EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000025441 (Gene tree)
Gene ID: 101071918
Gene Symbol: zgc:152968
Alias: -
Full Name: putative exonuclease GOR-like protein
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 8009 bases
Position: chr21:10724398-10732406
Accession: 101071918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000048660	RNase_T	PF00929.24	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000052900	-	5248	XM_011615990	ENSTRUP00000048660	1121 (aa)	XP_011614292	UPI0005D25C25

Gene Model

Click here to download ENSTRUG00000025441's gene model file

Pathways

Pathway ID	Pathway Name	Source
tru03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025441	zgc:152968	68	73.479	ENSAPOG00000005095	zgc:152968	92	73.479	Acanthochromis_polyacanthus
ENSTRUG00000025441	zgc:152968	81	74.580	ENSACIG00000002527	zgc:152968	99	74.580	Amphilophus_citrinellus
ENSTRUG00000025441	zgc:152968	100	53.968	ENSAOCG00000018049	-	98	69.903	Amphiprion_ocellaris
ENSTRUG00000025441	zgc:152968	96	51.179	ENSAPEG00000012559	zgc:152968	99	51.179	Amphiprion_percula
ENSTRUG00000025441	zgc:152968	100	54.828	ENSACLG00000020524	-	98	72.684	Astatotilapia_calliptera
ENSTRUG00000025441	zgc:152968	82	73.515	ENSCVAG00000015400	zgc:152968	100	73.515	Cyprinodon_variegatus
ENSTRUG00000025441	zgc:152968	83	49.930	ENSDARG00000037002	zgc:152968	73	49.659	Danio_rerio
ENSTRUG00000025441	zgc:152968	80	53.005	ENSELUG00000014272	zgc:152968	83	49.274	Esox_lucius
ENSTRUG00000025441	zgc:152968	60	66.903	ENSFHEG00000003641	-	69	67.150	Fundulus_heteroclitus
ENSTRUG00000025441	zgc:152968	92	80.734	ENSGAFG00000016810	-	98	80.734	Gambusia_affinis
ENSTRUG00000025441	zgc:152968	97	53.488	ENSHBUG00000007524	-	98	53.448	Haplochromis_burtoni
ENSTRUG00000025441	zgc:152968	59	69.444	ENSIPUG00000004633	zgc:152968	73	69.444	Ictalurus_punctatus
ENSTRUG00000025441	zgc:152968	84	69.143	ENSLBEG00000026485	zgc:152968	99	68.952	Labrus_bergylta
ENSTRUG00000025441	zgc:152968	93	64.965	ENSMAMG00000005920	-	100	48.434	Mastacembelus_armatus
ENSTRUG00000025441	zgc:152968	100	54.744	ENSMZEG00005013783	-	98	73.902	Maylandia_zebra
ENSTRUG00000025441	zgc:152968	88	77.878	ENSMMOG00000018072	zgc:152968	99	81.995	Mola_mola
ENSTRUG00000025441	zgc:152968	84	67.625	ENSMALG00000003536	-	98	68.774	Monopterus_albus
ENSTRUG00000025441	zgc:152968	95	68.089	ENSONIG00000016897	-	100	67.748	Oreochromis_niloticus
ENSTRUG00000025441	zgc:152968	69	70.416	ENSOMEG00000008840	-	83	70.416	Oryzias_melastigma
ENSTRUG00000025441	zgc:152968	91	72.483	ENSPFOG00000006104	-	95	76.399	Poecilia_formosa
ENSTRUG00000025441	zgc:152968	83	72.365	ENSPLAG00000005034	-	98	73.159	Poecilia_latipinna
ENSTRUG00000025441	zgc:152968	100	51.727	ENSPMEG00000018012	-	100	52.159	Poecilia_mexicana
ENSTRUG00000025441	zgc:152968	84	67.780	ENSPREG00000007481	-	98	68.949	Poecilia_reticulata
ENSTRUG00000025441	zgc:152968	60	49.926	ENSSFOG00015023869	zgc:152968	63	63.260	Scleropages_formosus
ENSTRUG00000025441	zgc:152968	100	54.568	ENSSMAG00000008149	-	100	55.095	Scophthalmus_maximus
ENSTRUG00000025441	zgc:152968	88	78.049	ENSSDUG00000022323	-	98	78.049	Seriola_dumerili
ENSTRUG00000025441	zgc:152968	88	78.537	ENSSLDG00000018799	zgc:152968	97	78.537	Seriola_lalandi_dorsalis
ENSTRUG00000025441	zgc:152968	86	72.677	ENSSPAG00000007632	-	97	72.491	Stegastes_partitus
ENSTRUG00000025441	zgc:152968	100	50.514	ENSXMAG00000026483	-	100	50.856	Xiphophorus_maculatus