5c	76	39.881
ENSTRUG00000025076	si:dkey-16l2.16	78	43.878	ENSTRUG00000009223	rab41	73	39.610
ENSTRUG00000025076	si:dkey-16l2.16	93	53.390	ENSTRUG00000024177	rab13	88	48.864
ENSTRUG00000025076	si:dkey-16l2.16	78	30.682	ENSTRUG00000008651	rasl11a	69	31.148
ENSTRUG00000025076	si:dkey-16l2.16	91	67.241	ENSTRUG00000024994	RAB1A	80	60.494
ENSTRUG00000025076	si:dkey-16l2.16	76	32.110	ENSTRUG00000009319	arfrp1	52	32.110
ENSTRUG00000025076	si:dkey-16l2.16	83	39.423	ENSTRUG00000013963	RAB9A	83	36.905
ENSTRUG00000025076	si:dkey-16l2.16	93	51.695	ENSTRUG00000017824	rab15	82	45.977
ENSTRUG00000025076	si:dkey-16l2.16	78	30.000	ENSTRUG00000024375	-	50	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025076	si:dkey-16l2.16	100	95.215	ENSAPOG00000008263	si:dkey-16l2.16	100	95.215	Acanthochromis_polyacanthus
ENSTRUG00000025076	si:dkey-16l2.16	100	95.694	ENSAOCG00000016825	si:dkey-16l2.16	100	95.694	Amphiprion_ocellaris
ENSTRUG00000025076	si:dkey-16l2.16	100	95.694	ENSAPEG00000006500	si:dkey-16l2.16	100	95.694	Amphiprion_percula
ENSTRUG00000025076	si:dkey-16l2.16	100	95.215	ENSATEG00000019238	si:dkey-16l2.16	100	95.215	Anabas_testudineus
ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	ENSACLG00000018721	si:dkey-16l2.16	100	93.780	Astatotilapia_calliptera
ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	ENSAMXG00000038243	si:dkey-16l2.16	100	93.780	Astyanax_mexicanus
ENSTRUG00000025076	si:dkey-16l2.16	94	97.458	ENSCSEG00000009988	si:dkey-16l2.16	90	97.458	Cynoglossus_semilaevis
ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	ENSCVAG00000003537	si:dkey-16l2.16	100	93.780	Cyprinodon_variegatus
ENSTRUG00000025076	si:dkey-16l2.16	100	91.388	ENSDARG00000037967	si:dkey-16l2.16	99	96.610	Danio_rerio
ENSTRUG00000025076	si:dkey-16l2.16	94	95.763	ENSELUG00000023247	si:dkey-16l2.16	99	85.096	Esox_lucius
ENSTRUG00000025076	si:dkey-16l2.16	94	95.763	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSTRUG00000025076	si:dkey-16l2.16	94	95.798	ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	Gadus_morhua
ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	ENSGAFG00000005388	si:dkey-16l2.16	100	88.038	Gambusia_affinis
ENSTRUG00000025076	si:dkey-16l2.16	100	93.301	ENSGACG00000014915	si:dkey-16l2.16	98	93.301	Gasterosteus_aculeatus
ENSTRUG00000025076	si:dkey-16l2.16	100	94.258	ENSHBUG00000019261	si:dkey-16l2.16	100	94.258	Haplochromis_burtoni
ENSTRUG00000025076	si:dkey-16l2.16	100	93.301	ENSHCOG00000006538	si:dkey-16l2.16	100	93.301	Hippocampus_comes
ENSTRUG00000025076	si:dkey-16l2.16	100	91.866	ENSKMAG00000003494	si:dkey-16l2.16	100	91.866	Kryptolebias_marmoratus
ENSTRUG00000025076	si:dkey-16l2.16	100	95.215	ENSLBEG00000007681	si:dkey-16l2.16	100	95.215	Labrus_bergylta
ENSTRUG00000025076	si:dkey-16l2.16	100	94.737	ENSMAMG00000019230	si:dkey-16l2.16	100	94.737	Mastacembelus_armatus
ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	ENSMZEG00005002081	si:dkey-16l2.16	100	93.780	Maylandia_zebra
ENSTRUG00000025076	si:dkey-16l2.16	99	95.146	ENSMMOG00000020140	si:dkey-16l2.16	97	95.146	Mola_mola
ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	ENSMALG00000014727	si:dkey-16l2.16	99	93.780	Monopterus_albus
ENSTRUG00000025076	si:dkey-16l2.16	100	94.737	ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	Neolamprologus_brichardi
ENSTRUG00000025076	si:dkey-16l2.16	100	93.780	ENSONIG00000009443	si:dkey-16l2.16	100	93.780	Oreochromis_niloticus
ENSTRUG00000025076	si:dkey-16l2.16	94	95.798	ENSORLG00000001098	si:dkey-16l2.16	99	88.995	Oryzias_latipes
ENSTRUG00000025076	si:dkey-16l2.16	94	95.798	ENSORLG00020000867	si:dkey-16l2.16	99	88.995	Oryzias_latipes_hni
ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	ENSOMEG00000015474	si:dkey-16l2.16	100	87.560	Oryzias_melastigma
ENSTRUG00000025076	si:dkey-16l2.16	100	92.344	ENSPKIG00000005686	-	100	92.344	Paramormyrops_kingsleyae
ENSTRUG00000025076	si:dkey-16l2.16	94	94.118	ENSPKIG00000018888	si:dkey-16l2.16	94	83.163	Paramormyrops_kingsleyae
ENSTRUG00000025076	si:dkey-16l2.16	100	94.737	ENSPMGG00000000751	si:dkey-16l2.16	100	94.737	Periophthalmus_magnuspinnatus
ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	ENSPFOG00000004746	si:dkey-16l2.16	100	88.517	Poecilia_formosa
ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	ENSPLAG00000021043	si:dkey-16l2.16	100	88.038	Poecilia_latipinna
ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	ENSPMEG00000007165	si:dkey-16l2.16	100	88.517	Poecilia_mexicana
ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	ENSPREG00000005323	si:dkey-16l2.16	100	88.038	Poecilia_reticulata
ENSTRUG00000025076	si:dkey-16l2.16	100	94.258	ENSPNYG00000009490	si:dkey-16l2.16	100	94.258	Pundamilia_nyererei
ENSTRUG00000025076	si:dkey-16l2.16	100	92.823	ENSPNAG00000018986	si:dkey-16l2.16	100	92.823	Pygocentrus_nattereri
ENSTRUG00000025076	si:dkey-16l2.16	100	91.866	ENSSFOG00015021448	-	100	91.866	Scleropages_formosus
ENSTRUG00000025076	si:dkey-16l2.16	94	88.235	ENSSFOG00015006414	-	85	83.616	Scleropages_formosus
ENSTRUG00000025076	si:dkey-16l2.16	100	90.431	ENSSMAG00000011769	si:dkey-16l2.16	94	90.431	Scophthalmus_maximus
ENSTRUG00000025076	si:dkey-16l2.16	100	96.172	ENSSDUG00000005719	si:dkey-16l2.16	100	96.172	Seriola_dumerili
ENSTRUG00000025076	si:dkey-16l2.16	100	96.172	ENSSLDG00000003631	si:dkey-16l2.16	100	96.172	Seriola_lalandi_dorsalis
ENSTRUG00000025076	si:dkey-16l2.16	100	95.694	ENSSPAG00000006302	si:dkey-16l2.16	100	95.694	Stegastes_partitus
ENSTRUG00000025076	si:dkey-16l2.16	100	96.651	ENSTNIG00000011300	si:dkey-16l2.16	100	96.651	Tetraodon_nigroviridis
ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	Xiphophorus_maculatus