EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000001755 (Gene tree)
Gene ID: 103273218
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 46969 bases
Position: chrKE948397.1:674886-721854
Accession: 103273218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000033789	DND1_DSRM	PF14709.7	1e-24	1	1
ENSTSYP00000001633	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSTSYP00000033789	RRM_1	PF00076.22	1.5e-40	1	3
ENSTSYP00000033789	RRM_1	PF00076.22	1.5e-40	2	3
ENSTSYP00000033789	RRM_1	PF00076.22	1.5e-40	3	3
ENSTSYP00000001633	RRM_1	PF00076.22	2e-40	1	3
ENSTSYP00000001633	RRM_1	PF00076.22	2e-40	2	3
ENSTSYP00000001633	RRM_1	PF00076.22	2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000041322	A1CF-201	1816	XM_008070653	ENSTSYP00000033789	551 (aa)	XP_008068844	UPI000C2F6453
ENSTSYT00000001752	A1CF-202	1785	-	ENSTSYP00000001633	594 (aa)	-	UPI000C2F5A87

Gene Model

Click here to download ENSTSYG00000001755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000001755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000001755	A1CF	53	53.872	ENSTSYG00000007424	HNRNPR	50	53.333
ENSTSYG00000001755	A1CF	68	51.392	ENSTSYG00000033612	RBM47	68	51.392
ENSTSYG00000001755	A1CF	69	73.381	ENSTSYG00000010435	RBM46	80	73.381
ENSTSYG00000001755	A1CF	52	53.103	ENSTSYG00000013305	SYNCRIP	70	45.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000001755	A1CF	100	96.926	ENSG00000148584	A1CF	100	92.359	Homo_sapiens
ENSTSYG00000001755	A1CF	100	74.776	ENSAPOG00000008259	a1cf	94	74.597	Acanthochromis_polyacanthus
ENSTSYG00000001755	A1CF	100	93.918	ENSAMEG00000000523	A1CF	95	95.009	Ailuropoda_melanoleuca
ENSTSYG00000001755	A1CF	100	76.182	ENSACIG00000008632	a1cf	94	77.758	Amphilophus_citrinellus
ENSTSYG00000001755	A1CF	100	75.309	ENSAOCG00000023744	a1cf	88	84.953	Amphiprion_ocellaris
ENSTSYG00000001755	A1CF	100	74.261	ENSAPEG00000009537	a1cf	97	73.667	Amphiprion_percula
ENSTSYG00000001755	A1CF	100	76.748	ENSATEG00000013720	a1cf	94	77.972	Anabas_testudineus
ENSTSYG00000001755	A1CF	100	87.679	ENSAPLG00000002964	A1CF	97	85.641	Anas_platyrhynchos
ENSTSYG00000001755	A1CF	100	84.964	ENSACAG00000015269	A1CF	94	84.783	Anolis_carolinensis
ENSTSYG00000001755	A1CF	100	97.107	ENSANAG00000019974	A1CF	100	92.691	Aotus_nancymaae
ENSTSYG00000001755	A1CF	100	74.250	ENSACLG00000017428	a1cf	94	75.661	Astatotilapia_calliptera
ENSTSYG00000001755	A1CF	95	76.654	ENSAMXG00000018180	a1cf	93	77.757	Astyanax_mexicanus
ENSTSYG00000001755	A1CF	100	94.585	ENSBTAG00000021195	A1CF	94	96.040	Bos_taurus
ENSTSYG00000001755	A1CF	100	96.078	ENSCJAG00000005045	A1CF	95	97.158	Callithrix_jacchus
ENSTSYG00000001755	A1CF	100	93.560	ENSCAFG00000015581	A1CF	95	94.296	Canis_familiaris
ENSTSYG00000001755	A1CF	100	93.560	ENSCAFG00020026421	A1CF	98	95.623	Canis_lupus_dingo
ENSTSYG00000001755	A1CF	100	92.705	ENSCHIG00000020411	A1CF	95	93.440	Capra_hircus
ENSTSYG00000001755	A1CF	92	94.737	ENSCAPG00000017386	A1CF	90	94.737	Cavia_aperea
ENSTSYG00000001755	A1CF	100	94.118	ENSCPOG00000009807	A1CF	95	95.382	Cavia_porcellus
ENSTSYG00000001755	A1CF	100	96.250	ENSCCAG00000018168	A1CF	100	93.322	Cebus_capucinus
ENSTSYG00000001755	A1CF	100	97.096	ENSCATG00000043715	A1CF	100	91.167	Cercocebus_atys
ENSTSYG00000001755	A1CF	100	93.606	ENSCLAG00000010424	A1CF	95	94.336	Chinchilla_lanigera
ENSTSYG00000001755	A1CF	100	95.707	ENSCSAG00000007032	A1CF	95	96.791	Chlorocebus_sabaeus
ENSTSYG00000001755	A1CF	100	94.065	ENSCHOG00000009089	A1CF	100	88.833	Choloepus_hoffmanni
ENSTSYG00000001755	A1CF	100	87.143	ENSCPBG00000026464	A1CF	95	88.078	Chrysemys_picta_bellii
ENSTSYG00000001755	A1CF	100	95.707	ENSCANG00000038032	A1CF	95	96.791	Colobus_angolensis_palliatus
ENSTSYG00000001755	A1CF	100	91.815	ENSCGRG00001017413	A1cf	95	92.730	Cricetulus_griseus_chok1gshd
ENSTSYG00000001755	A1CF	100	91.103	ENSCGRG00000017332	A1cf	95	92.730	Cricetulus_griseus_crigri
ENSTSYG00000001755	A1CF	100	74.648	ENSCSEG00000002361	a1cf	94	76.761	Cynoglossus_semilaevis
ENSTSYG00000001755	A1CF	100	75.304	ENSCVAG00000010520	a1cf	94	76.696	Cyprinodon_variegatus
ENSTSYG00000001755	A1CF	100	80.072	ENSDARG00000002968	a1cf	94	81.508	Danio_rerio
ENSTSYG00000001755	A1CF	100	93.060	ENSDNOG00000002829	A1CF	95	93.794	Dasypus_novemcinctus
ENSTSYG00000001755	A1CF	83	97.266	ENSETEG00000012527	A1CF	78	97.266	Echinops_telfairi
ENSTSYG00000001755	A1CF	100	94.858	ENSEASG00005012924	A1CF	99	94.627	Equus_asinus_asinus
ENSTSYG00000001755	A1CF	100	94.326	ENSECAG00000010424	A1CF	95	95.406	Equus_caballus
ENSTSYG00000001755	A1CF	83	81.659	ENSEEUG00000000013	A1CF	96	82.688	Erinaceus_europaeus
ENSTSYG00000001755	A1CF	100	77.345	ENSELUG00000003159	a1cf	97	77.855	Esox_lucius
ENSTSYG00000001755	A1CF	100	94.737	ENSFCAG00000011179	A1CF	100	90.000	Felis_catus
ENSTSYG00000001755	A1CF	100	88.225	ENSFALG00000013183	A1CF	94	88.043	Ficedula_albicollis
ENSTSYG00000001755	A1CF	100	94.224	ENSFDAG00000019371	A1CF	94	94.043	Fukomys_damarensis
ENSTSYG00000001755	A1CF	92	74.953	ENSFHEG00000019652	a1cf	90	76.471	Fundulus_heteroclitus
ENSTSYG00000001755	A1CF	100	70.629	ENSGMOG00000018943	a1cf	97	70.085	Gadus_morhua
ENSTSYG00000001755	A1CF	100	87.321	ENSGALG00000003765	A1CF	99	84.838	Gallus_gallus
ENSTSYG00000001755	A1CF	100	71.378	ENSGAFG00000014868	a1cf	94	71.025	Gambusia_affinis
ENSTSYG00000001755	A1CF	100	72.648	ENSGACG00000010241	a1cf	94	74.390	Gasterosteus_aculeatus
ENSTSYG00000001755	A1CF	100	86.964	ENSGAGG00000016508	A1CF	98	87.434	Gopherus_agassizii
ENSTSYG00000001755	A1CF	100	95.722	ENSGGOG00000009670	A1CF	100	92.857	Gorilla_gorilla
ENSTSYG00000001755	A1CF	100	75.131	ENSHBUG00000021959	a1cf	94	77.408	Haplochromis_burtoni
ENSTSYG00000001755	A1CF	100	93.772	ENSHGLG00000008955	A1CF	95	94.504	Heterocephalus_glaber_female
ENSTSYG00000001755	A1CF	100	93.060	ENSHGLG00100000518	A1CF	95	93.794	Heterocephalus_glaber_male
ENSTSYG00000001755	A1CF	100	69.031	ENSHCOG00000017669	a1cf	94	72.884	Hippocampus_comes
ENSTSYG00000001755	A1CF	89	81.980	ENSIPUG00000010367	a1cf	91	82.549	Ictalurus_punctatus
ENSTSYG00000001755	A1CF	100	75.731	ENSKMAG00000006568	a1cf	94	77.625	Kryptolebias_marmoratus
ENSTSYG00000001755	A1CF	99	74.350	ENSLBEG00000020994	a1cf	96	74.247	Labrus_bergylta
ENSTSYG00000001755	A1CF	100	82.883	ENSLACG00000008061	A1CF	94	82.523	Latimeria_chalumnae
ENSTSYG00000001755	A1CF	100	80.674	ENSLOCG00000006302	a1cf	97	80.069	Lepisosteus_oculatus
ENSTSYG00000001755	A1CF	100	93.060	ENSLAFG00000015462	A1CF	95	94.149	Loxodonta_africana
ENSTSYG00000001755	A1CF	100	97.459	ENSMFAG00000035948	A1CF	100	91.500	Macaca_fascicularis
ENSTSYG00000001755	A1CF	100	97.459	ENSMMUG00000007077	A1CF	100	93.289	Macaca_mulatta
ENSTSYG00000001755	A1CF	100	97.096	ENSMNEG00000031454	A1CF	100	92.833	Macaca_nemestrina
ENSTSYG00000001755	A1CF	100	95.707	ENSMLEG00000037223	A1CF	95	96.791	Mandrillus_leucophaeus
ENSTSYG00000001755	A1CF	100	74.692	ENSMAMG00000010402	a1cf	94	76.491	Mastacembelus_armatus
ENSTSYG00000001755	A1CF	100	75.000	ENSMZEG00005013245	a1cf	94	77.087	Maylandia_zebra
ENSTSYG00000001755	A1CF	100	87.344	ENSMGAG00000001507	A1CF	97	85.324	Meleagris_gallopavo
ENSTSYG00000001755	A1CF	100	91.459	ENSMAUG00000007422	A1cf	95	92.553	Mesocricetus_auratus
ENSTSYG00000001755	A1CF	100	95.512	ENSMICG00000003377	A1CF	100	91.030	Microcebus_murinus
ENSTSYG00000001755	A1CF	100	91.459	ENSMOCG00000021536	A1cf	95	92.021	Microtus_ochrogaster
ENSTSYG00000001755	A1CF	93	71.917	ENSMMOG00000009422	a1cf	94	70.141	Mola_mola
ENSTSYG00000001755	A1CF	91	91.071	ENSMODG00000016478	A1CF	90	91.959	Monodelphis_domestica
ENSTSYG00000001755	A1CF	100	73.874	ENSMALG00000012992	a1cf	94	73.333	Monopterus_albus
ENSTSYG00000001755	A1CF	100	92.238	MGP_CAROLIEiJ_G0022873	A1cf	95	91.667	Mus_caroli
ENSTSYG00000001755	A1CF	100	92.238	ENSMUSG00000052595	A1cf	99	95.623	Mus_musculus
ENSTSYG00000001755	A1CF	100	91.697	MGP_PahariEiJ_G0014366	A1cf	95	90.780	Mus_pahari
ENSTSYG00000001755	A1CF	100	91.877	MGP_SPRETEiJ_G0023792	A1cf	95	91.312	Mus_spretus
ENSTSYG00000001755	A1CF	100	87.835	ENSMPUG00000016971	A1CF	95	88.948	Mustela_putorius_furo
ENSTSYG00000001755	A1CF	100	92.527	ENSMLUG00000016071	A1CF	95	93.085	Myotis_lucifugus
ENSTSYG00000001755	A1CF	100	92.883	ENSNGAG00000015136	A1cf	95	93.617	Nannospalax_galili
ENSTSYG00000001755	A1CF	100	75.482	ENSNBRG00000001712	a1cf	94	77.758	Neolamprologus_brichardi
ENSTSYG00000001755	A1CF	100	96.441	ENSNLEG00000012028	A1CF	95	97.518	Nomascus_leucogenys
ENSTSYG00000001755	A1CF	100	90.761	ENSMEUG00000015909	A1CF	100	90.399	Notamacropus_eugenii
ENSTSYG00000001755	A1CF	88	82.317	ENSOPRG00000010667	A1CF	90	83.603	Ochotona_princeps
ENSTSYG00000001755	A1CF	100	75.832	ENSONIG00000019105	a1cf	94	77.233	Oreochromis_niloticus
ENSTSYG00000001755	A1CF	77	89.202	ENSOANG00000007360	A1CF	92	89.202	Ornithorhynchus_anatinus
ENSTSYG00000001755	A1CF	100	94.234	ENSOCUG00000011587	A1CF	94	94.414	Oryctolagus_cuniculus
ENSTSYG00000001755	A1CF	100	72.870	ENSORLG00000013342	a1cf	94	73.666	Oryzias_latipes
ENSTSYG00000001755	A1CF	100	74.523	ENSORLG00020000586	a1cf	94	75.217	Oryzias_latipes_hni
ENSTSYG00000001755	A1CF	100	74.350	ENSORLG00015018569	a1cf	94	75.390	Oryzias_latipes_hsok
ENSTSYG00000001755	A1CF	100	75.923	ENSOMEG00000013531	a1cf	94	75.571	Oryzias_melastigma
ENSTSYG00000001755	A1CF	100	93.739	ENSOGAG00000012884	A1CF	95	94.831	Otolemur_garnettii
ENSTSYG00000001755	A1CF	100	93.060	ENSOARG00000013695	A1CF	95	93.794	Ovis_aries
ENSTSYG00000001755	A1CF	100	95.722	ENSPPAG00000028115	A1CF	100	92.857	Pan_paniscus
ENSTSYG00000001755	A1CF	100	93.739	ENSPPRG00000012180	A1CF	100	90.803	Panthera_pardus
ENSTSYG00000001755	A1CF	100	93.739	ENSPTIG00000021223	A1CF	100	90.803	Panthera_tigris_altaica
ENSTSYG00000001755	A1CF	100	96.926	ENSPTRG00000002508	A1CF	97	95.544	Pan_troglodytes
ENSTSYG00000001755	A1CF	100	97.459	ENSPANG00000021988	A1CF	100	91.500	Papio_anubis
ENSTSYG00000001755	A1CF	100	79.469	ENSPKIG00000025176	a1cf	97	78.893	Paramormyrops_kingsleyae
ENSTSYG00000001755	A1CF	100	88.225	ENSPSIG00000010318	A1CF	94	87.862	Pelodiscus_sinensis
ENSTSYG00000001755	A1CF	88	71.694	ENSPMGG00000013359	a1cf	93	67.897	Periophthalmus_magnuspinnatus
ENSTSYG00000001755	A1CF	100	92.349	ENSPEMG00000015021	A1cf	95	93.085	Peromyscus_maniculatus_bairdii
ENSTSYG00000001755	A1CF	100	90.217	ENSPCIG00000002175	A1CF	94	89.855	Phascolarctos_cinereus
ENSTSYG00000001755	A1CF	100	74.483	ENSPFOG00000007437	-	94	77.069	Poecilia_formosa
ENSTSYG00000001755	A1CF	100	74.655	ENSPFOG00000006683	a1cf	94	77.241	Poecilia_formosa
ENSTSYG00000001755	A1CF	100	75.524	ENSPLAG00000000026	a1cf	94	76.923	Poecilia_latipinna
ENSTSYG00000001755	A1CF	100	75.524	ENSPLAG00000001210	-	94	76.923	Poecilia_latipinna
ENSTSYG00000001755	A1CF	100	67.544	ENSPMEG00000000921	a1cf	94	68.947	Poecilia_mexicana
ENSTSYG00000001755	A1CF	100	66.609	ENSPMEG00000015529	-	94	69.204	Poecilia_mexicana
ENSTSYG00000001755	A1CF	100	74.483	ENSPREG00000016298	a1cf	94	77.069	Poecilia_reticulata
ENSTSYG00000001755	A1CF	100	97.834	ENSPPYG00000002819	A1CF	94	97.834	Pongo_abelii
ENSTSYG00000001755	A1CF	84	74.569	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSTSYG00000001755	A1CF	100	94.671	ENSPCOG00000024172	A1CF	95	95.752	Propithecus_coquereli
ENSTSYG00000001755	A1CF	100	74.266	ENSPNYG00000017944	a1cf	94	77.720	Pundamilia_nyererei
ENSTSYG00000001755	A1CF	100	81.528	ENSPNAG00000007704	a1cf	94	80.995	Pygocentrus_nattereri
ENSTSYG00000001755	A1CF	100	92.780	ENSRNOG00000033195	A1cf	94	92.419	Rattus_norvegicus
ENSTSYG00000001755	A1CF	100	88.948	ENSRBIG00000042892	A1CF	100	96.200	Rhinopithecus_bieti
ENSTSYG00000001755	A1CF	100	97.459	ENSRROG00000041398	A1CF	99	97.459	Rhinopithecus_roxellana
ENSTSYG00000001755	A1CF	100	95.907	ENSSBOG00000021930	A1CF	100	97.217	Saimiri_boliviensis_boliviensis
ENSTSYG00000001755	A1CF	100	89.312	ENSSHAG00000005096	A1CF	95	89.146	Sarcophilus_harrisii
ENSTSYG00000001755	A1CF	100	80.071	ENSSFOG00015011774	a1cf	94	79.893	Scleropages_formosus
ENSTSYG00000001755	A1CF	100	74.828	ENSSMAG00000013271	a1cf	94	76.207	Scophthalmus_maximus
ENSTSYG00000001755	A1CF	100	74.868	ENSSDUG00000013930	a1cf	94	76.977	Seriola_dumerili
ENSTSYG00000001755	A1CF	100	70.745	ENSSLDG00000004290	a1cf	94	71.631	Seriola_lalandi_dorsalis
ENSTSYG00000001755	A1CF	100	85.018	ENSSARG00000005940	A1CF	99	81.218	Sorex_araneus
ENSTSYG00000001755	A1CF	100	86.453	ENSSPUG00000006797	A1CF	99	83.500	Sphenodon_punctatus
ENSTSYG00000001755	A1CF	100	93.772	ENSSSCG00000010431	A1CF	95	94.504	Sus_scrofa
ENSTSYG00000001755	A1CF	100	86.372	ENSTGUG00000005090	A1CF	97	84.746	Taeniopygia_guttata
ENSTSYG00000001755	A1CF	100	73.921	ENSTRUG00000001982	a1cf	94	74.957	Takifugu_rubripes
ENSTSYG00000001755	A1CF	100	73.838	ENSTNIG00000003580	a1cf	94	74.699	Tetraodon_nigroviridis
ENSTSYG00000001755	A1CF	100	89.892	ENSTTRG00000013190	A1CF	100	84.859	Tursiops_truncatus
ENSTSYG00000001755	A1CF	100	95.281	ENSUAMG00000020065	A1CF	94	95.281	Ursus_americanus
ENSTSYG00000001755	A1CF	100	93.202	ENSUMAG00000011162	A1CF	99	92.644	Ursus_maritimus
ENSTSYG00000001755	A1CF	92	90.448	ENSVPAG00000006130	A1CF	86	90.448	Vicugna_pacos
ENSTSYG00000001755	A1CF	100	94.737	ENSVVUG00000002504	A1CF	94	94.555	Vulpes_vulpes
ENSTSYG00000001755	A1CF	100	77.128	ENSXETG00000006611	a1cf	94	78.191	Xenopus_tropicalis
ENSTSYG00000001755	A1CF	100	77.113	ENSXCOG00000003302	a1cf	94	77.993	Xiphophorus_couchianus
ENSTSYG00000001755	A1CF	100	76.042	ENSXMAG00000016703	a1cf	94	78.125	Xiphophorus_maculatus