EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000025082 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 7026 bases
Position: chr8:12143621-12150646
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000050853	zf-C2H2	PF00096.26	7.5e-16	1	1
ENSTRUP00000050853	zf-met	PF12874.7	5.8e-11	1	2
ENSTRUP00000050853	zf-met	PF12874.7	5.8e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055792	-	3084	-	ENSTRUP00000050853	1027 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000025082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025082	si:ch211-212k18.5	95	72.990	ENSAPOG00000013387	si:ch211-212k18.5	93	74.705	Acanthochromis_polyacanthus
ENSTRUG00000025082	si:ch211-212k18.5	86	73.899	ENSACIG00000019922	si:ch211-212k18.5	90	77.677	Amphilophus_citrinellus
ENSTRUG00000025082	si:ch211-212k18.5	95	74.684	ENSAOCG00000010737	si:ch211-212k18.5	88	78.169	Amphiprion_ocellaris
ENSTRUG00000025082	si:ch211-212k18.5	95	74.914	ENSAPEG00000006751	si:ch211-212k18.5	88	78.404	Amphiprion_percula
ENSTRUG00000025082	si:ch211-212k18.5	79	76.636	ENSATEG00000001254	si:ch211-212k18.5	93	77.713	Anabas_testudineus
ENSTRUG00000025082	si:ch211-212k18.5	97	73.977	ENSACLG00000009709	si:ch211-212k18.5	90	77.086	Astatotilapia_calliptera
ENSTRUG00000025082	si:ch211-212k18.5	92	66.069	ENSAMXG00000010979	si:ch211-212k18.5	91	62.256	Astyanax_mexicanus
ENSTRUG00000025082	si:ch211-212k18.5	61	48.584	ENSAMXG00000020956	sall2	57	48.629	Astyanax_mexicanus
ENSTRUG00000025082	si:ch211-212k18.5	96	74.002	ENSCSEG00000004426	si:ch211-212k18.5	89	73.007	Cynoglossus_semilaevis
ENSTRUG00000025082	si:ch211-212k18.5	98	68.592	ENSCVAG00000007475	si:ch211-212k18.5	92	71.702	Cyprinodon_variegatus
ENSTRUG00000025082	si:ch211-212k18.5	62	48.948	ENSDARG00000075116	sall2	62	46.953	Danio_rerio
ENSTRUG00000025082	si:ch211-212k18.5	78	65.707	ENSDARG00000103316	si:ch211-212k18.5	70	66.264	Danio_rerio
ENSTRUG00000025082	si:ch211-212k18.5	92	65.311	ENSELUG00000024534	si:ch211-212k18.5	73	65.728	Esox_lucius
ENSTRUG00000025082	si:ch211-212k18.5	98	75.376	ENSFHEG00000017264	si:ch211-212k18.5	86	75.576	Fundulus_heteroclitus
ENSTRUG00000025082	si:ch211-212k18.5	60	46.335	ENSGAFG00000015194	sall2	58	45.406	Gambusia_affinis
ENSTRUG00000025082	si:ch211-212k18.5	98	70.175	ENSGAFG00000003746	si:ch211-212k18.5	94	70.807	Gambusia_affinis
ENSTRUG00000025082	si:ch211-212k18.5	95	74.091	ENSHBUG00000019672	si:ch211-212k18.5	94	76.705	Haplochromis_burtoni
ENSTRUG00000025082	si:ch211-212k18.5	81	69.905	ENSHCOG00000002842	si:ch211-212k18.5	74	67.373	Hippocampus_comes
ENSTRUG00000025082	si:ch211-212k18.5	83	60.281	ENSIPUG00000002559	sall2	75	61.351	Ictalurus_punctatus
ENSTRUG00000025082	si:ch211-212k18.5	95	69.468	ENSKMAG00000019657	si:ch211-212k18.5	91	71.353	Kryptolebias_marmoratus
ENSTRUG00000025082	si:ch211-212k18.5	95	78.114	ENSLBEG00000020887	si:ch211-212k18.5	88	78.231	Labrus_bergylta
ENSTRUG00000025082	si:ch211-212k18.5	79	78.830	ENSMAMG00000015887	si:ch211-212k18.5	99	78.947	Mastacembelus_armatus
ENSTRUG00000025082	si:ch211-212k18.5	95	73.977	ENSMZEG00005021214	si:ch211-212k18.5	90	77.086	Maylandia_zebra
ENSTRUG00000025082	si:ch211-212k18.5	95	75.197	ENSMMOG00000012726	si:ch211-212k18.5	93	75.197	Mola_mola
ENSTRUG00000025082	si:ch211-212k18.5	93	77.203	ENSMALG00000000979	si:ch211-212k18.5	91	78.143	Monopterus_albus
ENSTRUG00000025082	si:ch211-212k18.5	95	71.886	ENSNBRG00000023948	si:ch211-212k18.5	91	75.558	Neolamprologus_brichardi
ENSTRUG00000025082	si:ch211-212k18.5	78	44.989	ENSNBRG00000017645	sall2	62	48.063	Neolamprologus_brichardi
ENSTRUG00000025082	si:ch211-212k18.5	80	72.633	ENSORLG00000030429	si:ch211-212k18.5	73	72.883	Oryzias_latipes
ENSTRUG00000025082	si:ch211-212k18.5	99	72.286	ENSORLG00020008145	si:ch211-212k18.5	73	72.883	Oryzias_latipes_hni
ENSTRUG00000025082	si:ch211-212k18.5	98	72.402	ENSORLG00015004982	si:ch211-212k18.5	73	72.654	Oryzias_latipes_hsok
ENSTRUG00000025082	si:ch211-212k18.5	85	69.338	ENSOMEG00000013949	si:ch211-212k18.5	73	72.082	Oryzias_melastigma
ENSTRUG00000025082	si:ch211-212k18.5	80	49.251	ENSPKIG00000009207	sall2	67	48.969	Paramormyrops_kingsleyae
ENSTRUG00000025082	si:ch211-212k18.5	95	63.286	ENSPMGG00000018714	si:ch211-212k18.5	99	71.904	Periophthalmus_magnuspinnatus
ENSTRUG00000025082	si:ch211-212k18.5	98	70.600	ENSPFOG00000023705	si:ch211-212k18.5	100	69.919	Poecilia_formosa
ENSTRUG00000025082	si:ch211-212k18.5	98	69.130	ENSPLAG00000002577	si:ch211-212k18.5	95	70.051	Poecilia_latipinna
ENSTRUG00000025082	si:ch211-212k18.5	98	68.020	ENSPMEG00000016395	si:ch211-212k18.5	100	69.481	Poecilia_mexicana
ENSTRUG00000025082	si:ch211-212k18.5	98	74.429	ENSPREG00000005292	si:ch211-212k18.5	87	75.913	Poecilia_reticulata
ENSTRUG00000025082	si:ch211-212k18.5	97	72.445	ENSPNYG00000021576	si:ch211-212k18.5	89	77.203	Pundamilia_nyererei
ENSTRUG00000025082	si:ch211-212k18.5	96	64.202	ENSPNAG00000006123	si:ch211-212k18.5	86	64.437	Pygocentrus_nattereri
ENSTRUG00000025082	si:ch211-212k18.5	62	47.196	ENSPNAG00000021463	sall2	58	47.413	Pygocentrus_nattereri
ENSTRUG00000025082	si:ch211-212k18.5	95	73.077	ENSSMAG00000006241	si:ch211-212k18.5	92	73.956	Scophthalmus_maximus
ENSTRUG00000025082	si:ch211-212k18.5	95	76.993	ENSSDUG00000006164	si:ch211-212k18.5	87	78.813	Seriola_dumerili
ENSTRUG00000025082	si:ch211-212k18.5	95	79.271	ENSSLDG00000003393	si:ch211-212k18.5	88	78.929	Seriola_lalandi_dorsalis
ENSTRUG00000025082	si:ch211-212k18.5	97	77.332	ENSSPAG00000013435	si:ch211-212k18.5	93	79.250	Stegastes_partitus
ENSTRUG00000025082	si:ch211-212k18.5	98	66.835	ENSXCOG00000000762	si:ch211-212k18.5	94	67.475	Xiphophorus_couchianus
ENSTRUG00000025082	si:ch211-212k18.5	98	66.931	ENSXMAG00000001461	si:ch211-212k18.5	94	68.119	Xiphophorus_maculatus