EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTRUG00000025641 (Gene tree)
Gene ID: 105416474
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 7880 bases
Position: chr5:8806391-8814270
Accession: 105416474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000022937	RRM_1	PF00076.22	2e-29	1	2
ENSTRUP00000022937	RRM_1	PF00076.22	2e-29	2	2
ENSTRUP00000022936	RRM_1	PF00076.22	2e-29	1	2
ENSTRUP00000022936	RRM_1	PF00076.22	2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000023033	-	4114	-	ENSTRUP00000022937	727 (aa)	-	H2TE45
ENSTRUT00000023032	-	4001	XM_011604097	ENSTRUP00000022936	725 (aa)	XP_011602399	H2TE44

Gene Model

Click here to download ENSTRUG00000025641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTRUG00000025641	raver1	58	54.762	ENSTRUG00000018541	raver2	87	54.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025641	raver1	91	50.685	ENSG00000161847	RAVER1	96	50.964	Homo_sapiens
ENSTRUG00000025641	raver1	98	79.972	ENSAPOG00000017267	raver1	90	80.807	Acanthochromis_polyacanthus
ENSTRUG00000025641	raver1	93	48.322	ENSAMEG00000011738	RAVER1	96	48.448	Ailuropoda_melanoleuca
ENSTRUG00000025641	raver1	98	80.641	ENSAOCG00000005128	raver1	95	81.476	Amphiprion_ocellaris
ENSTRUG00000025641	raver1	98	80.636	ENSAPEG00000010854	raver1	98	81.466	Amphiprion_percula
ENSTRUG00000025641	raver1	98	80.939	ENSATEG00000021004	raver1	98	80.939	Anabas_testudineus
ENSTRUG00000025641	raver1	78	49.421	ENSACAG00000008386	-	90	49.191	Anolis_carolinensis
ENSTRUG00000025641	raver1	80	58.939	ENSANAG00000028226	RAVER1	97	50.401	Aotus_nancymaae
ENSTRUG00000025641	raver1	100	78.261	ENSACLG00000018492	raver1	94	79.172	Astatotilapia_calliptera
ENSTRUG00000025641	raver1	91	65.147	ENSAMXG00000005132	raver1	93	66.129	Astyanax_mexicanus
ENSTRUG00000025641	raver1	58	85.714	ENSBTAG00000015721	RAVER1	98	52.266	Bos_taurus
ENSTRUG00000025641	raver1	67	59.566	ENSCJAG00000005671	RAVER1	96	50.946	Callithrix_jacchus
ENSTRUG00000025641	raver1	67	57.647	ENSCAFG00000017861	RAVER1	97	51.040	Canis_familiaris
ENSTRUG00000025641	raver1	67	57.647	ENSCAFG00020024449	RAVER1	99	51.040	Canis_lupus_dingo
ENSTRUG00000025641	raver1	78	59.574	ENSCHIG00000006718	RAVER1	96	51.393	Capra_hircus
ENSTRUG00000025641	raver1	62	66.205	ENSTSYG00000027107	RAVER1	100	51.459	Carlito_syrichta
ENSTRUG00000025641	raver1	73	57.871	ENSCAPG00000002269	RAVER1	93	49.493	Cavia_aperea
ENSTRUG00000025641	raver1	64	58.436	ENSCPOG00000001008	RAVER1	98	50.134	Cavia_porcellus
ENSTRUG00000025641	raver1	67	59.763	ENSCCAG00000031723	RAVER1	97	51.210	Cebus_capucinus
ENSTRUG00000025641	raver1	78	59.553	ENSCATG00000043863	RAVER1	94	51.172	Cercocebus_atys
ENSTRUG00000025641	raver1	91	49.931	ENSCLAG00000009336	RAVER1	99	48.701	Chinchilla_lanigera
ENSTRUG00000025641	raver1	67	59.216	ENSCSAG00000007317	RAVER1	82	50.740	Chlorocebus_sabaeus
ENSTRUG00000025641	raver1	93	50.000	ENSCPBG00000005349	-	98	50.000	Chrysemys_picta_bellii
ENSTRUG00000025641	raver1	65	59.426	ENSCANG00000008337	RAVER1	94	51.040	Colobus_angolensis_palliatus
ENSTRUG00000025641	raver1	78	59.000	ENSCGRG00001013260	-	97	50.204	Cricetulus_griseus_chok1gshd
ENSTRUG00000025641	raver1	78	59.000	ENSCGRG00000015138	-	97	50.204	Cricetulus_griseus_crigri
ENSTRUG00000025641	raver1	98	72.828	ENSCSEG00000021092	raver1	98	72.828	Cynoglossus_semilaevis
ENSTRUG00000025641	raver1	100	73.613	ENSCVAG00000013971	raver1	98	73.967	Cyprinodon_variegatus
ENSTRUG00000025641	raver1	98	65.193	ENSDARG00000052617	raver1	98	65.655	Danio_rerio
ENSTRUG00000025641	raver1	58	60.061	ENSDNOG00000035742	-	73	58.000	Dasypus_novemcinctus
ENSTRUG00000025641	raver1	80	57.000	ENSDORG00000010106	-	98	47.473	Dipodomys_ordii
ENSTRUG00000025641	raver1	51	50.269	ENSETEG00000008201	-	70	49.741	Echinops_telfairi
ENSTRUG00000025641	raver1	50	39.454	ENSEBUG00000003030	RAVER1	53	39.250	Eptatretus_burgeri
ENSTRUG00000025641	raver1	55	64.838	ENSEASG00005010544	-	72	64.838	Equus_asinus_asinus
ENSTRUG00000025641	raver1	80	58.218	ENSECAG00000024966	RAVER1	96	51.351	Equus_caballus
ENSTRUG00000025641	raver1	98	69.945	ENSELUG00000023287	raver1	98	71.330	Esox_lucius
ENSTRUG00000025641	raver1	93	50.202	ENSFCAG00000009435	RAVER1	96	50.809	Felis_catus
ENSTRUG00000025641	raver1	91	49.036	ENSFDAG00000015113	RAVER1	96	49.521	Fukomys_damarensis
ENSTRUG00000025641	raver1	94	68.785	ENSGMOG00000003649	raver1	99	68.785	Gadus_morhua
ENSTRUG00000025641	raver1	64	40.966	ENSGALG00000050608	-	51	41.336	Gallus_gallus
ENSTRUG00000025641	raver1	100	74.220	ENSGAFG00000015944	raver1	98	74.586	Gambusia_affinis
ENSTRUG00000025641	raver1	94	71.114	ENSGACG00000013818	raver1	99	71.939	Gasterosteus_aculeatus
ENSTRUG00000025641	raver1	81	66.756	ENSGAGG00000011748	-	98	65.796	Gopherus_agassizii
ENSTRUG00000025641	raver1	91	50.548	ENSGGOG00000006015	RAVER1	94	50.826	Gorilla_gorilla
ENSTRUG00000025641	raver1	99	78.112	ENSHBUG00000021210	raver1	98	74.828	Haplochromis_burtoni
ENSTRUG00000025641	raver1	91	49.241	ENSHGLG00000015460	RAVER1	96	49.728	Heterocephalus_glaber_female
ENSTRUG00000025641	raver1	91	49.241	ENSHGLG00100000812	RAVER1	96	49.728	Heterocephalus_glaber_male
ENSTRUG00000025641	raver1	100	72.169	ENSHCOG00000000449	raver1	96	73.306	Hippocampus_comes
ENSTRUG00000025641	raver1	97	65.734	ENSIPUG00000013153	raver1	97	66.434	Ictalurus_punctatus
ENSTRUG00000025641	raver1	78	58.537	ENSSTOG00000003241	RAVER1	98	50.336	Ictidomys_tridecemlineatus
ENSTRUG00000025641	raver1	94	49.867	ENSJJAG00000018219	-	99	50.598	Jaculus_jaculus
ENSTRUG00000025641	raver1	100	78.231	ENSKMAG00000017355	raver1	98	78.315	Kryptolebias_marmoratus
ENSTRUG00000025641	raver1	92	81.751	ENSLBEG00000008268	raver1	94	82.024	Labrus_bergylta
ENSTRUG00000025641	raver1	60	65.642	ENSLACG00000005809	-	81	59.804	Latimeria_chalumnae
ENSTRUG00000025641	raver1	92	60.744	ENSLOCG00000007500	raver1	97	58.747	Lepisosteus_oculatus
ENSTRUG00000025641	raver1	72	85.714	ENSLAFG00000003664	-	99	50.268	Loxodonta_africana
ENSTRUG00000025641	raver1	80	59.216	ENSMFAG00000037977	RAVER1	96	51.279	Macaca_fascicularis
ENSTRUG00000025641	raver1	80	59.216	ENSMMUG00000014897	RAVER1	96	51.144	Macaca_mulatta
ENSTRUG00000025641	raver1	80	59.216	ENSMNEG00000028390	RAVER1	96	51.144	Macaca_nemestrina
ENSTRUG00000025641	raver1	78	59.350	ENSMLEG00000041959	RAVER1	94	51.034	Mandrillus_leucophaeus
ENSTRUG00000025641	raver1	98	78.345	ENSMAMG00000012059	raver1	98	78.759	Mastacembelus_armatus
ENSTRUG00000025641	raver1	100	78.261	ENSMZEG00005019002	raver1	98	79.172	Maylandia_zebra
ENSTRUG00000025641	raver1	78	60.000	ENSMAUG00000017948	-	97	50.474	Mesocricetus_auratus
ENSTRUG00000025641	raver1	93	51.172	ENSMICG00000010326	RAVER1	98	52.254	Microcebus_murinus
ENSTRUG00000025641	raver1	78	59.000	ENSMOCG00000015553	-	98	50.203	Microtus_ochrogaster
ENSTRUG00000025641	raver1	98	82.158	ENSMMOG00000012093	raver1	98	82.158	Mola_mola
ENSTRUG00000025641	raver1	88	50.817	ENSMODG00000005584	-	85	51.114	Monodelphis_domestica
ENSTRUG00000025641	raver1	100	78.503	ENSMALG00000016569	raver1	99	78.591	Monopterus_albus
ENSTRUG00000025641	raver1	79	60.000	MGP_CAROLIEiJ_G0031860	-	98	50.201	Mus_caroli
ENSTRUG00000025641	raver1	78	59.000	ENSMUSG00000010205	Raver1	97	50.270	Mus_musculus
ENSTRUG00000025641	raver1	65	56.137	MGP_PahariEiJ_G0014726	-	97	50.067	Mus_pahari
ENSTRUG00000025641	raver1	78	59.000	MGP_SPRETEiJ_G0032984	-	97	50.135	Mus_spretus
ENSTRUG00000025641	raver1	77	59.259	ENSMPUG00000006712	RAVER1	78	58.696	Mustela_putorius_furo
ENSTRUG00000025641	raver1	66	57.171	ENSMLUG00000012328	RAVER1	97	52.174	Myotis_lucifugus
ENSTRUG00000025641	raver1	65	55.248	ENSNGAG00000001260	-	98	49.180	Nannospalax_galili
ENSTRUG00000025641	raver1	100	70.788	ENSNBRG00000010139	raver1	98	72.414	Neolamprologus_brichardi
ENSTRUG00000025641	raver1	91	51.253	ENSNLEG00000012181	RAVER1	94	51.385	Nomascus_leucogenys
ENSTRUG00000025641	raver1	72	59.375	ENSMEUG00000003281	-	100	49.639	Notamacropus_eugenii
ENSTRUG00000025641	raver1	62	85.714	ENSODEG00000016260	RAVER1	75	85.714	Octodon_degus
ENSTRUG00000025641	raver1	92	76.652	ENSONIG00000001559	raver1	99	78.739	Oreochromis_niloticus
ENSTRUG00000025641	raver1	80	55.372	ENSOCUG00000020918	RAVER1	98	49.174	Oryctolagus_cuniculus
ENSTRUG00000025641	raver1	100	76.599	ENSORLG00000005458	raver1	98	76.657	Oryzias_latipes
ENSTRUG00000025641	raver1	100	77.143	ENSORLG00020004392	raver1	98	77.210	Oryzias_latipes_hni
ENSTRUG00000025641	raver1	100	77.279	ENSORLG00015017222	raver1	98	77.348	Oryzias_latipes_hsok
ENSTRUG00000025641	raver1	94	76.419	ENSOMEG00000023956	raver1	98	73.740	Oryzias_melastigma
ENSTRUG00000025641	raver1	94	50.536	ENSOGAG00000011071	RAVER1	97	50.267	Otolemur_garnettii
ENSTRUG00000025641	raver1	65	54.747	ENSOARG00000015886	RAVER1	94	48.971	Ovis_aries
ENSTRUG00000025641	raver1	91	50.548	ENSPPAG00000002611	RAVER1	94	50.964	Pan_paniscus
ENSTRUG00000025641	raver1	93	50.202	ENSPPRG00000009912	RAVER1	96	50.270	Panthera_pardus
ENSTRUG00000025641	raver1	91	50.548	ENSPTRG00000010466	RAVER1	94	50.964	Pan_troglodytes
ENSTRUG00000025641	raver1	78	59.553	ENSPANG00000004122	RAVER1	94	51.172	Papio_anubis
ENSTRUG00000025641	raver1	65	57.637	ENSPEMG00000016411	-	97	49.797	Peromyscus_maniculatus_bairdii
ENSTRUG00000025641	raver1	91	53.411	ENSPCIG00000018695	-	98	53.058	Phascolarctos_cinereus
ENSTRUG00000025641	raver1	100	71.295	ENSPFOG00000007016	raver1	98	73.469	Poecilia_formosa
ENSTRUG00000025641	raver1	95	72.571	ENSPLAG00000020793	raver1	97	72.926	Poecilia_latipinna
ENSTRUG00000025641	raver1	100	74.220	ENSPMEG00000011220	raver1	98	74.586	Poecilia_mexicana
ENSTRUG00000025641	raver1	100	70.692	ENSPREG00000006864	raver1	98	70.994	Poecilia_reticulata
ENSTRUG00000025641	raver1	65	60.000	ENSPPYG00000010514	RAVER1	80	51.872	Pongo_abelii
ENSTRUG00000025641	raver1	93	50.335	ENSPCOG00000026605	RAVER1	96	50.599	Propithecus_coquereli
ENSTRUG00000025641	raver1	71	85.714	ENSPVAG00000003689	RAVER1	98	50.271	Pteropus_vampyrus
ENSTRUG00000025641	raver1	100	73.641	ENSPNYG00000013284	raver1	98	75.448	Pundamilia_nyererei
ENSTRUG00000025641	raver1	98	65.390	ENSPNAG00000015476	raver1	98	66.120	Pygocentrus_nattereri
ENSTRUG00000025641	raver1	91	50.000	ENSRNOG00000020710	Raver1	97	50.471	Rattus_norvegicus
ENSTRUG00000025641	raver1	91	51.381	ENSRBIG00000034702	RAVER1	94	52.286	Rhinopithecus_bieti
ENSTRUG00000025641	raver1	91	51.199	ENSRROG00000031186	RAVER1	94	52.286	Rhinopithecus_roxellana
ENSTRUG00000025641	raver1	94	51.806	ENSSBOG00000023423	RAVER1	96	52.083	Saimiri_boliviensis_boliviensis
ENSTRUG00000025641	raver1	85	52.519	ENSSHAG00000008181	-	90	52.824	Sarcophilus_harrisii
ENSTRUG00000025641	raver1	98	80.414	ENSSMAG00000004546	raver1	99	81.241	Scophthalmus_maximus
ENSTRUG00000025641	raver1	98	82.044	ENSSDUG00000021063	raver1	98	82.873	Seriola_dumerili
ENSTRUG00000025641	raver1	98	81.768	ENSSLDG00000014505	raver1	98	82.597	Seriola_lalandi_dorsalis
ENSTRUG00000025641	raver1	98	81.492	ENSSPAG00000000688	raver1	98	82.182	Stegastes_partitus
ENSTRUG00000025641	raver1	74	85.714	ENSSSCG00000013650	-	98	51.393	Sus_scrofa
ENSTRUG00000025641	raver1	80	56.000	ENSTTRG00000009552	RAVER1	98	50.270	Tursiops_truncatus
ENSTRUG00000025641	raver1	93	49.531	ENSUAMG00000020385	RAVER1	96	49.664	Ursus_americanus
ENSTRUG00000025641	raver1	67	57.451	ENSVVUG00000028976	RAVER1	97	50.902	Vulpes_vulpes
ENSTRUG00000025641	raver1	92	50.704	ENSXETG00000011622	raver1	96	50.704	Xenopus_tropicalis
ENSTRUG00000025641	raver1	100	75.441	ENSXCOG00000016368	raver1	98	75.829	Xiphophorus_couchianus
ENSTRUG00000025641	raver1	100	75.441	ENSXMAG00000000217	raver1	98	75.829	Xiphophorus_maculatus