EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000001567 (Gene tree)
Gene ID: 103258625
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 18275 bases
Position: chrKE926366.1:1415-19689
Accession: 103258625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000001461	tRNA-synt_1g	PF09334.11	4.7e-11	1	1
ENSTSYP00000001461	Anticodon_1	PF08264.13	2.1e-32	1	1
ENSTSYP00000001461	tRNA-synt_1	PF00133.22	5.7e-204	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000001567	VARS-201	3922	XM_008056290	ENSTSYP00000001461	1264 (aa)	XP_008054481	A0A1U7TL76

Gene Model

Click here to download ENSTSYG00000001567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000001567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000001567	VARS	82	49.856	ENSTSYG00000009904	VARS2	91	51.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000001567	VARS	100	96.044	ENSG00000204394	VARS	100	97.701	Homo_sapiens
ENSTSYG00000001567	VARS	98	64.635	ENSAPOG00000020921	vars	99	64.395	Acanthochromis_polyacanthus
ENSTSYG00000001567	VARS	98	64.635	ENSAPOG00000020691	vars	99	64.395	Acanthochromis_polyacanthus
ENSTSYG00000001567	VARS	100	94.704	ENSAMEG00000006417	VARS	100	94.704	Ailuropoda_melanoleuca
ENSTSYG00000001567	VARS	100	65.466	ENSACIG00000013752	vars	100	65.228	Amphilophus_citrinellus
ENSTSYG00000001567	VARS	100	64.524	ENSAOCG00000002447	vars	100	64.280	Amphiprion_ocellaris
ENSTSYG00000001567	VARS	100	64.524	ENSAPEG00000010638	vars	99	64.541	Amphiprion_percula
ENSTSYG00000001567	VARS	100	64.437	ENSATEG00000020219	vars	100	64.201	Anabas_testudineus
ENSTSYG00000001567	VARS	90	70.165	ENSACAG00000029133	-	99	69.991	Anolis_carolinensis
ENSTSYG00000001567	VARS	100	96.282	ENSANAG00000015453	VARS	100	96.282	Aotus_nancymaae
ENSTSYG00000001567	VARS	100	64.651	ENSACLG00000025699	vars	97	64.413	Astatotilapia_calliptera
ENSTSYG00000001567	VARS	94	66.055	ENSAMXG00000017716	vars	95	66.055	Astyanax_mexicanus
ENSTSYG00000001567	VARS	100	95.332	ENSBTAG00000005631	VARS	100	95.332	Bos_taurus
ENSTSYG00000001567	VARS	100	96.123	ENSCJAG00000002604	VARS	100	96.123	Callithrix_jacchus
ENSTSYG00000001567	VARS	100	94.541	ENSCAFG00000000636	VARS	100	94.541	Canis_familiaris
ENSTSYG00000001567	VARS	94	94.764	ENSCAFG00020020790	VARS	96	94.764	Canis_lupus_dingo
ENSTSYG00000001567	VARS	100	95.491	ENSCHIG00000011008	VARS	100	95.491	Capra_hircus
ENSTSYG00000001567	VARS	91	90.917	ENSCAPG00000013736	VARS	99	90.917	Cavia_aperea
ENSTSYG00000001567	VARS	100	91.930	ENSCPOG00000000870	VARS	100	91.930	Cavia_porcellus
ENSTSYG00000001567	VARS	100	96.282	ENSCCAG00000035656	VARS	100	96.517	Cebus_capucinus
ENSTSYG00000001567	VARS	100	95.886	ENSCATG00000022394	VARS	100	95.886	Cercocebus_atys
ENSTSYG00000001567	VARS	88	89.589	ENSCLAG00000009470	VARS	92	89.589	Chinchilla_lanigera
ENSTSYG00000001567	VARS	100	95.965	ENSCSAG00000008784	VARS	100	95.965	Chlorocebus_sabaeus
ENSTSYG00000001567	VARS	77	73.614	ENSCPBG00000007943	VARS	96	73.511	Chrysemys_picta_bellii
ENSTSYG00000001567	VARS	100	96.044	ENSCANG00000033570	VARS	100	96.044	Colobus_angolensis_palliatus
ENSTSYG00000001567	VARS	100	93.592	ENSCGRG00001005686	Vars	100	93.592	Cricetulus_griseus_chok1gshd
ENSTSYG00000001567	VARS	92	88.442	ENSCGRG00000013352	Vars	78	88.442	Cricetulus_griseus_crigri
ENSTSYG00000001567	VARS	100	64.269	ENSCSEG00000019652	vars	100	64.111	Cynoglossus_semilaevis
ENSTSYG00000001567	VARS	100	64.957	ENSCVAG00000022398	vars	100	64.957	Cyprinodon_variegatus
ENSTSYG00000001567	VARS	100	64.651	ENSDARG00000044575	vars	100	64.724	Danio_rerio
ENSTSYG00000001567	VARS	84	93.227	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSTSYG00000001567	VARS	69	86.980	ENSETEG00000003824	VARS	76	86.980	Echinops_telfairi
ENSTSYG00000001567	VARS	50	70.471	ENSEBUG00000007086	vars	84	69.634	Eptatretus_burgeri
ENSTSYG00000001567	VARS	57	61.813	ENSEBUG00000004637	vars	100	62.088	Eptatretus_burgeri
ENSTSYG00000001567	VARS	100	95.807	ENSEASG00005015673	VARS	100	95.807	Equus_asinus_asinus
ENSTSYG00000001567	VARS	100	94.862	ENSECAG00000014620	VARS	100	95.336	Equus_caballus
ENSTSYG00000001567	VARS	83	91.696	ENSEEUG00000004116	VARS	83	91.696	Erinaceus_europaeus
ENSTSYG00000001567	VARS	100	64.319	ENSELUG00000006550	vars	97	64.396	Esox_lucius
ENSTSYG00000001567	VARS	100	94.778	ENSFCAG00000004510	VARS	100	94.778	Felis_catus
ENSTSYG00000001567	VARS	82	91.856	ENSFDAG00000011401	VARS	100	91.856	Fukomys_damarensis
ENSTSYG00000001567	VARS	100	65.114	ENSFHEG00000010672	vars	100	65.167	Fundulus_heteroclitus
ENSTSYG00000001567	VARS	92	65.973	ENSGMOG00000014908	vars	97	66.083	Gadus_morhua
ENSTSYG00000001567	VARS	100	65.214	ENSGAFG00000021630	vars	100	65.214	Gambusia_affinis
ENSTSYG00000001567	VARS	92	65.748	ENSGACG00000009601	vars	98	65.417	Gasterosteus_aculeatus
ENSTSYG00000001567	VARS	50	64.771	ENSGAGG00000006508	-	91	64.297	Gopherus_agassizii
ENSTSYG00000001567	VARS	100	96.203	ENSGGOG00000011364	VARS	100	96.203	Gorilla_gorilla
ENSTSYG00000001567	VARS	100	64.574	ENSHBUG00000017151	vars	97	64.336	Haplochromis_burtoni
ENSTSYG00000001567	VARS	100	91.139	ENSHGLG00000011646	VARS	100	90.823	Heterocephalus_glaber_female
ENSTSYG00000001567	VARS	93	83.472	ENSHGLG00100018062	VARS	100	83.389	Heterocephalus_glaber_male
ENSTSYG00000001567	VARS	99	64.519	ENSHCOG00000012198	vars	99	64.514	Hippocampus_comes
ENSTSYG00000001567	VARS	100	64.747	ENSIPUG00000005218	vars	100	64.747	Ictalurus_punctatus
ENSTSYG00000001567	VARS	100	94.862	ENSSTOG00000013112	VARS	100	94.862	Ictidomys_tridecemlineatus
ENSTSYG00000001567	VARS	100	72.785	ENSJJAG00000015343	-	100	72.785	Jaculus_jaculus
ENSTSYG00000001567	VARS	100	92.247	ENSJJAG00000019749	-	100	91.614	Jaculus_jaculus
ENSTSYG00000001567	VARS	100	65.008	ENSKMAG00000009455	vars	100	64.771	Kryptolebias_marmoratus
ENSTSYG00000001567	VARS	100	63.399	ENSLBEG00000010341	vars	100	63.953	Labrus_bergylta
ENSTSYG00000001567	VARS	94	62.202	ENSLACG00000015232	VARS	99	62.613	Latimeria_chalumnae
ENSTSYG00000001567	VARS	100	66.641	ENSLOCG00000004240	vars	100	66.406	Lepisosteus_oculatus
ENSTSYG00000001567	VARS	100	93.671	ENSLAFG00000023090	VARS	100	93.275	Loxodonta_africana
ENSTSYG00000001567	VARS	100	95.965	ENSMFAG00000001032	VARS	100	95.965	Macaca_fascicularis
ENSTSYG00000001567	VARS	100	95.965	ENSMMUG00000006828	VARS	100	95.965	Macaca_mulatta
ENSTSYG00000001567	VARS	100	95.965	ENSMNEG00000042072	VARS	100	95.965	Macaca_nemestrina
ENSTSYG00000001567	VARS	100	95.886	ENSMLEG00000039307	VARS	100	95.886	Mandrillus_leucophaeus
ENSTSYG00000001567	VARS	100	64.336	ENSMAMG00000003949	vars	100	64.536	Mastacembelus_armatus
ENSTSYG00000001567	VARS	100	64.651	ENSMZEG00005018327	vars	100	64.167	Maylandia_zebra
ENSTSYG00000001567	VARS	100	93.196	ENSMAUG00000006715	Vars	100	93.196	Mesocricetus_auratus
ENSTSYG00000001567	VARS	100	94.937	ENSMICG00000003548	VARS	100	94.937	Microcebus_murinus
ENSTSYG00000001567	VARS	100	90.823	ENSMOCG00000015404	Vars	100	90.665	Microtus_ochrogaster
ENSTSYG00000001567	VARS	100	64.129	ENSMMOG00000015801	vars	100	64.050	Mola_mola
ENSTSYG00000001567	VARS	100	86.313	ENSMODG00000015204	-	100	86.313	Monodelphis_domestica
ENSTSYG00000001567	VARS	99	64.201	ENSMALG00000022532	vars	99	63.987	Monopterus_albus
ENSTSYG00000001567	VARS	100	93.354	MGP_CAROLIEiJ_G0021491	Vars	100	92.880	Mus_caroli
ENSTSYG00000001567	VARS	100	93.354	ENSMUSG00000007029	Vars	100	92.880	Mus_musculus
ENSTSYG00000001567	VARS	100	92.880	MGP_PahariEiJ_G0020486	Vars	100	92.484	Mus_pahari
ENSTSYG00000001567	VARS	100	93.434	MGP_SPRETEiJ_G0022396	Vars	100	92.959	Mus_spretus
ENSTSYG00000001567	VARS	100	95.095	ENSMPUG00000010821	VARS	100	95.095	Mustela_putorius_furo
ENSTSYG00000001567	VARS	78	93.826	ENSMLUG00000013126	VARS	100	94.433	Myotis_lucifugus
ENSTSYG00000001567	VARS	100	92.484	ENSNGAG00000012151	Vars	100	92.801	Nannospalax_galili
ENSTSYG00000001567	VARS	100	64.341	ENSNBRG00000020520	vars	100	64.103	Neolamprologus_brichardi
ENSTSYG00000001567	VARS	100	95.491	ENSNLEG00000006351	VARS	100	95.491	Nomascus_leucogenys
ENSTSYG00000001567	VARS	100	82.516	ENSMEUG00000011378	VARS	100	82.516	Notamacropus_eugenii
ENSTSYG00000001567	VARS	100	93.750	ENSOPRG00000003607	VARS	100	93.750	Ochotona_princeps
ENSTSYG00000001567	VARS	100	91.297	ENSODEG00000017681	VARS	100	90.744	Octodon_degus
ENSTSYG00000001567	VARS	100	65.051	ENSONIG00000013064	vars	99	67.565	Oreochromis_niloticus
ENSTSYG00000001567	VARS	77	78.716	ENSOANG00000005400	VARS	98	77.883	Ornithorhynchus_anatinus
ENSTSYG00000001567	VARS	100	91.627	ENSOCUG00000022463	VARS	100	91.785	Oryctolagus_cuniculus
ENSTSYG00000001567	VARS	100	64.220	ENSORLG00000013063	vars	100	64.313	Oryzias_latipes
ENSTSYG00000001567	VARS	100	64.688	ENSORLG00020003504	vars	100	64.765	Oryzias_latipes_hni
ENSTSYG00000001567	VARS	100	64.660	ENSORLG00015009001	vars	100	64.715	Oryzias_latipes_hsok
ENSTSYG00000001567	VARS	100	64.583	ENSOMEG00000015016	vars	100	64.583	Oryzias_melastigma
ENSTSYG00000001567	VARS	100	94.937	ENSOGAG00000007515	VARS	100	94.937	Otolemur_garnettii
ENSTSYG00000001567	VARS	100	96.282	ENSPPAG00000034012	VARS	100	96.282	Pan_paniscus
ENSTSYG00000001567	VARS	100	94.937	ENSPPRG00000014855	VARS	100	94.937	Panthera_pardus
ENSTSYG00000001567	VARS	85	95.074	ENSPTIG00000010462	VARS	95	95.055	Panthera_tigris_altaica
ENSTSYG00000001567	VARS	100	96.203	ENSPTRG00000017985	VARS	100	96.203	Pan_troglodytes
ENSTSYG00000001567	VARS	100	94.322	ENSPANG00000014565	VARS	100	94.322	Papio_anubis
ENSTSYG00000001567	VARS	100	63.552	ENSPKIG00000016304	vars	100	63.552	Paramormyrops_kingsleyae
ENSTSYG00000001567	VARS	100	66.088	ENSPMGG00000023909	vars	100	65.931	Periophthalmus_magnuspinnatus
ENSTSYG00000001567	VARS	100	94.146	ENSPEMG00000006639	Vars	100	94.146	Peromyscus_maniculatus_bairdii
ENSTSYG00000001567	VARS	100	85.759	ENSPCIG00000018553	VARS	100	85.759	Phascolarctos_cinereus
ENSTSYG00000001567	VARS	100	65.447	ENSPFOG00000015690	vars	100	65.447	Poecilia_formosa
ENSTSYG00000001567	VARS	100	66.090	ENSPLAG00000009590	vars	100	65.775	Poecilia_latipinna
ENSTSYG00000001567	VARS	100	65.447	ENSPMEG00000004708	vars	100	65.447	Poecilia_mexicana
ENSTSYG00000001567	VARS	100	63.858	ENSPREG00000013264	vars	100	63.686	Poecilia_reticulata
ENSTSYG00000001567	VARS	100	94.541	ENSPPYG00000016460	VARS	100	94.541	Pongo_abelii
ENSTSYG00000001567	VARS	86	91.562	ENSPCAG00000013565	VARS	86	91.562	Procavia_capensis
ENSTSYG00000001567	VARS	100	96.206	ENSPCOG00000010942	VARS	100	96.206	Propithecus_coquereli
ENSTSYG00000001567	VARS	100	91.456	ENSPVAG00000012403	VARS	100	91.456	Pteropus_vampyrus
ENSTSYG00000001567	VARS	100	64.574	ENSPNYG00000022511	vars	100	64.336	Pundamilia_nyererei
ENSTSYG00000001567	VARS	100	64.779	ENSPNAG00000020962	vars	100	64.779	Pygocentrus_nattereri
ENSTSYG00000001567	VARS	100	93.671	ENSRNOG00000000867	Vars	100	93.671	Rattus_norvegicus
ENSTSYG00000001567	VARS	100	96.044	ENSRBIG00000041669	VARS	100	96.044	Rhinopithecus_bieti
ENSTSYG00000001567	VARS	100	96.044	ENSRROG00000045490	VARS	100	96.044	Rhinopithecus_roxellana
ENSTSYG00000001567	VARS	100	96.123	ENSSBOG00000035402	VARS	100	96.123	Saimiri_boliviensis_boliviensis
ENSTSYG00000001567	VARS	100	81.225	ENSSHAG00000006937	VARS	100	81.461	Sarcophilus_harrisii
ENSTSYG00000001567	VARS	100	64.402	ENSSFOG00015014272	vars	97	71.935	Scleropages_formosus
ENSTSYG00000001567	VARS	100	63.235	ENSSMAG00000009596	vars	99	63.150	Scophthalmus_maximus
ENSTSYG00000001567	VARS	100	64.114	ENSSDUG00000014177	vars	100	64.003	Seriola_dumerili
ENSTSYG00000001567	VARS	100	64.009	ENSSLDG00000025316	vars	100	64.003	Seriola_lalandi_dorsalis
ENSTSYG00000001567	VARS	100	64.613	ENSSPAG00000017068	vars	100	64.486	Stegastes_partitus
ENSTSYG00000001567	VARS	100	93.676	ENSSSCG00000038950	VARS	100	94.150	Sus_scrofa
ENSTSYG00000001567	VARS	82	63.854	ENSTRUG00000012307	vars	98	63.897	Takifugu_rubripes
ENSTSYG00000001567	VARS	100	64.949	ENSTNIG00000008011	vars	100	64.789	Tetraodon_nigroviridis
ENSTSYG00000001567	VARS	54	96.255	ENSTBEG00000004728	-	60	96.255	Tupaia_belangeri
ENSTSYG00000001567	VARS	100	86.472	ENSTTRG00000014128	VARS	100	86.472	Tursiops_truncatus
ENSTSYG00000001567	VARS	100	91.038	ENSUAMG00000010424	VARS	100	91.038	Ursus_americanus
ENSTSYG00000001567	VARS	93	95.397	ENSUMAG00000013486	VARS	98	94.921	Ursus_maritimus
ENSTSYG00000001567	VARS	100	94.308	ENSVVUG00000021323	VARS	100	94.071	Vulpes_vulpes
ENSTSYG00000001567	VARS	96	62.813	ENSXETG00000024076	vars	98	61.974	Xenopus_tropicalis
ENSTSYG00000001567	VARS	100	65.354	ENSXCOG00000019172	vars	100	65.354	Xiphophorus_couchianus
ENSTSYG00000001567	VARS	100	65.214	ENSXMAG00000010927	vars	100	65.214	Xiphophorus_maculatus