EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000000446 (Gene tree)
Gene ID: 103265757
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 39223 bases
Position: chrKE942321.1:237561-276783
Accession: 103265757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000000410	TruB_N	PF01509.18	1.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000000446	TRUB1-201	1649	XM_008063408	ENSTSYP00000000410	351 (aa)	XP_008061599	A0A1U7TNL9

Gene Model

Click here to download ENSTSYG00000000446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000000446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000000446	TRUB1	72	30.584	ENSTSYG00000034163	TRUB2	87	30.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000000446	TRUB1	100	91.168	ENSG00000165832	TRUB1	100	90.028	Homo_sapiens
ENSTSYG00000000446	TRUB1	70	68.571	ENSAPOG00000020565	trub1	89	68.293	Acanthochromis_polyacanthus
ENSTSYG00000000446	TRUB1	86	94.389	ENSAMEG00000014931	TRUB1	99	91.193	Ailuropoda_melanoleuca
ENSTSYG00000000446	TRUB1	81	56.690	ENSACIG00000003060	trub1	94	56.690	Amphilophus_citrinellus
ENSTSYG00000000446	TRUB1	70	68.571	ENSAOCG00000017188	trub1	89	68.293	Amphiprion_ocellaris
ENSTSYG00000000446	TRUB1	70	67.886	ENSAPEG00000015209	trub1	89	67.886	Amphiprion_percula
ENSTSYG00000000446	TRUB1	69	67.635	ENSATEG00000023291	trub1	86	67.635	Anabas_testudineus
ENSTSYG00000000446	TRUB1	78	74.909	ENSAPLG00000006808	TRUB1	99	74.909	Anas_platyrhynchos
ENSTSYG00000000446	TRUB1	77	71.375	ENSACAG00000009282	TRUB1	97	71.375	Anolis_carolinensis
ENSTSYG00000000446	TRUB1	96	92.285	ENSANAG00000022870	TRUB1	100	90.057	Aotus_nancymaae
ENSTSYG00000000446	TRUB1	72	66.270	ENSACLG00000000823	trub1	91	66.270	Astatotilapia_calliptera
ENSTSYG00000000446	TRUB1	77	64.815	ENSAMXG00000015845	trub1	90	64.815	Astyanax_mexicanus
ENSTSYG00000000446	TRUB1	98	89.213	ENSBTAG00000012955	TRUB1	99	89.489	Bos_taurus
ENSTSYG00000000446	TRUB1	100	91.193	ENSCJAG00000047815	TRUB1	100	90.057	Callithrix_jacchus
ENSTSYG00000000446	TRUB1	99	90.571	ENSCAFG00000011688	TRUB1	99	92.000	Canis_familiaris
ENSTSYG00000000446	TRUB1	99	90.857	ENSCAFG00020013237	TRUB1	99	92.286	Canis_lupus_dingo
ENSTSYG00000000446	TRUB1	86	96.013	ENSCHIG00000020884	TRUB1	99	90.598	Capra_hircus
ENSTSYG00000000446	TRUB1	72	84.252	ENSCAPG00000017088	TRUB1	100	84.252	Cavia_aperea
ENSTSYG00000000446	TRUB1	71	78.313	ENSCPOG00000030129	-	76	91.795	Cavia_porcellus
ENSTSYG00000000446	TRUB1	70	82.114	ENSCPOG00000040236	-	100	81.707	Cavia_porcellus
ENSTSYG00000000446	TRUB1	86	96.026	ENSCCAG00000028842	TRUB1	100	89.205	Cebus_capucinus
ENSTSYG00000000446	TRUB1	100	92.023	ENSCATG00000033431	TRUB1	100	90.883	Cercocebus_atys
ENSTSYG00000000446	TRUB1	70	85.772	ENSCLAG00000008664	TRUB1	100	84.146	Chinchilla_lanigera
ENSTSYG00000000446	TRUB1	100	92.308	ENSCSAG00000004891	TRUB1	100	91.168	Chlorocebus_sabaeus
ENSTSYG00000000446	TRUB1	99	75.504	ENSCHOG00000011931	TRUB1	99	76.945	Choloepus_hoffmanni
ENSTSYG00000000446	TRUB1	77	78.676	ENSCPBG00000003051	TRUB1	94	78.676	Chrysemys_picta_bellii
ENSTSYG00000000446	TRUB1	100	92.308	ENSCANG00000029445	TRUB1	100	91.168	Colobus_angolensis_palliatus
ENSTSYG00000000446	TRUB1	72	87.795	ENSCGRG00001016772	-	90	79.125	Cricetulus_griseus_chok1gshd
ENSTSYG00000000446	TRUB1	80	79.643	ENSCGRG00001010322	-	79	79.252	Cricetulus_griseus_chok1gshd
ENSTSYG00000000446	TRUB1	80	88.929	ENSCGRG00000010806	Trub1	91	87.879	Cricetulus_griseus_crigri
ENSTSYG00000000446	TRUB1	73	61.719	ENSCSEG00000011261	trub1	97	56.146	Cynoglossus_semilaevis
ENSTSYG00000000446	TRUB1	74	64.341	ENSCVAG00000008791	trub1	79	64.341	Cyprinodon_variegatus
ENSTSYG00000000446	TRUB1	75	65.019	ENSDARG00000053805	trub1	90	65.019	Danio_rerio
ENSTSYG00000000446	TRUB1	97	83.529	ENSDNOG00000001069	TRUB1	99	81.766	Dasypus_novemcinctus
ENSTSYG00000000446	TRUB1	99	87.143	ENSDORG00000010431	Trub1	99	86.286	Dipodomys_ordii
ENSTSYG00000000446	TRUB1	64	88.028	ENSETEG00000009183	TRUB1	81	75.122	Echinops_telfairi
ENSTSYG00000000446	TRUB1	85	95.318	ENSEASG00005014739	TRUB1	99	92.000	Equus_asinus_asinus
ENSTSYG00000000446	TRUB1	85	95.318	ENSECAG00000007177	TRUB1	99	92.000	Equus_caballus
ENSTSYG00000000446	TRUB1	98	76.705	ENSEEUG00000013993	TRUB1	98	77.273	Erinaceus_europaeus
ENSTSYG00000000446	TRUB1	70	69.388	ENSELUG00000000502	trub1	86	69.388	Esox_lucius
ENSTSYG00000000446	TRUB1	96	90.774	ENSFCAG00000031927	TRUB1	99	91.404	Felis_catus
ENSTSYG00000000446	TRUB1	68	75.833	ENSFALG00000002232	TRUB1	92	75.833	Ficedula_albicollis
ENSTSYG00000000446	TRUB1	70	84.016	ENSFDAG00000008140	TRUB1	99	83.197	Fukomys_damarensis
ENSTSYG00000000446	TRUB1	70	65.714	ENSFHEG00000004016	trub1	84	65.714	Fundulus_heteroclitus
ENSTSYG00000000446	TRUB1	77	74.632	ENSGALG00000009091	TRUB1	96	74.632	Gallus_gallus
ENSTSYG00000000446	TRUB1	68	63.750	ENSGAFG00000009193	trub1	86	63.115	Gambusia_affinis
ENSTSYG00000000446	TRUB1	56	67.179	ENSGACG00000015387	trub1	96	67.179	Gasterosteus_aculeatus
ENSTSYG00000000446	TRUB1	82	77.003	ENSGAGG00000009758	TRUB1	81	77.465	Gopherus_agassizii
ENSTSYG00000000446	TRUB1	100	92.023	ENSGGOG00000004583	TRUB1	100	90.883	Gorilla_gorilla
ENSTSYG00000000446	TRUB1	72	66.270	ENSHBUG00000016787	trub1	91	66.270	Haplochromis_burtoni
ENSTSYG00000000446	TRUB1	99	84.571	ENSHGLG00000015314	TRUB1	99	84.000	Heterocephalus_glaber_female
ENSTSYG00000000446	TRUB1	70	82.927	ENSHGLG00100009183	TRUB1	100	82.520	Heterocephalus_glaber_male
ENSTSYG00000000446	TRUB1	70	66.939	ENSHCOG00000017877	trub1	89	66.939	Hippocampus_comes
ENSTSYG00000000446	TRUB1	79	64.493	ENSIPUG00000017559	trub1	97	64.493	Ictalurus_punctatus
ENSTSYG00000000446	TRUB1	86	93.688	ENSSTOG00000003641	TRUB1	99	86.571	Ictidomys_tridecemlineatus
ENSTSYG00000000446	TRUB1	99	83.143	ENSJJAG00000011800	Trub1	99	82.000	Jaculus_jaculus
ENSTSYG00000000446	TRUB1	72	64.981	ENSKMAG00000006232	trub1	92	64.981	Kryptolebias_marmoratus
ENSTSYG00000000446	TRUB1	76	63.158	ENSLBEG00000026722	trub1	92	63.158	Labrus_bergylta
ENSTSYG00000000446	TRUB1	79	72.464	ENSLACG00000014885	TRUB1	92	72.464	Latimeria_chalumnae
ENSTSYG00000000446	TRUB1	78	69.231	ENSLOCG00000012979	trub1	93	69.231	Lepisosteus_oculatus
ENSTSYG00000000446	TRUB1	100	77.654	ENSLAFG00000015452	TRUB1	100	77.374	Loxodonta_africana
ENSTSYG00000000446	TRUB1	100	92.023	ENSMFAG00000031767	TRUB1	100	90.883	Macaca_fascicularis
ENSTSYG00000000446	TRUB1	100	92.308	ENSMMUG00000001902	TRUB1	100	91.168	Macaca_mulatta
ENSTSYG00000000446	TRUB1	100	88.034	ENSMNEG00000044646	TRUB1	100	86.895	Macaca_nemestrina
ENSTSYG00000000446	TRUB1	100	92.308	ENSMLEG00000042655	TRUB1	100	91.168	Mandrillus_leucophaeus
ENSTSYG00000000446	TRUB1	72	66.270	ENSMZEG00005024095	trub1	91	66.270	Maylandia_zebra
ENSTSYG00000000446	TRUB1	77	73.529	ENSMGAG00000011135	TRUB1	93	73.529	Meleagris_gallopavo
ENSTSYG00000000446	TRUB1	85	85.235	ENSMAUG00000011101	Trub1	89	85.333	Mesocricetus_auratus
ENSTSYG00000000446	TRUB1	99	91.429	ENSMICG00000016324	TRUB1	99	92.000	Microcebus_murinus
ENSTSYG00000000446	TRUB1	86	87.043	ENSMOCG00000017759	Trub1	91	87.043	Microtus_ochrogaster
ENSTSYG00000000446	TRUB1	81	82.517	ENSMODG00000009676	TRUB1	81	80.743	Monodelphis_domestica
ENSTSYG00000000446	TRUB1	99	80.000	MGP_CAROLIEiJ_G0023100	Trub1	89	86.047	Mus_caroli
ENSTSYG00000000446	TRUB1	99	78.857	ENSMUSG00000025086	Trub1	89	85.050	Mus_musculus
ENSTSYG00000000446	TRUB1	99	80.571	MGP_PahariEiJ_G0014588	Trub1	89	86.379	Mus_pahari
ENSTSYG00000000446	TRUB1	99	79.143	MGP_SPRETEiJ_G0024021	Trub1	89	85.382	Mus_spretus
ENSTSYG00000000446	TRUB1	86	96.346	ENSMPUG00000003556	TRUB1	99	92.571	Mustela_putorius_furo
ENSTSYG00000000446	TRUB1	96	86.607	ENSMLUG00000017686	TRUB1	100	84.375	Myotis_lucifugus
ENSTSYG00000000446	TRUB1	99	83.714	ENSNGAG00000018682	Trub1	86	91.030	Nannospalax_galili
ENSTSYG00000000446	TRUB1	70	67.480	ENSNBRG00000023393	trub1	88	67.480	Neolamprologus_brichardi
ENSTSYG00000000446	TRUB1	96	92.308	ENSNLEG00000016345	TRUB1	100	90.598	Nomascus_leucogenys
ENSTSYG00000000446	TRUB1	57	90.050	ENSMEUG00000006603	TRUB1	78	87.204	Notamacropus_eugenii
ENSTSYG00000000446	TRUB1	86	86.379	ENSOPRG00000009371	TRUB1	88	86.379	Ochotona_princeps
ENSTSYG00000000446	TRUB1	99	83.714	ENSODEG00000010854	TRUB1	99	82.286	Octodon_degus
ENSTSYG00000000446	TRUB1	70	67.073	ENSONIG00000007249	trub1	89	67.073	Oreochromis_niloticus
ENSTSYG00000000446	TRUB1	78	79.562	ENSOANG00000001556	TRUB1	93	77.385	Ornithorhynchus_anatinus
ENSTSYG00000000446	TRUB1	86	88.372	ENSOCUG00000009456	TRUB1	87	88.372	Oryctolagus_cuniculus
ENSTSYG00000000446	TRUB1	69	68.465	ENSORLG00000029719	trub1	86	68.465	Oryzias_latipes
ENSTSYG00000000446	TRUB1	69	68.050	ENSORLG00020016767	trub1	85	68.050	Oryzias_latipes_hni
ENSTSYG00000000446	TRUB1	69	68.880	ENSORLG00015014728	trub1	86	68.880	Oryzias_latipes_hsok
ENSTSYG00000000446	TRUB1	75	64.122	ENSOMEG00000014556	trub1	90	64.591	Oryzias_melastigma
ENSTSYG00000000446	TRUB1	99	91.429	ENSOGAG00000015895	TRUB1	99	92.571	Otolemur_garnettii
ENSTSYG00000000446	TRUB1	84	93.377	ENSOARG00000015591	TRUB1	99	86.555	Ovis_aries
ENSTSYG00000000446	TRUB1	100	91.738	ENSPPAG00000043645	TRUB1	100	90.598	Pan_paniscus
ENSTSYG00000000446	TRUB1	85	94.667	ENSPPRG00000007096	TRUB1	99	90.831	Panthera_pardus
ENSTSYG00000000446	TRUB1	85	95.000	ENSPTIG00000006378	TRUB1	99	91.117	Panthera_tigris_altaica
ENSTSYG00000000446	TRUB1	100	91.738	ENSPTRG00000002964	TRUB1	100	90.598	Pan_troglodytes
ENSTSYG00000000446	TRUB1	100	92.593	ENSPANG00000020712	TRUB1	100	91.453	Papio_anubis
ENSTSYG00000000446	TRUB1	77	76.471	ENSPSIG00000012877	TRUB1	93	76.471	Pelodiscus_sinensis
ENSTSYG00000000446	TRUB1	70	65.714	ENSPMGG00000000075	trub1	88	65.714	Periophthalmus_magnuspinnatus
ENSTSYG00000000446	TRUB1	85	85.333	ENSPEMG00000011156	Trub1	88	85.333	Peromyscus_maniculatus_bairdii
ENSTSYG00000000446	TRUB1	81	81.818	ENSPCIG00000009729	TRUB1	79	80.822	Phascolarctos_cinereus
ENSTSYG00000000446	TRUB1	70	64.898	ENSPFOG00000009950	trub1	90	64.898	Poecilia_formosa
ENSTSYG00000000446	TRUB1	70	64.898	ENSPLAG00000013855	trub1	86	64.898	Poecilia_latipinna
ENSTSYG00000000446	TRUB1	70	64.898	ENSPMEG00000009064	trub1	88	64.898	Poecilia_mexicana
ENSTSYG00000000446	TRUB1	70	66.122	ENSPREG00000003343	trub1	88	66.122	Poecilia_reticulata
ENSTSYG00000000446	TRUB1	96	92.012	ENSPPYG00000002676	TRUB1	100	90.598	Pongo_abelii
ENSTSYG00000000446	TRUB1	100	73.729	ENSPCAG00000008427	TRUB1	100	74.011	Procavia_capensis
ENSTSYG00000000446	TRUB1	99	84.615	ENSPCOG00000024360	TRUB1	99	84.046	Propithecus_coquereli
ENSTSYG00000000446	TRUB1	75	90.189	ENSPVAG00000007575	TRUB1	100	90.943	Pteropus_vampyrus
ENSTSYG00000000446	TRUB1	72	66.270	ENSPNYG00000018614	trub1	91	66.270	Pundamilia_nyererei
ENSTSYG00000000446	TRUB1	77	56.618	ENSPNAG00000006881	trub1	88	56.618	Pygocentrus_nattereri
ENSTSYG00000000446	TRUB1	99	80.857	ENSRNOG00000017321	Trub1	88	86.711	Rattus_norvegicus
ENSTSYG00000000446	TRUB1	100	82.336	ENSRBIG00000033423	TRUB1	100	81.197	Rhinopithecus_bieti
ENSTSYG00000000446	TRUB1	100	91.738	ENSRROG00000033902	TRUB1	100	90.598	Rhinopithecus_roxellana
ENSTSYG00000000446	TRUB1	96	92.308	ENSSBOG00000024237	TRUB1	100	89.773	Saimiri_boliviensis_boliviensis
ENSTSYG00000000446	TRUB1	72	80.859	ENSSHAG00000009346	TRUB1	86	80.859	Sarcophilus_harrisii
ENSTSYG00000000446	TRUB1	69	69.547	ENSSFOG00015022124	trub1	83	69.547	Scleropages_formosus
ENSTSYG00000000446	TRUB1	70	67.480	ENSSMAG00000001020	trub1	88	67.480	Scophthalmus_maximus
ENSTSYG00000000446	TRUB1	68	67.917	ENSSDUG00000016414	trub1	88	67.480	Seriola_dumerili
ENSTSYG00000000446	TRUB1	68	68.333	ENSSLDG00000015486	trub1	88	67.886	Seriola_lalandi_dorsalis
ENSTSYG00000000446	TRUB1	80	77.500	ENSSPUG00000001642	TRUB1	96	77.500	Sphenodon_punctatus
ENSTSYG00000000446	TRUB1	75	66.540	ENSSPAG00000001217	trub1	94	66.540	Stegastes_partitus
ENSTSYG00000000446	TRUB1	99	84.857	ENSSSCG00000010653	TRUB1	99	86.286	Sus_scrofa
ENSTSYG00000000446	TRUB1	77	75.000	ENSTGUG00000010971	TRUB1	97	74.818	Taeniopygia_guttata
ENSTSYG00000000446	TRUB1	72	77.075	ENSTBEG00000002880	TRUB1	99	77.075	Tupaia_belangeri
ENSTSYG00000000446	TRUB1	62	94.907	ENSTTRG00000005767	TRUB1	100	88.679	Tursiops_truncatus
ENSTSYG00000000446	TRUB1	86	96.678	ENSUAMG00000024876	TRUB1	99	92.286	Ursus_americanus
ENSTSYG00000000446	TRUB1	84	96.271	ENSUMAG00000002411	TRUB1	99	88.286	Ursus_maritimus
ENSTSYG00000000446	TRUB1	99	90.000	ENSVPAG00000005507	TRUB1	99	91.143	Vicugna_pacos
ENSTSYG00000000446	TRUB1	99	90.571	ENSVVUG00000010085	TRUB1	83	91.429	Vulpes_vulpes
ENSTSYG00000000446	TRUB1	77	66.176	ENSXETG00000023828	trub1	98	66.176	Xenopus_tropicalis
ENSTSYG00000000446	TRUB1	68	64.435	ENSXCOG00000017847	trub1	86	63.786	Xiphophorus_couchianus
ENSTSYG00000000446	TRUB1	70	64.082	ENSXMAG00000014701	trub1	88	64.082	Xiphophorus_maculatus