EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000000544 (Gene tree)
Gene ID: 103268350
Gene Symbol: PRDM10
Alias: -
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 57379 bases
Position: chrKE944011.1:145690-203068
Accession: 103268350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000017469	zf-C2H2	PF00096.26	1.9e-33	1	5
ENSTSYP00000017469	zf-C2H2	PF00096.26	1.9e-33	2	5
ENSTSYP00000017469	zf-C2H2	PF00096.26	1.9e-33	3	5
ENSTSYP00000017469	zf-C2H2	PF00096.26	1.9e-33	4	5
ENSTSYP00000017469	zf-C2H2	PF00096.26	1.9e-33	5	5
ENSTSYP00000022081	zf-C2H2	PF00096.26	6.3e-33	1	5
ENSTSYP00000022081	zf-C2H2	PF00096.26	6.3e-33	2	5
ENSTSYP00000022081	zf-C2H2	PF00096.26	6.3e-33	3	5
ENSTSYP00000022081	zf-C2H2	PF00096.26	6.3e-33	4	5
ENSTSYP00000022081	zf-C2H2	PF00096.26	6.3e-33	5	5
ENSTSYP00000000502	zf-C2H2	PF00096.26	7.6e-33	1	5
ENSTSYP00000000502	zf-C2H2	PF00096.26	7.6e-33	2	5
ENSTSYP00000000502	zf-C2H2	PF00096.26	7.6e-33	3	5
ENSTSYP00000000502	zf-C2H2	PF00096.26	7.6e-33	4	5
ENSTSYP00000000502	zf-C2H2	PF00096.26	7.6e-33	5	5
ENSTSYP00000027566	zf-C2H2	PF00096.26	8e-33	1	5
ENSTSYP00000027566	zf-C2H2	PF00096.26	8e-33	2	5
ENSTSYP00000027566	zf-C2H2	PF00096.26	8e-33	3	5
ENSTSYP00000027566	zf-C2H2	PF00096.26	8e-33	4	5
ENSTSYP00000027566	zf-C2H2	PF00096.26	8e-33	5	5
ENSTSYP00000017469	zf-met	PF12874.7	6.8e-06	1	2
ENSTSYP00000017469	zf-met	PF12874.7	6.8e-06	2	2
ENSTSYP00000022081	zf-met	PF12874.7	9.7e-06	1	2
ENSTSYP00000022081	zf-met	PF12874.7	9.7e-06	2	2
ENSTSYP00000000502	zf-met	PF12874.7	1e-05	1	2
ENSTSYP00000000502	zf-met	PF12874.7	1e-05	2	2
ENSTSYP00000027566	zf-met	PF12874.7	1e-05	1	2
ENSTSYP00000027566	zf-met	PF12874.7	1e-05	2	2
ENSTSYP00000017469	zf-C2H2_jaz	PF12171.8	2.1e-17	1	1
ENSTSYP00000022081	zf-C2H2_jaz	PF12171.8	6.1e-17	1	1
ENSTSYP00000000502	zf-C2H2_jaz	PF12171.8	7.4e-17	1	1
ENSTSYP00000027566	zf-C2H2_jaz	PF12171.8	7.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000044842	PRDM10-204	3066	-	ENSTSYP00000017469	1021 (aa)	-	UPI000C2F57B3
ENSTSYT00000032974	PRDM10-203	3420	-	ENSTSYP00000022081	1139 (aa)	-	UPI000C2F528D
ENSTSYT00000047995	PRDM10-201	3483	XM_008065907	ENSTSYP00000027566	1160 (aa)	XP_008064098	A0A1U7U5T5
ENSTSYT00000000544	PRDM10-202	3471	XM_008065908	ENSTSYP00000000502	1156 (aa)	XP_008064099	A0A1U7TVS1

Gene Model

Click here to download ENSTSYG00000000544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000000544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000000544	PRDM10	51	39.091	ENSTSYG00000011542	PRDM15	66	39.091
ENSTSYG00000000544	PRDM10	56	36.306	ENSTSYG00000009630	PRDM5	86	36.306
ENSTSYG00000000544	PRDM10	53	35.374	ENSTSYG00000009248	PRDM4	52	35.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000000544	PRDM10	100	98.139	ENSG00000170325	PRDM10	100	98.103	Homo_sapiens
ENSTSYG00000000544	PRDM10	100	92.237	ENSAMEG00000002425	PRDM10	100	92.237	Ailuropoda_melanoleuca
ENSTSYG00000000544	PRDM10	100	85.284	ENSAPLG00000004858	PRDM10	100	85.370	Anas_platyrhynchos
ENSTSYG00000000544	PRDM10	100	89.253	ENSANAG00000022064	PRDM10	100	82.847	Aotus_nancymaae
ENSTSYG00000000544	PRDM10	100	94.224	ENSBTAG00000019001	PRDM10	100	94.510	Bos_taurus
ENSTSYG00000000544	PRDM10	100	97.747	ENSCJAG00000009235	PRDM10	100	97.500	Callithrix_jacchus
ENSTSYG00000000544	PRDM10	100	94.031	ENSCAFG00000010164	PRDM10	100	94.031	Canis_familiaris
ENSTSYG00000000544	PRDM10	100	92.863	ENSCAFG00020010152	PRDM10	100	92.863	Canis_lupus_dingo
ENSTSYG00000000544	PRDM10	100	94.550	ENSCHIG00000026530	PRDM10	100	94.031	Capra_hircus
ENSTSYG00000000544	PRDM10	100	86.313	ENSCAPG00000017296	PRDM10	98	88.543	Cavia_aperea
ENSTSYG00000000544	PRDM10	94	87.030	ENSCPOG00000000389	PRDM10	98	86.931	Cavia_porcellus
ENSTSYG00000000544	PRDM10	100	97.845	ENSCCAG00000024567	PRDM10	100	97.500	Cebus_capucinus
ENSTSYG00000000544	PRDM10	100	98.139	ENSCATG00000040031	PRDM10	100	98.097	Cercocebus_atys
ENSTSYG00000000544	PRDM10	100	92.545	ENSCLAG00000014605	PRDM10	99	97.403	Chinchilla_lanigera
ENSTSYG00000000544	PRDM10	100	98.183	ENSCSAG00000002202	PRDM10	100	98.183	Chlorocebus_sabaeus
ENSTSYG00000000544	PRDM10	100	83.028	ENSCPBG00000026880	PRDM10	99	82.670	Chrysemys_picta_bellii
ENSTSYG00000000544	PRDM10	100	98.139	ENSCANG00000032669	PRDM10	100	98.017	Colobus_angolensis_palliatus
ENSTSYG00000000544	PRDM10	100	93.270	ENSCGRG00001021647	Prdm10	98	93.184	Cricetulus_griseus_chok1gshd
ENSTSYG00000000544	PRDM10	100	93.270	ENSCGRG00000006562	Prdm10	98	93.184	Cricetulus_griseus_crigri
ENSTSYG00000000544	PRDM10	86	91.901	ENSDNOG00000001366	PRDM10	95	94.304	Dasypus_novemcinctus
ENSTSYG00000000544	PRDM10	100	95.242	ENSDORG00000014292	Prdm10	100	95.242	Dipodomys_ordii
ENSTSYG00000000544	PRDM10	100	96.280	ENSEASG00005022914	PRDM10	100	96.280	Equus_asinus_asinus
ENSTSYG00000000544	PRDM10	100	96.194	ENSECAG00000011499	PRDM10	100	96.194	Equus_caballus
ENSTSYG00000000544	PRDM10	98	95.326	ENSFCAG00000004111	PRDM10	96	95.326	Felis_catus
ENSTSYG00000000544	PRDM10	100	81.417	ENSFALG00000004873	PRDM10	100	81.250	Ficedula_albicollis
ENSTSYG00000000544	PRDM10	100	92.809	ENSFDAG00000017311	PRDM10	100	92.555	Fukomys_damarensis
ENSTSYG00000000544	PRDM10	100	82.446	ENSGALG00000033660	PRDM10	99	85.676	Gallus_gallus
ENSTSYG00000000544	PRDM10	92	67.901	ENSGACG00000012293	prdm10	99	67.901	Gasterosteus_aculeatus
ENSTSYG00000000544	PRDM10	100	84.233	ENSGAGG00000012523	PRDM10	99	84.147	Gopherus_agassizii
ENSTSYG00000000544	PRDM10	100	98.434	ENSGGOG00000015359	PRDM10	100	98.363	Gorilla_gorilla
ENSTSYG00000000544	PRDM10	100	92.845	ENSHGLG00000001106	PRDM10	100	93.015	Heterocephalus_glaber_female
ENSTSYG00000000544	PRDM10	100	93.259	ENSHGLG00100002350	PRDM10	100	93.345	Heterocephalus_glaber_male
ENSTSYG00000000544	PRDM10	100	97.405	ENSSTOG00000002015	PRDM10	100	97.405	Ictidomys_tridecemlineatus
ENSTSYG00000000544	PRDM10	98	88.160	ENSJJAG00000021493	Prdm10	90	92.695	Jaculus_jaculus
ENSTSYG00000000544	PRDM10	100	92.605	ENSLAFG00000031867	PRDM10	100	92.519	Loxodonta_africana
ENSTSYG00000000544	PRDM10	100	98.237	ENSMFAG00000031008	PRDM10	100	98.190	Macaca_fascicularis
ENSTSYG00000000544	PRDM10	100	98.237	ENSMMUG00000017555	PRDM10	100	98.190	Macaca_mulatta
ENSTSYG00000000544	PRDM10	100	98.139	ENSMNEG00000036493	PRDM10	100	98.103	Macaca_nemestrina
ENSTSYG00000000544	PRDM10	94	98.039	ENSMLEG00000042028	PRDM10	100	98.039	Mandrillus_leucophaeus
ENSTSYG00000000544	PRDM10	100	82.736	ENSMGAG00000001112	PRDM10	100	82.569	Meleagris_gallopavo
ENSTSYG00000000544	PRDM10	100	97.241	ENSMICG00000013888	PRDM10	100	97.241	Microcebus_murinus
ENSTSYG00000000544	PRDM10	100	91.976	ENSMOCG00000021853	Prdm10	99	95.890	Microtus_ochrogaster
ENSTSYG00000000544	PRDM10	76	88.801	ENSMODG00000004979	PRDM10	99	88.462	Monodelphis_domestica
ENSTSYG00000000544	PRDM10	100	91.723	ENSMUSG00000042496	Prdm10	100	91.639	Mus_musculus
ENSTSYG00000000544	PRDM10	100	93.632	MGP_SPRETEiJ_G0033061	-	100	93.546	Mus_spretus
ENSTSYG00000000544	PRDM10	100	96.021	ENSMPUG00000008711	PRDM10	99	96.021	Mustela_putorius_furo
ENSTSYG00000000544	PRDM10	100	94.138	ENSMLUG00000013051	PRDM10	100	94.138	Myotis_lucifugus
ENSTSYG00000000544	PRDM10	100	96.107	ENSNGAG00000000580	Prdm10	99	97.264	Nannospalax_galili
ENSTSYG00000000544	PRDM10	100	98.041	ENSNLEG00000007488	PRDM10	100	97.931	Nomascus_leucogenys
ENSTSYG00000000544	PRDM10	100	91.610	ENSODEG00000005309	PRDM10	99	94.805	Octodon_degus
ENSTSYG00000000544	PRDM10	100	80.936	ENSOANG00000000577	-	100	79.915	Ornithorhynchus_anatinus
ENSTSYG00000000544	PRDM10	100	94.896	ENSOCUG00000003736	PRDM10	100	94.810	Oryctolagus_cuniculus
ENSTSYG00000000544	PRDM10	100	95.948	ENSOGAG00000010723	PRDM10	100	95.862	Otolemur_garnettii
ENSTSYG00000000544	PRDM10	100	94.464	ENSOARG00000014507	PRDM10	100	93.945	Ovis_aries
ENSTSYG00000000544	PRDM10	100	98.337	ENSPPAG00000042881	PRDM10	100	98.191	Pan_paniscus
ENSTSYG00000000544	PRDM10	100	95.172	ENSPPRG00000007002	PRDM10	100	95.172	Panthera_pardus
ENSTSYG00000000544	PRDM10	100	95.259	ENSPTIG00000013331	PRDM10	100	95.259	Panthera_tigris_altaica
ENSTSYG00000000544	PRDM10	100	98.337	ENSPTRG00000004477	PRDM10	100	98.191	Pan_troglodytes
ENSTSYG00000000544	PRDM10	100	98.139	ENSPANG00000017470	PRDM10	100	98.103	Papio_anubis
ENSTSYG00000000544	PRDM10	100	92.438	ENSPEMG00000014985	Prdm10	100	92.099	Peromyscus_maniculatus_bairdii
ENSTSYG00000000544	PRDM10	100	98.356	ENSPPYG00000004061	PRDM10	100	98.356	Pongo_abelii
ENSTSYG00000000544	PRDM10	92	86.461	ENSPCAG00000014514	PRDM10	100	86.461	Procavia_capensis
ENSTSYG00000000544	PRDM10	100	82.504	ENSPCOG00000023406	PRDM10	100	83.319	Propithecus_coquereli
ENSTSYG00000000544	PRDM10	100	96.121	ENSPVAG00000012764	PRDM10	100	96.121	Pteropus_vampyrus
ENSTSYG00000000544	PRDM10	100	93.782	ENSRNOG00000007853	Prdm10	100	93.696	Rattus_norvegicus
ENSTSYG00000000544	PRDM10	100	98.237	ENSRBIG00000030924	PRDM10	100	98.190	Rhinopithecus_bieti
ENSTSYG00000000544	PRDM10	100	98.237	ENSRROG00000034334	PRDM10	100	98.190	Rhinopithecus_roxellana
ENSTSYG00000000544	PRDM10	100	97.747	ENSSBOG00000008773	PRDM10	100	97.500	Saimiri_boliviensis_boliviensis
ENSTSYG00000000544	PRDM10	99	88.306	ENSSHAG00000004503	PRDM10	99	88.134	Sarcophilus_harrisii
ENSTSYG00000000544	PRDM10	67	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSTSYG00000000544	PRDM10	100	81.803	ENSSPUG00000001178	PRDM10	97	85.487	Sphenodon_punctatus
ENSTSYG00000000544	PRDM10	100	93.621	ENSSSCG00000015243	PRDM10	100	93.880	Sus_scrofa
ENSTSYG00000000544	PRDM10	100	83.948	ENSTGUG00000000530	PRDM10	100	83.863	Taeniopygia_guttata
ENSTSYG00000000544	PRDM10	95	95.575	ENSTBEG00000007221	PRDM10	94	95.575	Tupaia_belangeri
ENSTSYG00000000544	PRDM10	100	92.155	ENSTTRG00000009189	PRDM10	100	91.638	Tursiops_truncatus
ENSTSYG00000000544	PRDM10	91	94.107	ENSUAMG00000018832	PRDM10	94	96.552	Ursus_americanus
ENSTSYG00000000544	PRDM10	100	93.590	ENSUMAG00000003167	PRDM10	99	96.223	Ursus_maritimus
ENSTSYG00000000544	PRDM10	100	95.069	ENSVVUG00000019878	PRDM10	100	95.069	Vulpes_vulpes
ENSTSYG00000000544	PRDM10	100	69.500	ENSXETG00000032173	PRDM10	100	69.500	Xenopus_tropicalis