EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTRUG00000025949 (Gene tree)
Gene ID: 105417766
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Takifugu_rubripes
Status: putative
Strand: Minus strand
Length: 4569 bases
Position: chr18:5860886-5865454
Accession: 105417766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTRUP00000051186	MRP-S32	PF10210.9	1.6e-36	1	1
ENSTRUP00000056347	MRP-S32	PF10210.9	1.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTRUT00000055134	-	444	XM_011613402	ENSTRUP00000051186	147 (aa)	XP_011611704	-
ENSTRUT00000051306	-	444	-	ENSTRUP00000056347	147 (aa)	-	-

Gene Model

Click here to download ENSTRUG00000025949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTRUG00000025949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTRUG00000025949	mrpl42	99	73.288	ENSAPOG00000010677	mrpl42	100	73.288	Acanthochromis_polyacanthus
ENSTRUG00000025949	mrpl42	99	75.172	ENSAOCG00000011620	mrpl42	100	75.172	Amphiprion_ocellaris
ENSTRUG00000025949	mrpl42	99	75.172	ENSAPEG00000019516	mrpl42	100	75.172	Amphiprion_percula
ENSTRUG00000025949	mrpl42	89	77.099	ENSATEG00000014106	mrpl42	100	77.099	Anabas_testudineus
ENSTRUG00000025949	mrpl42	99	55.479	ENSACAG00000012606	MRPL42	99	55.479	Anolis_carolinensis
ENSTRUG00000025949	mrpl42	99	71.724	ENSACLG00000026856	mrpl42	100	71.724	Astatotilapia_calliptera
ENSTRUG00000025949	mrpl42	74	52.294	ENSAMXG00000035149	mrpl42	80	52.294	Astyanax_mexicanus
ENSTRUG00000025949	mrpl42	98	64.583	ENSCSEG00000010067	mrpl42	99	64.583	Cynoglossus_semilaevis
ENSTRUG00000025949	mrpl42	99	68.276	ENSCVAG00000002612	mrpl42	100	68.276	Cyprinodon_variegatus
ENSTRUG00000025949	mrpl42	99	53.103	ENSDARG00000079391	mrpl42	100	53.103	Danio_rerio
ENSTRUG00000025949	mrpl42	69	45.370	ENSEBUG00000005581	mrpl42	81	45.370	Eptatretus_burgeri
ENSTRUG00000025949	mrpl42	98	63.194	ENSELUG00000001973	mrpl42	99	63.194	Esox_lucius
ENSTRUG00000025949	mrpl42	99	65.517	ENSFHEG00000018696	mrpl42	100	65.517	Fundulus_heteroclitus
ENSTRUG00000025949	mrpl42	66	74.227	ENSGMOG00000002972	mrpl42	100	74.227	Gadus_morhua
ENSTRUG00000025949	mrpl42	99	67.586	ENSGAFG00000018373	mrpl42	100	67.586	Gambusia_affinis
ENSTRUG00000025949	mrpl42	66	82.474	ENSGACG00000018811	mrpl42	100	82.474	Gasterosteus_aculeatus
ENSTRUG00000025949	mrpl42	99	71.724	ENSHBUG00000015960	mrpl42	100	71.724	Haplochromis_burtoni
ENSTRUG00000025949	mrpl42	99	65.068	ENSHCOG00000014046	mrpl42	100	65.068	Hippocampus_comes
ENSTRUG00000025949	mrpl42	90	48.148	ENSIPUG00000015395	mrpl42	89	48.148	Ictalurus_punctatus
ENSTRUG00000025949	mrpl42	99	68.966	ENSKMAG00000013671	mrpl42	100	68.966	Kryptolebias_marmoratus
ENSTRUG00000025949	mrpl42	99	71.233	ENSLBEG00000028618	mrpl42	99	71.233	Labrus_bergylta
ENSTRUG00000025949	mrpl42	99	70.345	ENSMAMG00000009737	mrpl42	100	70.345	Mastacembelus_armatus
ENSTRUG00000025949	mrpl42	99	71.724	ENSMZEG00005008545	mrpl42	96	71.724	Maylandia_zebra
ENSTRUG00000025949	mrpl42	81	70.588	ENSMMOG00000002317	mrpl42	77	70.588	Mola_mola
ENSTRUG00000025949	mrpl42	99	63.871	ENSMALG00000015794	mrpl42	96	63.871	Monopterus_albus
ENSTRUG00000025949	mrpl42	99	71.724	ENSNBRG00000003307	mrpl42	100	71.724	Neolamprologus_brichardi
ENSTRUG00000025949	mrpl42	99	72.414	ENSONIG00000011753	mrpl42	100	72.414	Oreochromis_niloticus
ENSTRUG00000025949	mrpl42	100	47.651	ENSOANG00000019984	-	97	47.651	Ornithorhynchus_anatinus
ENSTRUG00000025949	mrpl42	99	64.384	ENSORLG00000013500	mrpl42	85	64.384	Oryzias_latipes
ENSTRUG00000025949	mrpl42	99	66.438	ENSORLG00020000548	mrpl42	100	66.438	Oryzias_latipes_hni
ENSTRUG00000025949	mrpl42	99	66.207	ENSORLG00015016984	mrpl42	100	66.207	Oryzias_latipes_hsok
ENSTRUG00000025949	mrpl42	99	68.276	ENSOMEG00000010700	mrpl42	100	68.276	Oryzias_melastigma
ENSTRUG00000025949	mrpl42	99	60.274	ENSPKIG00000025457	mrpl42	100	60.274	Paramormyrops_kingsleyae
ENSTRUG00000025949	mrpl42	66	80.412	ENSPMGG00000019705	mrpl42	69	80.412	Periophthalmus_magnuspinnatus
ENSTRUG00000025949	mrpl42	86	50.000	ENSPMAG00000008091	mrpl42	83	50.000	Petromyzon_marinus
ENSTRUG00000025949	mrpl42	99	67.123	ENSPFOG00000016539	mrpl42	99	67.123	Poecilia_formosa
ENSTRUG00000025949	mrpl42	99	66.897	ENSPLAG00000001255	mrpl42	100	66.897	Poecilia_latipinna
ENSTRUG00000025949	mrpl42	99	66.897	ENSPMEG00000016462	mrpl42	100	66.897	Poecilia_mexicana
ENSTRUG00000025949	mrpl42	89	61.832	ENSPREG00000012053	mrpl42	96	61.832	Poecilia_reticulata
ENSTRUG00000025949	mrpl42	99	71.724	ENSPNYG00000009586	mrpl42	100	71.724	Pundamilia_nyererei
ENSTRUG00000025949	mrpl42	97	50.704	ENSPNAG00000020753	mrpl42	97	50.704	Pygocentrus_nattereri
ENSTRUG00000025949	mrpl42	99	73.103	ENSSMAG00000000262	mrpl42	100	73.103	Scophthalmus_maximus
ENSTRUG00000025949	mrpl42	99	74.483	ENSSDUG00000005949	mrpl42	100	74.483	Seriola_dumerili
ENSTRUG00000025949	mrpl42	99	74.483	ENSSLDG00000010159	mrpl42	100	74.483	Seriola_lalandi_dorsalis
ENSTRUG00000025949	mrpl42	74	56.881	ENSXETG00000032902	mrpl42	88	56.881	Xenopus_tropicalis
ENSTRUG00000025949	mrpl42	99	60.811	ENSXCOG00000013875	mrpl42	99	60.811	Xiphophorus_couchianus