EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000000509 (Gene tree)
Gene ID: 103264519
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 13560 bases
Position: chrKE941337.1:207516-221075
Accession: 103264519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000029011	MBD	PF01429.19	2.6e-16	1	1
ENSTSYP00000000470	MBD	PF01429.19	2.7e-16	1	1
ENSTSYP00000020367	MBD	PF01429.19	2.8e-16	1	1
ENSTSYP00000017602	MBD	PF01429.19	3.1e-16	1	1
ENSTSYP00000024548	MBD	PF01429.19	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000036238	MBD1-204	1893	XM_008062199	ENSTSYP00000017602	630 (aa)	-	UPI000C2F737D
ENSTSYT00000027665	MBD1-201	1713	-	ENSTSYP00000029011	570 (aa)	-	UPI000C2F681D
ENSTSYT00000000509	MBD1-205	1701	-	ENSTSYP00000000470	566 (aa)	-	UPI000C2F65C8
ENSTSYT00000046756	MBD1-203	1761	-	ENSTSYP00000020367	586 (aa)	-	UPI000C2F46FB
ENSTSYT00000040931	MBD1-202	1968	XM_008062198	ENSTSYP00000024548	655 (aa)	-	UPI000C2F43AB

Gene Model

Click here to download ENSTSYG00000000509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000000509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000000509	MBD1	100	91.145	ENSG00000141644	MBD1	100	91.145	Homo_sapiens
ENSTSYG00000000509	MBD1	100	85.918	ENSAMEG00000000238	MBD1	96	86.392	Ailuropoda_melanoleuca
ENSTSYG00000000509	MBD1	65	45.169	ENSACAG00000006091	-	100	44.059	Anolis_carolinensis
ENSTSYG00000000509	MBD1	100	90.382	ENSANAG00000036253	MBD1	100	90.382	Aotus_nancymaae
ENSTSYG00000000509	MBD1	100	85.578	ENSBTAG00000003801	MBD1	100	85.737	Bos_taurus
ENSTSYG00000000509	MBD1	100	90.076	ENSCJAG00000004959	MBD1	100	90.076	Callithrix_jacchus
ENSTSYG00000000509	MBD1	100	85.895	ENSCAFG00000018928	MBD1	96	86.688	Canis_familiaris
ENSTSYG00000000509	MBD1	99	85.233	ENSCAFG00020024272	MBD1	97	86.035	Canis_lupus_dingo
ENSTSYG00000000509	MBD1	100	85.578	ENSCHIG00000021134	MBD1	100	85.737	Capra_hircus
ENSTSYG00000000509	MBD1	99	66.608	ENSCAPG00000015782	MBD1	98	65.138	Cavia_aperea
ENSTSYG00000000509	MBD1	100	67.756	ENSCPOG00000001671	MBD1	98	71.210	Cavia_porcellus
ENSTSYG00000000509	MBD1	100	88.415	ENSCCAG00000034600	MBD1	100	88.397	Cebus_capucinus
ENSTSYG00000000509	MBD1	100	91.111	ENSCATG00000029959	MBD1	100	91.111	Cercocebus_atys
ENSTSYG00000000509	MBD1	100	83.968	ENSCLAG00000007457	MBD1	89	83.968	Chinchilla_lanigera
ENSTSYG00000000509	MBD1	100	87.778	ENSCSAG00000018070	MBD1	98	91.385	Chlorocebus_sabaeus
ENSTSYG00000000509	MBD1	100	90.952	ENSCANG00000033425	MBD1	100	90.952	Colobus_angolensis_palliatus
ENSTSYG00000000509	MBD1	100	70.032	ENSCGRG00001014843	Mbd1	98	72.987	Cricetulus_griseus_chok1gshd
ENSTSYG00000000509	MBD1	99	60.141	ENSCGRG00000014135	Mbd1	96	59.965	Cricetulus_griseus_crigri
ENSTSYG00000000509	MBD1	100	79.239	ENSDNOG00000015998	MBD1	100	81.458	Dasypus_novemcinctus
ENSTSYG00000000509	MBD1	99	72.085	ENSDORG00000013917	Mbd1	98	76.829	Dipodomys_ordii
ENSTSYG00000000509	MBD1	100	87.184	ENSEASG00005003857	MBD1	100	85.692	Equus_asinus_asinus
ENSTSYG00000000509	MBD1	99	86.699	ENSECAG00000011497	MBD1	79	85.619	Equus_caballus
ENSTSYG00000000509	MBD1	100	87.658	ENSFCAG00000015730	MBD1	100	88.133	Felis_catus
ENSTSYG00000000509	MBD1	99	79.144	ENSFDAG00000011085	MBD1	96	77.540	Fukomys_damarensis
ENSTSYG00000000509	MBD1	61	32.514	ENSGACG00000012106	-	58	33.053	Gasterosteus_aculeatus
ENSTSYG00000000509	MBD1	100	90.952	ENSGGOG00000016966	MBD1	100	90.952	Gorilla_gorilla
ENSTSYG00000000509	MBD1	100	83.810	ENSHGLG00000008740	MBD1	100	83.810	Heterocephalus_glaber_female
ENSTSYG00000000509	MBD1	93	85.350	ENSHGLG00100005198	MBD1	98	87.833	Heterocephalus_glaber_male
ENSTSYG00000000509	MBD1	58	37.989	ENSIPUG00000015243	-	50	56.923	Ictalurus_punctatus
ENSTSYG00000000509	MBD1	100	79.375	ENSSTOG00000007780	MBD1	98	82.392	Ictidomys_tridecemlineatus
ENSTSYG00000000509	MBD1	98	72.340	ENSJJAG00000022859	Mbd1	96	72.340	Jaculus_jaculus
ENSTSYG00000000509	MBD1	87	35.917	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSTSYG00000000509	MBD1	99	71.019	ENSLAFG00000031328	MBD1	98	74.141	Loxodonta_africana
ENSTSYG00000000509	MBD1	100	90.794	ENSMFAG00000026335	MBD1	100	90.794	Macaca_fascicularis
ENSTSYG00000000509	MBD1	100	90.794	ENSMMUG00000009050	MBD1	100	90.794	Macaca_mulatta
ENSTSYG00000000509	MBD1	100	90.794	ENSMNEG00000038822	MBD1	100	90.794	Macaca_nemestrina
ENSTSYG00000000509	MBD1	100	91.111	ENSMLEG00000043121	MBD1	100	91.111	Mandrillus_leucophaeus
ENSTSYG00000000509	MBD1	99	87.905	ENSMICG00000006414	MBD1	100	87.905	Microcebus_murinus
ENSTSYG00000000509	MBD1	60	42.268	ENSMODG00000001286	-	58	44.501	Monodelphis_domestica
ENSTSYG00000000509	MBD1	99	63.761	ENSMUSG00000024561	Mbd1	98	66.038	Mus_musculus
ENSTSYG00000000509	MBD1	100	64.832	MGP_PahariEiJ_G0019128	Mbd1	98	67.532	Mus_pahari
ENSTSYG00000000509	MBD1	98	64.953	MGP_SPRETEiJ_G0023304	Mbd1	99	67.805	Mus_spretus
ENSTSYG00000000509	MBD1	100	85.601	ENSMPUG00000008843	MBD1	96	86.076	Mustela_putorius_furo
ENSTSYG00000000509	MBD1	100	84.762	ENSMLUG00000008286	MBD1	96	84.762	Myotis_lucifugus
ENSTSYG00000000509	MBD1	98	71.304	ENSNGAG00000011412	Mbd1	96	71.304	Nannospalax_galili
ENSTSYG00000000509	MBD1	100	90.476	ENSNLEG00000011661	-	100	90.476	Nomascus_leucogenys
ENSTSYG00000000509	MBD1	100	76.109	ENSNLEG00000032711	-	100	75.427	Nomascus_leucogenys
ENSTSYG00000000509	MBD1	100	71.111	ENSOPRG00000007647	MBD1	98	73.649	Ochotona_princeps
ENSTSYG00000000509	MBD1	99	75.088	ENSODEG00000018451	MBD1	96	80.189	Octodon_degus
ENSTSYG00000000509	MBD1	85	46.583	ENSOANG00000014593	-	100	47.338	Ornithorhynchus_anatinus
ENSTSYG00000000509	MBD1	100	83.518	ENSOCUG00000006554	MBD1	100	83.994	Oryctolagus_cuniculus
ENSTSYG00000000509	MBD1	100	85.781	ENSOGAG00000003784	MBD1	96	85.781	Otolemur_garnettii
ENSTSYG00000000509	MBD1	100	85.285	ENSOARG00000004218	MBD1	95	85.443	Ovis_aries
ENSTSYG00000000509	MBD1	100	90.840	ENSPPAG00000038886	MBD1	100	90.840	Pan_paniscus
ENSTSYG00000000509	MBD1	100	87.816	ENSPPRG00000021387	MBD1	100	88.291	Panthera_pardus
ENSTSYG00000000509	MBD1	100	87.658	ENSPTIG00000021231	MBD1	100	88.133	Panthera_tigris_altaica
ENSTSYG00000000509	MBD1	100	90.952	ENSPTRG00000010021	MBD1	100	90.952	Pan_troglodytes
ENSTSYG00000000509	MBD1	100	91.145	ENSPANG00000010867	MBD1	100	91.145	Papio_anubis
ENSTSYG00000000509	MBD1	99	61.945	ENSPEMG00000022630	Mbd1	97	62.051	Peromyscus_maniculatus_bairdii
ENSTSYG00000000509	MBD1	96	46.614	ENSPCIG00000027937	-	84	44.463	Phascolarctos_cinereus
ENSTSYG00000000509	MBD1	100	87.460	ENSPPYG00000009158	MBD1	89	91.047	Pongo_abelii
ENSTSYG00000000509	MBD1	85	84.848	ENSPCAG00000001648	MBD1	93	84.733	Procavia_capensis
ENSTSYG00000000509	MBD1	99	89.924	ENSPCOG00000012450	MBD1	99	89.924	Propithecus_coquereli
ENSTSYG00000000509	MBD1	99	51.536	ENSRNOG00000024104	Mbd1	98	58.551	Rattus_norvegicus
ENSTSYG00000000509	MBD1	97	89.292	ENSRBIG00000041294	MBD1	98	90.257	Rhinopithecus_bieti
ENSTSYG00000000509	MBD1	100	91.111	ENSRROG00000032517	MBD1	100	91.111	Rhinopithecus_roxellana
ENSTSYG00000000509	MBD1	100	89.924	ENSSBOG00000027169	MBD1	100	89.924	Saimiri_boliviensis_boliviensis
ENSTSYG00000000509	MBD1	77	45.325	ENSSHAG00000003661	-	100	47.323	Sarcophilus_harrisii
ENSTSYG00000000509	MBD1	61	30.147	ENSSPAG00000021447	mbd1b	51	38.235	Stegastes_partitus
ENSTSYG00000000509	MBD1	99	83.601	ENSSSCG00000004516	MBD1	98	86.233	Sus_scrofa
ENSTSYG00000000509	MBD1	65	32.432	ENSTRUG00000013422	mbd1b	50	30.830	Takifugu_rubripes
ENSTSYG00000000509	MBD1	71	84.052	ENSTBEG00000012651	-	68	83.750	Tupaia_belangeri
ENSTSYG00000000509	MBD1	100	79.430	ENSTTRG00000015523	MBD1	98	84.343	Tursiops_truncatus
ENSTSYG00000000509	MBD1	99	80.899	ENSUAMG00000004752	MBD1	98	82.155	Ursus_americanus
ENSTSYG00000000509	MBD1	98	85.945	ENSUMAG00000002947	MBD1	98	86.532	Ursus_maritimus