EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000025171 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 4-like
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 3217 bases
Position: chr19:1447291-1450507
Accession: 101070543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053162	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000051309	-	2291	XM_003973052	ENSTRUP00000053162	162 (aa)	XP_003973101	-

Gene Model

Click here to download ENSTRUG00000025171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000025171	-	87	66.667	ENSTRUG00000019870	-	78	66.667
ENSTRUG00000025171	-	86	42.857	ENSTRUG00000008027	arl4aa	74	42.857
ENSTRUG00000025171	-	80	46.512	ENSTRUG00000005435	arl2	70	46.512
ENSTRUG00000025171	-	93	47.205	ENSTRUG00000003183	-	82	47.205
ENSTRUG00000025171	-	88	59.441	ENSTRUG00000024749	-	99	59.441
ENSTRUG00000025171	-	99	37.888	ENSTRUG00000022814	arl5c	89	37.888
ENSTRUG00000025171	-	99	53.416	ENSTRUG00000020509	-	81	53.416
ENSTRUG00000025171	-	98	42.138	ENSTRUG00000018107	arl3	87	42.138
ENSTRUG00000025171	-	80	33.083	ENSTRUG00000023169	arl8ba	70	33.083
ENSTRUG00000025171	-	86	32.374	ENSTRUG00000023908	sar1b	70	32.374
ENSTRUG00000025171	-	90	66.897	ENSTRUG00000007465	arf3	80	66.897
ENSTRUG00000025171	-	80	34.586	ENSTRUG00000011496	arl8bb	70	34.586
ENSTRUG00000025171	-	98	42.500	ENSTRUG00000020453	arl8	89	42.500
ENSTRUG00000025171	-	90	54.483	ENSTRUG00000006254	arl1	80	54.483
ENSTRUG00000025171	-	93	42.105	ENSTRUG00000011561	arl11	86	42.105
ENSTRUG00000025171	-	90	66.897	ENSTRUG00000011190	arf3	80	66.897
ENSTRUG00000025171	-	98	64.151	ENSTRUG00000025462	-	89	64.151
ENSTRUG00000025171	-	98	39.623	ENSTRUG00000018668	-	80	39.623
ENSTRUG00000025171	-	80	33.835	ENSTRUG00000013912	arl8a	70	33.835
ENSTRUG00000025171	-	80	34.884	ENSTRUG00000013035	-	50	34.884
ENSTRUG00000025171	-	83	48.148	ENSTRUG00000004035	arl3l2	72	48.148
ENSTRUG00000025171	-	86	36.424	ENSTRUG00000009319	arfrp1	72	36.424
ENSTRUG00000025171	-	98	38.365	ENSTRUG00000014614	arl5a	88	38.365
ENSTRUG00000025171	-	85	50.694	ENSTRUG00000003085	arl4cb	74	50.694
ENSTRUG00000025171	-	95	40.237	ENSTRUG00000024375	-	84	40.237
ENSTRUG00000025171	-	79	42.424	ENSTRUG00000003716	-	56	42.424
ENSTRUG00000025171	-	98	63.750	ENSTRUG00000023041	-	88	63.750
ENSTRUG00000025171	-	88	39.456	ENSTRUG00000017239	ARL6	78	39.456
ENSTRUG00000025171	-	98	63.750	ENSTRUG00000014380	-	88	63.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025171	-	98	76.101	ENSAPEG00000002838	-	89	76.101	Amphiprion_percula
ENSTRUG00000025171	-	80	81.395	ENSATEG00000003808	-	75	81.395	Anabas_testudineus
ENSTRUG00000025171	-	98	77.358	ENSATEG00000003847	-	89	77.358	Anabas_testudineus
ENSTRUG00000025171	-	98	75.472	ENSACLG00000009822	-	85	75.472	Astatotilapia_calliptera
ENSTRUG00000025171	-	90	71.233	ENSCVAG00000013902	-	89	71.233	Cyprinodon_variegatus
ENSTRUG00000025171	-	85	75.912	ENSFHEG00000019659	-	77	75.912	Fundulus_heteroclitus
ENSTRUG00000025171	-	67	85.185	ENSGAFG00000002801	-	96	85.185	Gambusia_affinis
ENSTRUG00000025171	-	93	78.947	ENSGACG00000003831	-	84	78.947	Gasterosteus_aculeatus
ENSTRUG00000025171	-	98	72.956	ENSHBUG00000001250	-	89	72.956	Haplochromis_burtoni
ENSTRUG00000025171	-	98	77.987	ENSLBEG00000027205	-	90	77.987	Labrus_bergylta
ENSTRUG00000025171	-	98	76.101	ENSMAMG00000013955	-	89	76.101	Mastacembelus_armatus
ENSTRUG00000025171	-	98	75.472	ENSMZEG00005016274	-	89	75.472	Maylandia_zebra
ENSTRUG00000025171	-	98	75.472	ENSMZEG00005016277	-	89	75.472	Maylandia_zebra
ENSTRUG00000025171	-	98	72.956	ENSMMOG00000013651	-	88	72.956	Mola_mola
ENSTRUG00000025171	-	98	74.214	ENSONIG00000004340	-	89	74.214	Oreochromis_niloticus
ENSTRUG00000025171	-	98	77.987	ENSPLAG00000015887	-	89	77.987	Poecilia_latipinna
ENSTRUG00000025171	-	98	77.987	ENSPMEG00000007064	-	89	77.987	Poecilia_mexicana
ENSTRUG00000025171	-	98	77.987	ENSPREG00000000912	-	93	77.987	Poecilia_reticulata
ENSTRUG00000025171	-	98	63.158	ENSSMAG00000002487	-	79	76.692	Scophthalmus_maximus
ENSTRUG00000025171	-	98	76.101	ENSSDUG00000020599	-	89	76.101	Seriola_dumerili
ENSTRUG00000025171	-	98	76.730	ENSSLDG00000020097	-	89	76.730	Seriola_lalandi_dorsalis
ENSTRUG00000025171	-	98	76.730	ENSSPAG00000017484	-	89	76.730	Stegastes_partitus
ENSTRUG00000025171	-	92	84.000	ENSTNIG00000018302	-	72	80.606	Tetraodon_nigroviridis
ENSTRUG00000025171	-	68	90.000	ENSTNIG00000005043	-	97	90.000	Tetraodon_nigroviridis
ENSTRUG00000025171	-	93	86.093	ENSTNIG00000000796	-	72	81.707	Tetraodon_nigroviridis
ENSTRUG00000025171	-	92	87.919	ENSTNIG00000001632	-	72	84.146	Tetraodon_nigroviridis
ENSTRUG00000025171	-	98	76.730	ENSXMAG00000029601	-	89	76.730	Xiphophorus_maculatus