EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000000935 (Gene tree)
Gene ID: 103267161
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 120382 bases
Position: chrKE943327.1:305721-426102
Accession: 103267161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000015331	Upf2	PF04050.14	4.6e-33	1	1
ENSTSYP00000024472	Upf2	PF04050.14	6.8e-33	1	1
ENSTSYP00000000866	Upf2	PF04050.14	9e-33	1	1
ENSTSYP00000024472	MIF4G	PF02854.19	1.3e-80	1	3
ENSTSYP00000024472	MIF4G	PF02854.19	1.3e-80	2	3
ENSTSYP00000024472	MIF4G	PF02854.19	1.3e-80	3	3
ENSTSYP00000000866	MIF4G	PF02854.19	1.4e-80	1	3
ENSTSYP00000000866	MIF4G	PF02854.19	1.4e-80	2	3
ENSTSYP00000000866	MIF4G	PF02854.19	1.4e-80	3	3
ENSTSYP00000015331	MIF4G	PF02854.19	1.5e-80	1	3
ENSTSYP00000015331	MIF4G	PF02854.19	1.5e-80	2	3
ENSTSYP00000015331	MIF4G	PF02854.19	1.5e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000000937	UPF2-202	3717	-	ENSTSYP00000000866	1238 (aa)	-	UPI000C2F5B65
ENSTSYT00000047690	UPF2-203	3690	-	ENSTSYP00000024472	1229 (aa)	-	UPI000C2F6E8D
ENSTSYT00000032563	UPF2-201	5238	XM_008064766	ENSTSYP00000015331	1271 (aa)	XP_008062957	A0A1U7UCH8

Gene Model

Click here to download ENSTSYG00000000935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000000935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000000935	UPF2	100	97.877	ENSG00000151461	UPF2	100	97.877	Homo_sapiens
ENSTSYG00000000935	UPF2	100	78.285	ENSAPOG00000015837	UPF2	100	78.686	Acanthochromis_polyacanthus
ENSTSYG00000000935	UPF2	100	97.482	ENSAMEG00000004586	UPF2	100	97.482	Ailuropoda_melanoleuca
ENSTSYG00000000935	UPF2	97	86.932	ENSACIG00000018078	UPF2	100	82.578	Amphilophus_citrinellus
ENSTSYG00000000935	UPF2	97	85.955	ENSAOCG00000016766	UPF2	100	82.761	Amphiprion_ocellaris
ENSTSYG00000000935	UPF2	97	85.955	ENSAPEG00000019084	UPF2	100	82.839	Amphiprion_percula
ENSTSYG00000000935	UPF2	97	86.667	ENSATEG00000021677	UPF2	99	82.710	Anabas_testudineus
ENSTSYG00000000935	UPF2	100	87.107	ENSAPLG00000010287	UPF2	100	86.399	Anas_platyrhynchos
ENSTSYG00000000935	UPF2	97	96.591	ENSACAG00000009259	UPF2	100	91.739	Anolis_carolinensis
ENSTSYG00000000935	UPF2	97	100.000	ENSANAG00000028451	UPF2	93	100.000	Aotus_nancymaae
ENSTSYG00000000935	UPF2	97	86.932	ENSACLG00000012696	UPF2	100	82.839	Astatotilapia_calliptera
ENSTSYG00000000935	UPF2	97	87.571	ENSAMXG00000013700	UPF2	99	83.255	Astyanax_mexicanus
ENSTSYG00000000935	UPF2	100	97.718	ENSBTAG00000000288	UPF2	100	97.718	Bos_taurus
ENSTSYG00000000935	UPF2	100	97.720	ENSCJAG00000020685	UPF2	100	97.720	Callithrix_jacchus
ENSTSYG00000000935	UPF2	100	97.561	ENSCAFG00000004839	UPF2	100	97.561	Canis_familiaris
ENSTSYG00000000935	UPF2	97	99.507	ENSCAFG00020005882	UPF2	100	99.482	Canis_lupus_dingo
ENSTSYG00000000935	UPF2	100	97.640	ENSCHIG00000020359	UPF2	100	97.640	Capra_hircus
ENSTSYG00000000935	UPF2	91	86.833	ENSCAPG00000016658	UPF2	100	85.866	Cavia_aperea
ENSTSYG00000000935	UPF2	96	100.000	ENSCPOG00000008809	UPF2	99	94.449	Cavia_porcellus
ENSTSYG00000000935	UPF2	97	100.000	ENSCCAG00000035991	UPF2	93	100.000	Cebus_capucinus
ENSTSYG00000000935	UPF2	100	98.035	ENSCATG00000032679	UPF2	100	98.035	Cercocebus_atys
ENSTSYG00000000935	UPF2	97	100.000	ENSCLAG00000011434	UPF2	100	96.932	Chinchilla_lanigera
ENSTSYG00000000935	UPF2	100	98.035	ENSCSAG00000013372	UPF2	100	98.035	Chlorocebus_sabaeus
ENSTSYG00000000935	UPF2	87	99.107	ENSCHOG00000000422	UPF2	89	99.107	Choloepus_hoffmanni
ENSTSYG00000000935	UPF2	97	98.295	ENSCPBG00000027823	UPF2	100	92.514	Chrysemys_picta_bellii
ENSTSYG00000000935	UPF2	79	48.865	ENSCSAVG00000007772	-	99	47.255	Ciona_savignyi
ENSTSYG00000000935	UPF2	100	92.716	ENSCANG00000040396	UPF2	100	92.716	Colobus_angolensis_palliatus
ENSTSYG00000000935	UPF2	100	97.168	ENSCGRG00001019347	Upf2	100	97.168	Cricetulus_griseus_chok1gshd
ENSTSYG00000000935	UPF2	100	97.168	ENSCGRG00000017993	Upf2	100	97.168	Cricetulus_griseus_crigri
ENSTSYG00000000935	UPF2	99	77.492	ENSCSEG00000003520	UPF2	99	77.520	Cynoglossus_semilaevis
ENSTSYG00000000935	UPF2	96	85.955	ENSCVAG00000006167	UPF2	100	82.168	Cyprinodon_variegatus
ENSTSYG00000000935	UPF2	100	97.325	ENSDNOG00000018160	UPF2	100	97.325	Dasypus_novemcinctus
ENSTSYG00000000935	UPF2	100	96.774	ENSDORG00000002478	Upf2	100	96.774	Dipodomys_ordii
ENSTSYG00000000935	UPF2	89	36.555	FBgn0029992	Upf2	95	36.175	Drosophila_melanogaster
ENSTSYG00000000935	UPF2	72	100.000	ENSETEG00000011583	-	67	100.000	Echinops_telfairi
ENSTSYG00000000935	UPF2	67	72.483	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSTSYG00000000935	UPF2	100	97.561	ENSEASG00005019274	UPF2	100	98.457	Equus_asinus_asinus
ENSTSYG00000000935	UPF2	100	97.640	ENSECAG00000017022	UPF2	100	97.640	Equus_caballus
ENSTSYG00000000935	UPF2	82	95.527	ENSEEUG00000007819	UPF2	82	95.527	Erinaceus_europaeus
ENSTSYG00000000935	UPF2	97	88.202	ENSELUG00000012014	UPF2	100	81.882	Esox_lucius
ENSTSYG00000000935	UPF2	100	99.448	ENSFCAG00000005785	UPF2	100	97.482	Felis_catus
ENSTSYG00000000935	UPF2	97	97.159	ENSFALG00000001889	UPF2	98	93.548	Ficedula_albicollis
ENSTSYG00000000935	UPF2	100	96.932	ENSFDAG00000014348	UPF2	100	96.932	Fukomys_damarensis
ENSTSYG00000000935	UPF2	99	82.639	ENSFHEG00000009826	UPF2	100	82.376	Fundulus_heteroclitus
ENSTSYG00000000935	UPF2	91	83.765	ENSGMOG00000005557	UPF2	100	80.328	Gadus_morhua
ENSTSYG00000000935	UPF2	97	97.159	ENSGALG00000033772	UPF2	100	93.396	Gallus_gallus
ENSTSYG00000000935	UPF2	97	85.876	ENSGAFG00000020867	UPF2	100	81.747	Gambusia_affinis
ENSTSYG00000000935	UPF2	90	84.211	ENSGACG00000001080	UPF2	100	82.344	Gasterosteus_aculeatus
ENSTSYG00000000935	UPF2	97	97.740	ENSGAGG00000002700	UPF2	100	93.076	Gopherus_agassizii
ENSTSYG00000000935	UPF2	100	97.799	ENSGGOG00000001479	UPF2	100	97.799	Gorilla_gorilla
ENSTSYG00000000935	UPF2	97	86.932	ENSHBUG00000004249	UPF2	100	82.812	Haplochromis_burtoni
ENSTSYG00000000935	UPF2	97	94.318	ENSHGLG00000003822	-	99	84.646	Heterocephalus_glaber_female
ENSTSYG00000000935	UPF2	97	100.000	ENSHGLG00000015176	-	100	96.932	Heterocephalus_glaber_female
ENSTSYG00000000935	UPF2	97	100.000	ENSHGLG00100010036	UPF2	100	93.459	Heterocephalus_glaber_male
ENSTSYG00000000935	UPF2	97	85.955	ENSHCOG00000004025	UPF2	99	80.886	Hippocampus_comes
ENSTSYG00000000935	UPF2	97	87.571	ENSIPUG00000015524	UPF2	100	82.123	Ictalurus_punctatus
ENSTSYG00000000935	UPF2	100	97.404	ENSSTOG00000013075	UPF2	100	97.404	Ictidomys_tridecemlineatus
ENSTSYG00000000935	UPF2	100	95.358	ENSJJAG00000004913	Upf2	100	95.358	Jaculus_jaculus
ENSTSYG00000000935	UPF2	92	84.596	ENSKMAG00000001071	UPF2	100	81.947	Kryptolebias_marmoratus
ENSTSYG00000000935	UPF2	84	80.843	ENSLBEG00000000728	-	95	81.034	Labrus_bergylta
ENSTSYG00000000935	UPF2	100	82.828	ENSLBEG00000016394	-	99	82.879	Labrus_bergylta
ENSTSYG00000000935	UPF2	97	88.947	ENSLACG00000015945	UPF2	94	92.265	Latimeria_chalumnae
ENSTSYG00000000935	UPF2	96	89.831	ENSLOCG00000015698	UPF2	100	86.052	Lepisosteus_oculatus
ENSTSYG00000000935	UPF2	100	98.035	ENSMFAG00000043865	UPF2	100	98.035	Macaca_fascicularis
ENSTSYG00000000935	UPF2	100	98.035	ENSMMUG00000008241	UPF2	100	98.035	Macaca_mulatta
ENSTSYG00000000935	UPF2	83	97.561	ENSMNEG00000008062	UPF2	100	97.561	Macaca_nemestrina
ENSTSYG00000000935	UPF2	100	95.880	ENSMLEG00000036120	UPF2	100	99.275	Mandrillus_leucophaeus
ENSTSYG00000000935	UPF2	97	85.556	ENSMAMG00000018276	UPF2	100	82.321	Mastacembelus_armatus
ENSTSYG00000000935	UPF2	97	86.932	ENSMZEG00005021595	UPF2	100	82.839	Maylandia_zebra
ENSTSYG00000000935	UPF2	97	97.143	ENSMGAG00000004573	UPF2	99	92.526	Meleagris_gallopavo
ENSTSYG00000000935	UPF2	97	99.435	ENSMAUG00000016512	Upf2	100	94.807	Mesocricetus_auratus
ENSTSYG00000000935	UPF2	100	95.288	ENSMICG00000001716	UPF2	100	95.288	Microcebus_murinus
ENSTSYG00000000935	UPF2	100	96.538	ENSMOCG00000008263	Upf2	100	96.538	Microtus_ochrogaster
ENSTSYG00000000935	UPF2	100	81.120	ENSMMOG00000006528	UPF2	100	81.075	Mola_mola
ENSTSYG00000000935	UPF2	100	95.122	ENSMODG00000016794	UPF2	100	95.122	Monodelphis_domestica
ENSTSYG00000000935	UPF2	99	82.330	ENSMALG00000002663	UPF2	100	82.302	Monopterus_albus
ENSTSYG00000000935	UPF2	100	96.696	MGP_CAROLIEiJ_G0023157	Upf2	100	97.905	Mus_caroli
ENSTSYG00000000935	UPF2	100	96.696	ENSMUSG00000043241	Upf2	100	96.696	Mus_musculus
ENSTSYG00000000935	UPF2	100	96.538	MGP_PahariEiJ_G0019217	Upf2	100	97.143	Mus_pahari
ENSTSYG00000000935	UPF2	100	96.932	MGP_SPRETEiJ_G0024075	Upf2	100	97.333	Mus_spretus
ENSTSYG00000000935	UPF2	100	97.640	ENSMPUG00000001064	UPF2	100	97.640	Mustela_putorius_furo
ENSTSYG00000000935	UPF2	97	100.000	ENSMLUG00000000228	UPF2	100	96.936	Myotis_lucifugus
ENSTSYG00000000935	UPF2	97	86.932	ENSNBRG00000013629	UPF2	100	82.839	Neolamprologus_brichardi
ENSTSYG00000000935	UPF2	100	97.877	ENSNLEG00000012058	UPF2	100	97.877	Nomascus_leucogenys
ENSTSYG00000000935	UPF2	58	97.927	ENSMEUG00000002180	-	55	97.927	Notamacropus_eugenii
ENSTSYG00000000935	UPF2	82	100.000	ENSOPRG00000006801	-	82	100.000	Ochotona_princeps
ENSTSYG00000000935	UPF2	97	99.432	ENSODEG00000001290	UPF2	100	95.830	Octodon_degus
ENSTSYG00000000935	UPF2	97	87.500	ENSONIG00000017991	UPF2	100	82.917	Oreochromis_niloticus
ENSTSYG00000000935	UPF2	97	98.870	ENSOCUG00000006230	UPF2	100	96.552	Oryctolagus_cuniculus
ENSTSYG00000000935	UPF2	100	81.245	ENSORLG00000017189	UPF2	100	82.293	Oryzias_latipes
ENSTSYG00000000935	UPF2	100	81.245	ENSORLG00020005969	UPF2	100	82.293	Oryzias_latipes_hni
ENSTSYG00000000935	UPF2	100	81.245	ENSORLG00015005713	UPF2	100	82.293	Oryzias_latipes_hsok
ENSTSYG00000000935	UPF2	97	84.530	ENSOMEG00000023420	UPF2	98	78.968	Oryzias_melastigma
ENSTSYG00000000935	UPF2	100	97.876	ENSOGAG00000005796	UPF2	100	97.876	Otolemur_garnettii
ENSTSYG00000000935	UPF2	100	97.486	ENSOARG00000014587	UPF2	100	97.486	Ovis_aries
ENSTSYG00000000935	UPF2	100	95.087	ENSPPAG00000037953	UPF2	100	95.087	Pan_paniscus
ENSTSYG00000000935	UPF2	100	97.482	ENSPPRG00000000690	UPF2	100	97.482	Panthera_pardus
ENSTSYG00000000935	UPF2	100	97.482	ENSPTIG00000008867	UPF2	100	97.482	Panthera_tigris_altaica
ENSTSYG00000000935	UPF2	100	97.799	ENSPTRG00000002291	UPF2	100	97.799	Pan_troglodytes
ENSTSYG00000000935	UPF2	100	97.956	ENSPANG00000023399	UPF2	100	97.956	Papio_anubis
ENSTSYG00000000935	UPF2	100	82.059	ENSPKIG00000025502	UPF2	100	82.137	Paramormyrops_kingsleyae
ENSTSYG00000000935	UPF2	61	91.501	ENSPSIG00000015158	UPF2	95	91.501	Pelodiscus_sinensis
ENSTSYG00000000935	UPF2	97	83.696	ENSPMGG00000005259	UPF2	100	80.911	Periophthalmus_magnuspinnatus
ENSTSYG00000000935	UPF2	93	93.878	ENSPEMG00000015731	Upf2	99	93.878	Peromyscus_maniculatus_bairdii
ENSTSYG00000000935	UPF2	100	94.807	ENSPCIG00000006656	UPF2	100	94.807	Phascolarctos_cinereus
ENSTSYG00000000935	UPF2	97	85.000	ENSPFOG00000017118	UPF2	100	82.059	Poecilia_formosa
ENSTSYG00000000935	UPF2	97	85.311	ENSPLAG00000005094	UPF2	100	82.059	Poecilia_latipinna
ENSTSYG00000000935	UPF2	97	85.311	ENSPMEG00000017009	UPF2	100	82.059	Poecilia_mexicana
ENSTSYG00000000935	UPF2	97	85.000	ENSPREG00000021880	UPF2	100	82.224	Poecilia_reticulata
ENSTSYG00000000935	UPF2	66	98.923	ENSPPYG00000002089	-	100	98.923	Pongo_abelii
ENSTSYG00000000935	UPF2	97	98.864	ENSPCAG00000000684	UPF2	100	82.848	Procavia_capensis
ENSTSYG00000000935	UPF2	100	97.819	ENSPCOG00000021656	UPF2	100	97.819	Propithecus_coquereli
ENSTSYG00000000935	UPF2	97	100.000	ENSPVAG00000017286	UPF2	100	90.094	Pteropus_vampyrus
ENSTSYG00000000935	UPF2	97	86.932	ENSPNYG00000017096	UPF2	100	80.391	Pundamilia_nyererei
ENSTSYG00000000935	UPF2	97	87.571	ENSPNAG00000009357	UPF2	100	83.775	Pygocentrus_nattereri
ENSTSYG00000000935	UPF2	97	93.287	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSTSYG00000000935	UPF2	97	100.000	ENSRBIG00000037780	UPF2	100	96.927	Rhinopithecus_bieti
ENSTSYG00000000935	UPF2	100	97.877	ENSRROG00000043547	UPF2	100	97.877	Rhinopithecus_roxellana
ENSTSYG00000000935	UPF2	100	97.563	ENSSBOG00000020012	UPF2	100	97.563	Saimiri_boliviensis_boliviensis
ENSTSYG00000000935	UPF2	98	88.202	ENSSFOG00015023788	upf2	100	83.087	Scleropages_formosus
ENSTSYG00000000935	UPF2	90	82.914	ENSSMAG00000007637	UPF2	100	80.140	Scophthalmus_maximus
ENSTSYG00000000935	UPF2	97	85.955	ENSSDUG00000017244	UPF2	99	82.839	Seriola_dumerili
ENSTSYG00000000935	UPF2	100	81.651	ENSSLDG00000016866	UPF2	100	81.585	Seriola_lalandi_dorsalis
ENSTSYG00000000935	UPF2	97	99.432	ENSSARG00000008615	UPF2	100	95.279	Sorex_araneus
ENSTSYG00000000935	UPF2	97	96.591	ENSSPUG00000014544	UPF2	99	90.079	Sphenodon_punctatus
ENSTSYG00000000935	UPF2	68	98.849	ENSSSCG00000011117	-	100	98.849	Sus_scrofa
ENSTSYG00000000935	UPF2	97	97.714	ENSTGUG00000002163	-	100	93.533	Taeniopygia_guttata
ENSTSYG00000000935	UPF2	100	82.243	ENSTRUG00000007519	UPF2	99	82.215	Takifugu_rubripes
ENSTSYG00000000935	UPF2	97	85.475	ENSTNIG00000004453	UPF2	100	79.907	Tetraodon_nigroviridis
ENSTSYG00000000935	UPF2	89	98.864	ENSTBEG00000012679	UPF2	93	90.432	Tupaia_belangeri
ENSTSYG00000000935	UPF2	100	97.404	ENSTTRG00000016388	UPF2	100	97.404	Tursiops_truncatus
ENSTSYG00000000935	UPF2	100	94.750	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSTSYG00000000935	UPF2	100	97.718	ENSUMAG00000012953	UPF2	95	97.718	Ursus_maritimus
ENSTSYG00000000935	UPF2	87	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSTSYG00000000935	UPF2	100	97.482	ENSVVUG00000006166	UPF2	100	97.482	Vulpes_vulpes
ENSTSYG00000000935	UPF2	98	88.360	ENSXETG00000033103	UPF2	91	88.245	Xenopus_tropicalis
ENSTSYG00000000935	UPF2	97	85.000	ENSXCOG00000011604	UPF2	100	81.719	Xiphophorus_couchianus
ENSTSYG00000000935	UPF2	97	85.311	ENSXMAG00000017209	UPF2	100	81.747	Xiphophorus_maculatus