EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000025880 (Gene tree)
Gene ID: 101061024
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Plus strand
Length: 4500 bases
Position: chr2:6520262-6524761
Accession: 101061024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000053175	PseudoU_synth_2	PF00849.22	1.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000054388	-	4187	XM_003962681	ENSTRUP00000053175	531 (aa)	XP_003962730	UPI0005D236DB

Gene Model

Click here to download ENSTRUG00000025880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025880	rpusd2	90	55.950	ENSG00000166133	RPUSD2	80	56.559	Homo_sapiens
ENSTRUG00000025880	rpusd2	99	72.575	ENSAPOG00000000817	rpusd2	91	72.575	Acanthochromis_polyacanthus
ENSTRUG00000025880	rpusd2	98	53.131	ENSAMEG00000016996	RPUSD2	80	55.699	Ailuropoda_melanoleuca
ENSTRUG00000025880	rpusd2	99	73.120	ENSACIG00000024029	rpusd2	100	73.308	Amphilophus_citrinellus
ENSTRUG00000025880	rpusd2	99	72.458	ENSAOCG00000015237	rpusd2	92	71.956	Amphiprion_ocellaris
ENSTRUG00000025880	rpusd2	99	72.274	ENSAPEG00000021763	rpusd2	92	71.771	Amphiprion_percula
ENSTRUG00000025880	rpusd2	99	72.523	ENSATEG00000015242	rpusd2	90	72.523	Anabas_testudineus
ENSTRUG00000025880	rpusd2	85	56.667	ENSAPLG00000004723	RPUSD2	99	56.222	Anas_platyrhynchos
ENSTRUG00000025880	rpusd2	88	55.437	ENSACAG00000013893	RPUSD2	91	55.437	Anolis_carolinensis
ENSTRUG00000025880	rpusd2	90	55.950	ENSANAG00000009691	RPUSD2	80	56.438	Aotus_nancymaae
ENSTRUG00000025880	rpusd2	97	74.369	ENSACLG00000019531	rpusd2	88	74.369	Astatotilapia_calliptera
ENSTRUG00000025880	rpusd2	94	64.885	ENSAMXG00000013376	rpusd2	85	65.192	Astyanax_mexicanus
ENSTRUG00000025880	rpusd2	90	56.159	ENSBTAG00000003193	RPUSD2	79	55.675	Bos_taurus
ENSTRUG00000025880	rpusd2	66	37.500	WBGene00019498	K07E8.7	75	42.456	Caenorhabditis_elegans
ENSTRUG00000025880	rpusd2	90	55.115	ENSCJAG00000020841	RPUSD2	80	55.579	Callithrix_jacchus
ENSTRUG00000025880	rpusd2	94	55.200	ENSCAFG00000009165	RPUSD2	79	56.774	Canis_familiaris
ENSTRUG00000025880	rpusd2	94	55.200	ENSCAFG00020005849	RPUSD2	79	56.774	Canis_lupus_dingo
ENSTRUG00000025880	rpusd2	90	55.741	ENSCHIG00000006152	RPUSD2	79	55.246	Capra_hircus
ENSTRUG00000025880	rpusd2	99	51.527	ENSTSYG00000012844	RPUSD2	81	55.484	Carlito_syrichta
ENSTRUG00000025880	rpusd2	96	54.795	ENSCPOG00000013201	RPUSD2	80	57.173	Cavia_porcellus
ENSTRUG00000025880	rpusd2	90	55.532	ENSCCAG00000024378	RPUSD2	80	56.223	Cebus_capucinus
ENSTRUG00000025880	rpusd2	90	56.576	ENSCATG00000043734	RPUSD2	80	57.082	Cercocebus_atys
ENSTRUG00000025880	rpusd2	92	55.263	ENSCLAG00000011862	RPUSD2	80	56.344	Chinchilla_lanigera
ENSTRUG00000025880	rpusd2	90	56.367	ENSCSAG00000007538	RPUSD2	85	57.082	Chlorocebus_sabaeus
ENSTRUG00000025880	rpusd2	69	53.117	ENSCHOG00000004834	RPUSD2	63	53.117	Choloepus_hoffmanni
ENSTRUG00000025880	rpusd2	90	57.347	ENSCPBG00000013419	RPUSD2	87	57.292	Chrysemys_picta_bellii
ENSTRUG00000025880	rpusd2	50	40.824	ENSCSAVG00000007812	-	90	40.824	Ciona_savignyi
ENSTRUG00000025880	rpusd2	90	56.367	ENSCANG00000003659	RPUSD2	80	56.867	Colobus_angolensis_palliatus
ENSTRUG00000025880	rpusd2	90	55.625	ENSCGRG00001009839	Rpusd2	76	55.460	Cricetulus_griseus_chok1gshd
ENSTRUG00000025880	rpusd2	90	55.625	ENSCGRG00000012348	Rpusd2	78	55.460	Cricetulus_griseus_crigri
ENSTRUG00000025880	rpusd2	99	65.121	ENSCSEG00000001953	rpusd2	90	64.193	Cynoglossus_semilaevis
ENSTRUG00000025880	rpusd2	98	74.280	ENSCVAG00000010848	rpusd2	88	73.614	Cyprinodon_variegatus
ENSTRUG00000025880	rpusd2	97	65.830	ENSDARG00000060992	rpusd2	85	65.830	Danio_rerio
ENSTRUG00000025880	rpusd2	94	52.800	ENSDNOG00000047745	RPUSD2	80	54.721	Dasypus_novemcinctus
ENSTRUG00000025880	rpusd2	87	55.172	ENSDORG00000009092	Rpusd2	99	55.098	Dipodomys_ordii
ENSTRUG00000025880	rpusd2	94	41.879	FBgn0051719	RluA-1	62	43.737	Drosophila_melanogaster
ENSTRUG00000025880	rpusd2	99	40.076	FBgn0032256	RluA-2	87	39.887	Drosophila_melanogaster
ENSTRUG00000025880	rpusd2	90	56.667	ENSETEG00000008581	RPUSD2	82	57.569	Echinops_telfairi
ENSTRUG00000025880	rpusd2	84	33.406	ENSEBUG00000012149	rpusd2	68	55.319	Eptatretus_burgeri
ENSTRUG00000025880	rpusd2	90	55.532	ENSEASG00005016463	RPUSD2	78	56.009	Equus_asinus_asinus
ENSTRUG00000025880	rpusd2	90	55.532	ENSECAG00000024178	RPUSD2	78	56.009	Equus_caballus
ENSTRUG00000025880	rpusd2	90	48.643	ENSEEUG00000005132	RPUSD2	83	49.036	Erinaceus_europaeus
ENSTRUG00000025880	rpusd2	99	65.348	ENSELUG00000016786	rpusd2	91	65.348	Esox_lucius
ENSTRUG00000025880	rpusd2	98	52.150	ENSFCAG00000040796	RPUSD2	79	55.769	Felis_catus
ENSTRUG00000025880	rpusd2	86	57.895	ENSFALG00000001122	RPUSD2	96	57.053	Ficedula_albicollis
ENSTRUG00000025880	rpusd2	98	52.490	ENSFDAG00000003070	RPUSD2	85	55.675	Fukomys_damarensis
ENSTRUG00000025880	rpusd2	95	72.798	ENSFHEG00000007518	rpusd2	88	72.603	Fundulus_heteroclitus
ENSTRUG00000025880	rpusd2	94	70.884	ENSGMOG00000011014	rpusd2	98	70.884	Gadus_morhua
ENSTRUG00000025880	rpusd2	89	56.596	ENSGALG00000041216	RPUSD2	93	56.838	Gallus_gallus
ENSTRUG00000025880	rpusd2	99	72.779	ENSGAFG00000003390	rpusd2	88	71.834	Gambusia_affinis
ENSTRUG00000025880	rpusd2	99	72.881	ENSGACG00000008656	rpusd2	99	72.505	Gasterosteus_aculeatus
ENSTRUG00000025880	rpusd2	90	58.420	ENSGAGG00000013098	RPUSD2	84	58.280	Gopherus_agassizii
ENSTRUG00000025880	rpusd2	90	55.115	ENSGGOG00000006684	RPUSD2	80	55.699	Gorilla_gorilla
ENSTRUG00000025880	rpusd2	97	74.563	ENSHBUG00000023777	rpusd2	88	74.563	Haplochromis_burtoni
ENSTRUG00000025880	rpusd2	97	52.408	ENSHGLG00000012765	RPUSD2	80	54.818	Heterocephalus_glaber_female
ENSTRUG00000025880	rpusd2	97	52.408	ENSHGLG00100006653	RPUSD2	80	54.818	Heterocephalus_glaber_male
ENSTRUG00000025880	rpusd2	97	71.899	ENSHCOG00000015587	rpusd2	85	71.512	Hippocampus_comes
ENSTRUG00000025880	rpusd2	93	68.548	ENSIPUG00000021006	rpusd2	81	68.347	Ictalurus_punctatus
ENSTRUG00000025880	rpusd2	94	53.785	ENSSTOG00000025619	RPUSD2	79	55.699	Ictidomys_tridecemlineatus
ENSTRUG00000025880	rpusd2	88	56.531	ENSJJAG00000023160	Rpusd2	82	56.317	Jaculus_jaculus
ENSTRUG00000025880	rpusd2	95	74.653	ENSKMAG00000006618	rpusd2	85	74.257	Kryptolebias_marmoratus
ENSTRUG00000025880	rpusd2	96	74.903	ENSLBEG00000021571	rpusd2	91	73.221	Labrus_bergylta
ENSTRUG00000025880	rpusd2	87	57.684	ENSLACG00000017338	RPUSD2	99	57.447	Latimeria_chalumnae
ENSTRUG00000025880	rpusd2	95	64.016	ENSLOCG00000014755	rpusd2	96	63.548	Lepisosteus_oculatus
ENSTRUG00000025880	rpusd2	95	54.473	ENSLAFG00000015588	RPUSD2	83	56.503	Loxodonta_africana
ENSTRUG00000025880	rpusd2	90	56.576	ENSMFAG00000045062	RPUSD2	80	57.082	Macaca_fascicularis
ENSTRUG00000025880	rpusd2	90	56.576	ENSMMUG00000001483	RPUSD2	80	57.082	Macaca_mulatta
ENSTRUG00000025880	rpusd2	90	49.378	ENSMNEG00000041429	RPUSD2	80	49.680	Macaca_nemestrina
ENSTRUG00000025880	rpusd2	69	54.865	ENSMLEG00000036551	RPUSD2	80	54.865	Mandrillus_leucophaeus
ENSTRUG00000025880	rpusd2	99	72.161	ENSMAMG00000001077	rpusd2	89	72.161	Mastacembelus_armatus
ENSTRUG00000025880	rpusd2	97	74.369	ENSMZEG00005006947	rpusd2	97	74.369	Maylandia_zebra
ENSTRUG00000025880	rpusd2	89	56.992	ENSMGAG00000003058	RPUSD2	96	57.479	Meleagris_gallopavo
ENSTRUG00000025880	rpusd2	96	53.229	ENSMAUG00000020467	Rpusd2	78	55.365	Mesocricetus_auratus
ENSTRUG00000025880	rpusd2	96	53.981	ENSMICG00000028637	RPUSD2	80	55.794	Microcebus_murinus
ENSTRUG00000025880	rpusd2	95	53.150	ENSMOCG00000020061	Rpusd2	78	55.484	Microtus_ochrogaster
ENSTRUG00000025880	rpusd2	96	78.740	ENSMMOG00000012020	rpusd2	87	78.346	Mola_mola
ENSTRUG00000025880	rpusd2	89	56.576	ENSMODG00000000300	RPUSD2	80	56.989	Monodelphis_domestica
ENSTRUG00000025880	rpusd2	100	71.165	ENSMALG00000010024	rpusd2	90	69.944	Monopterus_albus
ENSTRUG00000025880	rpusd2	90	55.858	MGP_CAROLIEiJ_G0024130	Rpusd2	78	55.484	Mus_caroli
ENSTRUG00000025880	rpusd2	90	55.649	ENSMUSG00000027324	Rpusd2	78	55.579	Mus_musculus
ENSTRUG00000025880	rpusd2	90	55.532	MGP_PahariEiJ_G0025573	Rpusd2	78	55.794	Mus_pahari
ENSTRUG00000025880	rpusd2	90	55.324	MGP_SPRETEiJ_G0025046	Rpusd2	78	55.579	Mus_spretus
ENSTRUG00000025880	rpusd2	94	55.400	ENSMPUG00000008517	RPUSD2	79	56.129	Mustela_putorius_furo
ENSTRUG00000025880	rpusd2	90	56.367	ENSMLUG00000007971	RPUSD2	86	56.531	Myotis_lucifugus
ENSTRUG00000025880	rpusd2	98	53.346	ENSNGAG00000014126	Rpusd2	79	56.559	Nannospalax_galili
ENSTRUG00000025880	rpusd2	97	72.816	ENSNBRG00000010070	rpusd2	88	72.816	Neolamprologus_brichardi
ENSTRUG00000025880	rpusd2	90	55.324	ENSNLEG00000035735	RPUSD2	80	55.128	Nomascus_leucogenys
ENSTRUG00000025880	rpusd2	98	54.335	ENSMEUG00000008500	RPUSD2	83	56.989	Notamacropus_eugenii
ENSTRUG00000025880	rpusd2	94	54.200	ENSOPRG00000014177	-	80	55.914	Ochotona_princeps
ENSTRUG00000025880	rpusd2	95	54.762	ENSODEG00000017193	RPUSD2	81	56.652	Octodon_degus
ENSTRUG00000025880	rpusd2	96	73.777	ENSONIG00000020102	rpusd2	96	73.386	Oreochromis_niloticus
ENSTRUG00000025880	rpusd2	90	56.367	ENSOCUG00000015745	RPUSD2	78	56.652	Oryctolagus_cuniculus
ENSTRUG00000025880	rpusd2	95	69.020	ENSORLG00000015516	rpusd2	87	68.872	Oryzias_latipes
ENSTRUG00000025880	rpusd2	95	69.291	ENSORLG00020010533	rpusd2	87	68.750	Oryzias_latipes_hni
ENSTRUG00000025880	rpusd2	96	68.164	ENSORLG00015009206	rpusd2	88	66.987	Oryzias_latipes_hsok
ENSTRUG00000025880	rpusd2	99	68.311	ENSOMEG00000007355	rpusd2	83	68.311	Oryzias_melastigma
ENSTRUG00000025880	rpusd2	90	56.367	ENSOGAG00000004867	RPUSD2	84	56.867	Otolemur_garnettii
ENSTRUG00000025880	rpusd2	88	55.794	ENSOARG00000020235	RPUSD2	80	56.009	Ovis_aries
ENSTRUG00000025880	rpusd2	90	55.741	ENSPPAG00000032874	RPUSD2	80	55.794	Pan_paniscus
ENSTRUG00000025880	rpusd2	98	52.652	ENSPPRG00000010446	RPUSD2	80	55.484	Panthera_pardus
ENSTRUG00000025880	rpusd2	98	52.652	ENSPTIG00000013316	RPUSD2	80	55.484	Panthera_tigris_altaica
ENSTRUG00000025880	rpusd2	90	55.950	ENSPTRG00000006924	RPUSD2	80	56.559	Pan_troglodytes
ENSTRUG00000025880	rpusd2	90	56.785	ENSPANG00000019339	RPUSD2	80	57.296	Papio_anubis
ENSTRUG00000025880	rpusd2	95	61.343	ENSPKIG00000023017	rpusd2	82	61.151	Paramormyrops_kingsleyae
ENSTRUG00000025880	rpusd2	69	55.827	ENSPSIG00000012680	RPUSD2	99	55.467	Pelodiscus_sinensis
ENSTRUG00000025880	rpusd2	93	74.648	ENSPMGG00000018165	rpusd2	83	81.649	Periophthalmus_magnuspinnatus
ENSTRUG00000025880	rpusd2	90	54.470	ENSPEMG00000012878	Rpusd2	81	54.915	Peromyscus_maniculatus_bairdii
ENSTRUG00000025880	rpusd2	90	55.208	ENSPCIG00000023199	RPUSD2	79	53.763	Phascolarctos_cinereus
ENSTRUG00000025880	rpusd2	95	73.757	ENSPFOG00000006829	rpusd2	85	73.161	Poecilia_formosa
ENSTRUG00000025880	rpusd2	95	73.956	ENSPLAG00000022914	rpusd2	96	72.962	Poecilia_latipinna
ENSTRUG00000025880	rpusd2	95	73.559	ENSPMEG00000009835	rpusd2	96	72.962	Poecilia_mexicana
ENSTRUG00000025880	rpusd2	95	74.354	ENSPREG00000016441	rpusd2	82	73.757	Poecilia_reticulata
ENSTRUG00000025880	rpusd2	92	54.564	ENSPPYG00000006355	RPUSD2	80	55.342	Pongo_abelii
ENSTRUG00000025880	rpusd2	96	54.207	ENSPCOG00000028019	RPUSD2	80	56.223	Propithecus_coquereli
ENSTRUG00000025880	rpusd2	92	54.786	ENSPVAG00000001837	RPUSD2	80	56.559	Pteropus_vampyrus
ENSTRUG00000025880	rpusd2	95	73.477	ENSPNYG00000021507	rpusd2	94	73.477	Pundamilia_nyererei
ENSTRUG00000025880	rpusd2	96	53.033	ENSRNOG00000010528	LOC100911166	78	55.150	Rattus_norvegicus
ENSTRUG00000025880	rpusd2	96	53.033	ENSRNOG00000046797	Rpusd2	78	55.150	Rattus_norvegicus
ENSTRUG00000025880	rpusd2	90	56.159	ENSRBIG00000030813	RPUSD2	80	56.867	Rhinopithecus_bieti
ENSTRUG00000025880	rpusd2	90	55.950	ENSRROG00000026664	RPUSD2	80	56.652	Rhinopithecus_roxellana
ENSTRUG00000025880	rpusd2	55	45.973	YOL066C	RIB2	50	45.973	Saccharomyces_cerevisiae
ENSTRUG00000025880	rpusd2	51	46.763	YDL036C	-	60	46.763	Saccharomyces_cerevisiae
ENSTRUG00000025880	rpusd2	90	55.833	ENSSBOG00000035031	RPUSD2	80	56.438	Saimiri_boliviensis_boliviensis
ENSTRUG00000025880	rpusd2	70	53.226	ENSSHAG00000015108	RPUSD2	90	53.495	Sarcophilus_harrisii
ENSTRUG00000025880	rpusd2	93	59.150	ENSSFOG00015019057	rpusd2	80	59.150	Scleropages_formosus
ENSTRUG00000025880	rpusd2	99	73.704	ENSSMAG00000000903	rpusd2	100	73.684	Scophthalmus_maximus
ENSTRUG00000025880	rpusd2	95	75.337	ENSSDUG00000019139	rpusd2	86	74.615	Seriola_dumerili
ENSTRUG00000025880	rpusd2	95	75.915	ENSSLDG00000005938	rpusd2	86	75.769	Seriola_lalandi_dorsalis
ENSTRUG00000025880	rpusd2	93	54.207	ENSSARG00000002792	RPUSD2	81	56.624	Sorex_araneus
ENSTRUG00000025880	rpusd2	94	53.770	ENSSPUG00000001206	RPUSD2	89	55.462	Sphenodon_punctatus
ENSTRUG00000025880	rpusd2	99	72.795	ENSSPAG00000003578	rpusd2	87	74.023	Stegastes_partitus
ENSTRUG00000025880	rpusd2	93	55.400	ENSSSCG00000036700	RPUSD2	79	56.438	Sus_scrofa
ENSTRUG00000025880	rpusd2	99	80.916	ENSTNIG00000017329	rpusd2	100	80.344	Tetraodon_nigroviridis
ENSTRUG00000025880	rpusd2	98	48.369	ENSTBEG00000007933	RPUSD2	80	51.398	Tupaia_belangeri
ENSTRUG00000025880	rpusd2	90	55.094	ENSTTRG00000010585	RPUSD2	80	56.009	Tursiops_truncatus
ENSTRUG00000025880	rpusd2	98	53.905	ENSUAMG00000001470	RPUSD2	85	57.204	Ursus_americanus
ENSTRUG00000025880	rpusd2	98	53.905	ENSUMAG00000012487	RPUSD2	70	57.204	Ursus_maritimus
ENSTRUG00000025880	rpusd2	91	55.187	ENSVPAG00000003844	RPUSD2	80	56.531	Vicugna_pacos
ENSTRUG00000025880	rpusd2	94	53.800	ENSVVUG00000026590	RPUSD2	79	56.867	Vulpes_vulpes
ENSTRUG00000025880	rpusd2	90	56.458	ENSXETG00000015973	rpusd2	94	57.235	Xenopus_tropicalis
ENSTRUG00000025880	rpusd2	99	71.375	ENSXMAG00000021821	rpusd2	99	72.287	Xiphophorus_maculatus