EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000000097 (Gene tree)
Gene ID: 103260790
Gene Symbol: SSB
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 11602 bases
Position: chrKE939469.1:94823-106424
Accession: 103260790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000000089	RRM_1	PF00076.22	2.8e-14	1	1
ENSTSYP00000022208	RRM_1	PF00076.22	3.2e-14	1	1
ENSTSYP00000000089	RRM_3	PF08777.11	2.5e-31	1	1
ENSTSYP00000022208	RRM_3	PF08777.11	2.7e-31	1	1
ENSTSYP00000000089	La	PF05383.17	6.7e-22	1	1
ENSTSYP00000022208	La	PF05383.17	6.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000036915	SSB-201	1678	XM_008058441	ENSTSYP00000022208	405 (aa)	XP_008056632	A0A1U7TU76
ENSTSYT00000000098	SSB-202	1167	-	ENSTSYP00000000089	388 (aa)	-	UPI000C2F4455

Gene Model

Click here to download ENSTSYG00000000097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000000097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000000097	SSB	100	95.098	ENSG00000138385	SSB	100	99.167	Homo_sapiens
ENSTSYG00000000097	SSB	98	54.863	ENSAPOG00000003448	ssb	99	55.309	Acanthochromis_polyacanthus
ENSTSYG00000000097	SSB	100	91.190	ENSAMEG00000010507	SSB	100	91.190	Ailuropoda_melanoleuca
ENSTSYG00000000097	SSB	92	58.289	ENSACIG00000001738	ssb	97	58.133	Amphilophus_citrinellus
ENSTSYG00000000097	SSB	98	55.112	ENSAOCG00000020398	ssb	99	55.802	Amphiprion_ocellaris
ENSTSYG00000000097	SSB	98	55.362	ENSAPEG00000020395	ssb	99	56.049	Amphiprion_percula
ENSTSYG00000000097	SSB	99	58.025	ENSATEG00000016884	ssb	99	58.519	Anabas_testudineus
ENSTSYG00000000097	SSB	100	69.811	ENSAPLG00000006109	SSB	100	71.294	Anas_platyrhynchos
ENSTSYG00000000097	SSB	100	66.341	ENSACAG00000017008	SSB	99	66.341	Anolis_carolinensis
ENSTSYG00000000097	SSB	100	86.420	ENSANAG00000027195	-	100	86.420	Aotus_nancymaae
ENSTSYG00000000097	SSB	99	54.342	ENSACLG00000010798	ssb	99	54.094	Astatotilapia_calliptera
ENSTSYG00000000097	SSB	98	54.791	ENSAMXG00000012606	ssb	99	55.825	Astyanax_mexicanus
ENSTSYG00000000097	SSB	100	94.568	ENSBTAG00000008716	SSB	100	94.568	Bos_taurus
ENSTSYG00000000097	SSB	73	35.430	WBGene00016653	C44E4.4	85	34.018	Caenorhabditis_elegans
ENSTSYG00000000097	SSB	100	95.062	ENSCJAG00000045073	SSB	100	95.062	Callithrix_jacchus
ENSTSYG00000000097	SSB	100	94.335	ENSCAFG00000012418	SSB	100	94.335	Canis_familiaris
ENSTSYG00000000097	SSB	100	94.335	ENSCAFG00020002900	SSB	100	94.335	Canis_lupus_dingo
ENSTSYG00000000097	SSB	100	89.136	ENSCHIG00000022196	-	100	89.136	Capra_hircus
ENSTSYG00000000097	SSB	100	94.568	ENSCHIG00000022624	-	100	94.568	Capra_hircus
ENSTSYG00000000097	SSB	100	96.049	ENSCPOG00000003338	SSB	100	96.049	Cavia_porcellus
ENSTSYG00000000097	SSB	100	95.556	ENSCCAG00000035147	SSB	100	95.556	Cebus_capucinus
ENSTSYG00000000097	SSB	100	70.370	ENSCATG00000042909	-	100	69.873	Cercocebus_atys
ENSTSYG00000000097	SSB	100	73.333	ENSCATG00000036701	SSB	100	74.321	Cercocebus_atys
ENSTSYG00000000097	SSB	100	95.802	ENSCLAG00000015617	-	100	95.802	Chinchilla_lanigera
ENSTSYG00000000097	SSB	98	87.406	ENSCSAG00000018390	-	100	87.406	Chlorocebus_sabaeus
ENSTSYG00000000097	SSB	100	95.309	ENSCSAG00000015200	SSB	89	95.309	Chlorocebus_sabaeus
ENSTSYG00000000097	SSB	100	94.568	ENSCHOG00000007763	SSB	100	94.568	Choloepus_hoffmanni
ENSTSYG00000000097	SSB	100	77.506	ENSCPBG00000006519	SSB	100	78.240	Chrysemys_picta_bellii
ENSTSYG00000000097	SSB	98	74.937	ENSCANG00000028838	-	95	74.937	Colobus_angolensis_palliatus
ENSTSYG00000000097	SSB	100	81.235	ENSCANG00000033240	-	100	81.235	Colobus_angolensis_palliatus
ENSTSYG00000000097	SSB	100	95.309	ENSCANG00000027695	SSB	100	95.309	Colobus_angolensis_palliatus
ENSTSYG00000000097	SSB	100	79.268	ENSCGRG00001024831	Ssb	100	80.488	Cricetulus_griseus_chok1gshd
ENSTSYG00000000097	SSB	100	79.268	ENSCGRG00000005387	Ssb	100	80.488	Cricetulus_griseus_crigri
ENSTSYG00000000097	SSB	98	56.892	ENSCSEG00000011599	ssb	99	57.644	Cynoglossus_semilaevis
ENSTSYG00000000097	SSB	99	57.389	ENSCVAG00000021558	ssb	99	57.882	Cyprinodon_variegatus
ENSTSYG00000000097	SSB	98	57.107	ENSDARG00000029252	ssb	99	57.107	Danio_rerio
ENSTSYG00000000097	SSB	100	94.321	ENSDNOG00000013450	SSB	100	94.321	Dasypus_novemcinctus
ENSTSYG00000000097	SSB	100	85.608	ENSDORG00000005543	Ssb	100	85.608	Dipodomys_ordii
ENSTSYG00000000097	SSB	83	36.095	FBgn0011638	La	92	35.813	Drosophila_melanogaster
ENSTSYG00000000097	SSB	58	94.527	ENSETEG00000004614	-	61	94.527	Echinops_telfairi
ENSTSYG00000000097	SSB	96	47.959	ENSEBUG00000001237	ssb	96	47.194	Eptatretus_burgeri
ENSTSYG00000000097	SSB	100	95.556	ENSEASG00005022835	SSB	100	95.556	Equus_asinus_asinus
ENSTSYG00000000097	SSB	100	95.802	ENSECAG00000018495	SSB	100	95.802	Equus_caballus
ENSTSYG00000000097	SSB	74	80.277	ENSEEUG00000008077	SSB	78	80.277	Erinaceus_europaeus
ENSTSYG00000000097	SSB	98	59.102	ENSELUG00000020929	ssb	99	59.606	Esox_lucius
ENSTSYG00000000097	SSB	100	94.089	ENSFCAG00000011601	SSB	100	94.089	Felis_catus
ENSTSYG00000000097	SSB	100	74.020	ENSFALG00000000930	SSB	100	75.184	Ficedula_albicollis
ENSTSYG00000000097	SSB	100	95.556	ENSFDAG00000000598	SSB	100	95.556	Fukomys_damarensis
ENSTSYG00000000097	SSB	72	54.515	ENSFHEG00000003268	ssb	95	54.902	Fundulus_heteroclitus
ENSTSYG00000000097	SSB	97	54.115	ENSGMOG00000002664	ssb	99	54.613	Gadus_morhua
ENSTSYG00000000097	SSB	100	74.265	ENSGALG00000009677	SSB	100	74.265	Gallus_gallus
ENSTSYG00000000097	SSB	99	55.802	ENSGAFG00000002749	ssb	99	56.049	Gambusia_affinis
ENSTSYG00000000097	SSB	99	53.771	ENSGACG00000005107	ssb	99	54.126	Gasterosteus_aculeatus
ENSTSYG00000000097	SSB	100	77.262	ENSGAGG00000007807	SSB	100	77.506	Gopherus_agassizii
ENSTSYG00000000097	SSB	100	78.519	ENSGGOG00000024891	-	100	78.519	Gorilla_gorilla
ENSTSYG00000000097	SSB	63	91.111	ENSGGOG00000023471	-	100	91.111	Gorilla_gorilla
ENSTSYG00000000097	SSB	99	53.846	ENSHBUG00000006584	ssb	99	53.598	Haplochromis_burtoni
ENSTSYG00000000097	SSB	100	86.732	ENSHGLG00000004478	-	100	86.732	Heterocephalus_glaber_female
ENSTSYG00000000097	SSB	100	86.420	ENSHGLG00000005832	-	100	86.420	Heterocephalus_glaber_female
ENSTSYG00000000097	SSB	100	93.932	ENSHGLG00000017580	-	100	93.932	Heterocephalus_glaber_female
ENSTSYG00000000097	SSB	50	94.828	ENSHGLG00000011331	-	98	93.590	Heterocephalus_glaber_female
ENSTSYG00000000097	SSB	100	93.932	ENSHGLG00100003084	-	100	93.932	Heterocephalus_glaber_male
ENSTSYG00000000097	SSB	100	81.235	ENSHGLG00100008767	-	100	81.235	Heterocephalus_glaber_male
ENSTSYG00000000097	SSB	97	55.808	ENSHCOG00000019011	ssb	99	56.061	Hippocampus_comes
ENSTSYG00000000097	SSB	97	57.606	ENSIPUG00000003681	SSB	98	58.065	Ictalurus_punctatus
ENSTSYG00000000097	SSB	100	95.802	ENSSTOG00000008416	SSB	100	95.802	Ictidomys_tridecemlineatus
ENSTSYG00000000097	SSB	99	68.983	ENSJJAG00000016250	-	99	68.983	Jaculus_jaculus
ENSTSYG00000000097	SSB	100	81.087	ENSJJAG00000023158	-	100	80.142	Jaculus_jaculus
ENSTSYG00000000097	SSB	99	56.543	ENSKMAG00000017317	ssb	99	57.037	Kryptolebias_marmoratus
ENSTSYG00000000097	SSB	98	54.115	ENSLBEG00000017345	ssb	99	55.062	Labrus_bergylta
ENSTSYG00000000097	SSB	99	66.093	ENSLACG00000014056	SSB	99	68.949	Latimeria_chalumnae
ENSTSYG00000000097	SSB	98	67.250	ENSLOCG00000007933	ssb	98	67.750	Lepisosteus_oculatus
ENSTSYG00000000097	SSB	75	69.536	ENSLAFG00000026721	-	99	69.536	Loxodonta_africana
ENSTSYG00000000097	SSB	100	79.753	ENSLAFG00000028909	-	100	79.753	Loxodonta_africana
ENSTSYG00000000097	SSB	100	86.256	ENSLAFG00000000867	-	100	89.100	Loxodonta_africana
ENSTSYG00000000097	SSB	88	84.118	ENSMFAG00000041478	-	100	84.118	Macaca_fascicularis
ENSTSYG00000000097	SSB	100	95.556	ENSMFAG00000039066	SSB	100	95.556	Macaca_fascicularis
ENSTSYG00000000097	SSB	100	80.741	ENSMMUG00000011724	-	97	80.741	Macaca_mulatta
ENSTSYG00000000097	SSB	99	66.253	ENSMMUG00000039889	-	100	65.903	Macaca_mulatta
ENSTSYG00000000097	SSB	100	95.556	ENSMMUG00000023051	SSB	100	95.556	Macaca_mulatta
ENSTSYG00000000097	SSB	100	83.461	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSTSYG00000000097	SSB	88	84.118	ENSMNEG00000034698	-	100	84.118	Macaca_nemestrina
ENSTSYG00000000097	SSB	100	68.814	ENSMLEG00000042644	-	100	68.814	Mandrillus_leucophaeus
ENSTSYG00000000097	SSB	100	95.556	ENSMLEG00000035717	SSB	100	95.556	Mandrillus_leucophaeus
ENSTSYG00000000097	SSB	99	57.778	ENSMAMG00000004800	ssb	99	58.272	Mastacembelus_armatus
ENSTSYG00000000097	SSB	99	54.342	ENSMZEG00005005749	ssb	99	54.094	Maylandia_zebra
ENSTSYG00000000097	SSB	100	74.265	ENSMGAG00000010328	SSB	99	77.073	Meleagris_gallopavo
ENSTSYG00000000097	SSB	99	96.509	ENSMICG00000028252	-	99	96.509	Microcebus_murinus
ENSTSYG00000000097	SSB	98	88.161	ENSMICG00000033304	-	95	91.667	Microcebus_murinus
ENSTSYG00000000097	SSB	100	78.313	ENSMODG00000008227	-	100	79.036	Monodelphis_domestica
ENSTSYG00000000097	SSB	100	71.907	ENSMODG00000019271	-	100	71.907	Monodelphis_domestica
ENSTSYG00000000097	SSB	100	68.299	ENSMODG00000007027	-	99	81.132	Monodelphis_domestica
ENSTSYG00000000097	SSB	89	58.074	ENSMALG00000008045	ssb	90	58.886	Monopterus_albus
ENSTSYG00000000097	SSB	100	78.147	MGP_CAROLIEiJ_G0023629	-	100	92.935	Mus_caroli
ENSTSYG00000000097	SSB	100	77.435	ENSMUSG00000068882	Ssb	100	92.935	Mus_musculus
ENSTSYG00000000097	SSB	100	77.435	MGP_PahariEiJ_G0025081	-	100	92.935	Mus_pahari
ENSTSYG00000000097	SSB	100	77.435	MGP_SPRETEiJ_G0024551	Ssb	100	92.935	Mus_spretus
ENSTSYG00000000097	SSB	100	95.062	ENSMPUG00000000785	SSB	100	95.062	Mustela_putorius_furo
ENSTSYG00000000097	SSB	100	89.286	ENSMLUG00000016316	SSB	100	89.286	Myotis_lucifugus
ENSTSYG00000000097	SSB	99	54.342	ENSNBRG00000012661	ssb	99	54.094	Neolamprologus_brichardi
ENSTSYG00000000097	SSB	100	70.180	ENSNLEG00000028754	-	100	70.694	Nomascus_leucogenys
ENSTSYG00000000097	SSB	100	95.802	ENSNLEG00000004958	SSB	100	95.802	Nomascus_leucogenys
ENSTSYG00000000097	SSB	61	88.710	ENSMEUG00000001650	-	100	88.710	Notamacropus_eugenii
ENSTSYG00000000097	SSB	72	74.138	ENSOPRG00000008475	-	100	74.138	Ochotona_princeps
ENSTSYG00000000097	SSB	93	88.360	ENSODEG00000004202	-	100	88.360	Octodon_degus
ENSTSYG00000000097	SSB	99	54.094	ENSONIG00000008776	ssb	99	53.846	Oreochromis_niloticus
ENSTSYG00000000097	SSB	100	83.704	ENSOANG00000008543	SSB	100	83.704	Ornithorhynchus_anatinus
ENSTSYG00000000097	SSB	100	94.815	ENSOCUG00000010396	SSB	100	94.815	Oryctolagus_cuniculus
ENSTSYG00000000097	SSB	99	57.284	ENSORLG00000017208	ssb	99	57.531	Oryzias_latipes
ENSTSYG00000000097	SSB	99	57.531	ENSORLG00020022574	ssb	99	57.778	Oryzias_latipes_hni
ENSTSYG00000000097	SSB	99	57.037	ENSORLG00015016592	ssb	99	57.284	Oryzias_latipes_hsok
ENSTSYG00000000097	SSB	98	57.500	ENSOMEG00000003193	ssb	99	58.416	Oryzias_melastigma
ENSTSYG00000000097	SSB	100	88.863	ENSOGAG00000029768	SSB	100	88.863	Otolemur_garnettii
ENSTSYG00000000097	SSB	100	94.568	ENSOARG00000002906	SSB	100	94.568	Ovis_aries
ENSTSYG00000000097	SSB	100	77.531	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSTSYG00000000097	SSB	97	74.619	ENSPPAG00000006189	-	96	77.151	Pan_paniscus
ENSTSYG00000000097	SSB	100	95.098	ENSPPAG00000042673	SSB	100	95.098	Pan_paniscus
ENSTSYG00000000097	SSB	100	94.089	ENSPPRG00000006599	SSB	100	94.089	Panthera_pardus
ENSTSYG00000000097	SSB	100	93.842	ENSPTIG00000011021	SSB	97	93.842	Panthera_tigris_altaica
ENSTSYG00000000097	SSB	100	74.550	ENSPTRG00000042880	-	100	74.550	Pan_troglodytes
ENSTSYG00000000097	SSB	100	95.098	ENSPTRG00000012620	SSB	100	95.098	Pan_troglodytes
ENSTSYG00000000097	SSB	100	68.974	ENSPANG00000034126	-	100	69.487	Papio_anubis
ENSTSYG00000000097	SSB	98	67.277	ENSPANG00000031877	-	95	67.277	Papio_anubis
ENSTSYG00000000097	SSB	100	95.556	ENSPANG00000007440	SSB	100	95.556	Papio_anubis
ENSTSYG00000000097	SSB	98	62.000	ENSPKIG00000019325	ssb	99	62.624	Paramormyrops_kingsleyae
ENSTSYG00000000097	SSB	100	75.061	ENSPSIG00000002265	SSB	93	75.306	Pelodiscus_sinensis
ENSTSYG00000000097	SSB	85	54.416	ENSPMGG00000020075	ssb	93	54.701	Periophthalmus_magnuspinnatus
ENSTSYG00000000097	SSB	81	50.606	ENSPMAG00000002982	ssb	100	45.647	Petromyzon_marinus
ENSTSYG00000000097	SSB	100	83.005	ENSPCIG00000028591	-	100	83.251	Phascolarctos_cinereus
ENSTSYG00000000097	SSB	99	56.790	ENSPFOG00000009650	ssb	99	57.037	Poecilia_formosa
ENSTSYG00000000097	SSB	99	56.543	ENSPLAG00000020498	ssb	99	56.790	Poecilia_latipinna
ENSTSYG00000000097	SSB	99	56.296	ENSPMEG00000001051	ssb	99	56.790	Poecilia_mexicana
ENSTSYG00000000097	SSB	94	57.031	ENSPREG00000003708	ssb	99	57.292	Poecilia_reticulata
ENSTSYG00000000097	SSB	100	95.802	ENSPPYG00000012919	SSB	100	95.802	Pongo_abelii
ENSTSYG00000000097	SSB	95	89.295	ENSPCAG00000010276	SSB	100	89.295	Procavia_capensis
ENSTSYG00000000097	SSB	100	83.951	ENSPCOG00000023189	-	100	83.951	Propithecus_coquereli
ENSTSYG00000000097	SSB	100	92.099	ENSPCOG00000015741	-	100	92.099	Propithecus_coquereli
ENSTSYG00000000097	SSB	87	96.034	ENSPVAG00000006615	SSB	99	96.034	Pteropus_vampyrus
ENSTSYG00000000097	SSB	99	54.342	ENSPNYG00000006444	ssb	99	54.094	Pundamilia_nyererei
ENSTSYG00000000097	SSB	98	56.543	ENSPNAG00000011708	ssb	99	57.664	Pygocentrus_nattereri
ENSTSYG00000000097	SSB	100	78.622	ENSRNOG00000007998	Ssb	100	78.622	Rattus_norvegicus
ENSTSYG00000000097	SSB	100	79.167	ENSRNOG00000011606	AABR07061825.1	100	79.167	Rattus_norvegicus
ENSTSYG00000000097	SSB	100	82.188	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSTSYG00000000097	SSB	89	87.017	ENSRBIG00000041608	-	98	87.017	Rhinopithecus_bieti
ENSTSYG00000000097	SSB	100	68.719	ENSRBIG00000029918	-	100	66.995	Rhinopithecus_bieti
ENSTSYG00000000097	SSB	94	79.683	ENSRBIG00000041232	-	98	79.683	Rhinopithecus_bieti
ENSTSYG00000000097	SSB	98	85.500	ENSRROG00000034102	-	98	85.427	Rhinopithecus_roxellana
ENSTSYG00000000097	SSB	98	80.808	ENSRROG00000031684	-	100	80.808	Rhinopithecus_roxellana
ENSTSYG00000000097	SSB	100	95.309	ENSRROG00000040346	SSB	100	95.309	Rhinopithecus_roxellana
ENSTSYG00000000097	SSB	100	78.571	ENSRROG00000007149	-	100	78.571	Rhinopithecus_roxellana
ENSTSYG00000000097	SSB	100	96.049	ENSSBOG00000027204	SSB	100	96.049	Saimiri_boliviensis_boliviensis
ENSTSYG00000000097	SSB	100	82.512	ENSSHAG00000018062	SSB	100	82.759	Sarcophilus_harrisii
ENSTSYG00000000097	SSB	99	64.059	ENSSFOG00015000550	ssb	100	64.548	Scleropages_formosus
ENSTSYG00000000097	SSB	98	55.759	ENSSMAG00000013885	ssb	99	57.219	Scophthalmus_maximus
ENSTSYG00000000097	SSB	99	57.037	ENSSDUG00000020117	ssb	99	57.284	Seriola_dumerili
ENSTSYG00000000097	SSB	99	57.254	ENSSLDG00000002525	ssb	99	57.254	Seriola_lalandi_dorsalis
ENSTSYG00000000097	SSB	95	85.640	ENSSARG00000007747	SSB	100	85.640	Sorex_araneus
ENSTSYG00000000097	SSB	100	75.921	ENSSPUG00000012112	SSB	100	75.921	Sphenodon_punctatus
ENSTSYG00000000097	SSB	98	55.362	ENSSPAG00000005696	ssb	99	56.049	Stegastes_partitus
ENSTSYG00000000097	SSB	98	77.834	ENSSSCG00000015938	SSB	98	77.889	Sus_scrofa
ENSTSYG00000000097	SSB	100	74.572	ENSTGUG00000007942	SSB	100	74.572	Taeniopygia_guttata
ENSTSYG00000000097	SSB	99	57.072	ENSTRUG00000017839	ssb	99	57.426	Takifugu_rubripes
ENSTSYG00000000097	SSB	90	59.783	ENSTNIG00000000915	ssb	100	59.511	Tetraodon_nigroviridis
ENSTSYG00000000097	SSB	82	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSTSYG00000000097	SSB	100	93.842	ENSTTRG00000002152	SSB	100	93.842	Tursiops_truncatus
ENSTSYG00000000097	SSB	93	96.552	ENSUAMG00000027833	SSB	99	96.552	Ursus_americanus
ENSTSYG00000000097	SSB	100	95.074	ENSUMAG00000013907	SSB	100	95.074	Ursus_maritimus
ENSTSYG00000000097	SSB	100	94.321	ENSVPAG00000007183	SSB	100	94.321	Vicugna_pacos
ENSTSYG00000000097	SSB	100	94.335	ENSVVUG00000016573	SSB	78	94.335	Vulpes_vulpes
ENSTSYG00000000097	SSB	99	58.685	ENSXETG00000025402	ssb	100	60.422	Xenopus_tropicalis
ENSTSYG00000000097	SSB	94	55.091	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSTSYG00000000097	SSB	99	56.049	ENSXMAG00000004888	ssb	99	56.296	Xiphophorus_maculatus