EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000025251 (Gene tree)
Gene ID: -
Gene Symbol: tnpo3 (1 of many)
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 2313 bases
Position: chrHE592552.1:3997-6309
Accession: ZDB-GENE-040426-708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000049479	Xpo1	PF08389.12	1.6e-16	1	1
ENSTRUP00000049479	IBN_N	PF03810.19	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054538	-	846	-	ENSTRUP00000049479	281 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000025251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025251	tnpo3	96	50.890	ENSCSAVG00000008623	-	94	49.638	Ciona_savignyi
ENSTRUG00000025251	tnpo3	100	84.880	ENSCSEG00000005952	tnpo3	69	82.237	Cynoglossus_semilaevis
ENSTRUG00000025251	tnpo3	100	77.397	ENSECAG00000012815	TNPO3	59	77.397	Equus_caballus
ENSTRUG00000025251	tnpo3	100	76.109	ENSGALG00000039420	TNPO3	54	76.792	Gallus_gallus
ENSTRUG00000025251	tnpo3	100	84.983	ENSGAFG00000017639	tnpo3	100	85.911	Gambusia_affinis
ENSTRUG00000025251	tnpo3	100	82.253	ENSHCOG00000007221	tnpo3	63	80.952	Hippocampus_comes
ENSTRUG00000025251	tnpo3	77	71.806	ENSPSIG00000006156	-	57	73.333	Pelodiscus_sinensis
ENSTRUG00000025251	tnpo3	100	87.031	ENSPMGG00000009763	tnpo3	53	87.973	Periophthalmus_magnuspinnatus
ENSTRUG00000025251	tnpo3	100	85.666	ENSPMEG00000022731	tnpo3	66	86.598	Poecilia_mexicana
ENSTRUG00000025251	tnpo3	100	84.983	ENSPREG00000019847	tnpo3	100	85.911	Poecilia_reticulata
ENSTRUG00000025251	tnpo3	100	77.397	ENSSSCG00000016572	TNPO3	65	77.397	Sus_scrofa
ENSTRUG00000025251	tnpo3	65	70.312	ENSTGUG00000016200	-	99	71.354	Taeniopygia_guttata
ENSTRUG00000025251	tnpo3	100	84.983	ENSXCOG00000011552	tnpo3	100	85.911	Xiphophorus_couchianus