EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000001851 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 17856 bases
Position: chrKE928174.1:8321-26176
Accession: 103272825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000001724	RRM_5	PF13893.6	4.1e-07	1	1
ENSTSYP00000001724	RRM_1	PF00076.22	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000001852	-	1509	XM_008070293	ENSTSYP00000001724	502 (aa)	-	UPI000C2F4E35

Gene Model

Click here to download ENSTSYG00000001851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000001851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000001851	-	100	76.514	ENSG00000160633	SAFB	88	62.500	Homo_sapiens
ENSTSYG00000001851	-	83	46.358	ENSAPOG00000022508	safb	55	44.488	Acanthochromis_polyacanthus
ENSTSYG00000001851	-	50	92.885	ENSAMEG00000012254	SAFB	59	79.065	Ailuropoda_melanoleuca
ENSTSYG00000001851	-	88	45.000	ENSAOCG00000006308	safb	57	47.107	Amphiprion_ocellaris
ENSTSYG00000001851	-	83	46.563	ENSAPEG00000023342	safb	55	44.031	Amphiprion_percula
ENSTSYG00000001851	-	95	42.453	ENSATEG00000004998	safb	54	45.098	Anabas_testudineus
ENSTSYG00000001851	-	76	52.798	ENSACAG00000016893	-	52	55.838	Anolis_carolinensis
ENSTSYG00000001851	-	100	76.881	ENSANAG00000028821	SAFB	63	80.187	Aotus_nancymaae
ENSTSYG00000001851	-	84	43.982	ENSACLG00000001926	safb	57	43.281	Astatotilapia_calliptera
ENSTSYG00000001851	-	100	74.200	ENSBTAG00000007875	SAFB	58	74.388	Bos_taurus
ENSTSYG00000001851	-	100	77.615	ENSCJAG00000017081	SAFB	99	80.748	Callithrix_jacchus
ENSTSYG00000001851	-	53	92.222	ENSCAFG00000018803	SAFB	51	78.987	Canis_familiaris
ENSTSYG00000001851	-	100	75.735	ENSCAFG00020018943	SAFB	58	78.987	Canis_lupus_dingo
ENSTSYG00000001851	-	100	74.200	ENSCHIG00000007262	SAFB	58	74.388	Capra_hircus
ENSTSYG00000001851	-	53	88.519	ENSCPOG00000026322	SAFB	57	76.173	Cavia_porcellus
ENSTSYG00000001851	-	100	77.248	ENSCCAG00000020193	SAFB	63	80.748	Cebus_capucinus
ENSTSYG00000001851	-	100	77.064	ENSCATG00000029994	SAFB	63	80.561	Cercocebus_atys
ENSTSYG00000001851	-	53	88.519	ENSCLAG00000007734	SAFB	57	75.701	Chinchilla_lanigera
ENSTSYG00000001851	-	54	93.040	ENSCSAG00000009949	SAFB	58	80.524	Chlorocebus_sabaeus
ENSTSYG00000001851	-	90	80.488	ENSCHOG00000003208	SAFB	54	80.488	Choloepus_hoffmanni
ENSTSYG00000001851	-	100	53.546	ENSCPBG00000010936	-	63	55.773	Chrysemys_picta_bellii
ENSTSYG00000001851	-	100	57.274	ENSCPBG00000010928	-	64	58.011	Chrysemys_picta_bellii
ENSTSYG00000001851	-	86	85.985	ENSCANG00000004774	-	58	85.985	Colobus_angolensis_palliatus
ENSTSYG00000001851	-	100	77.024	ENSCANG00000019754	-	58	78.517	Colobus_angolensis_palliatus
ENSTSYG00000001851	-	100	72.661	ENSCGRG00001002254	Safb	58	75.655	Cricetulus_griseus_chok1gshd
ENSTSYG00000001851	-	100	68.852	ENSCGRG00000011529	Safb	59	75.655	Cricetulus_griseus_crigri
ENSTSYG00000001851	-	95	43.595	ENSCSEG00000019870	safb	61	45.155	Cynoglossus_semilaevis
ENSTSYG00000001851	-	87	39.749	ENSCVAG00000002226	safb	55	41.296	Cyprinodon_variegatus
ENSTSYG00000001851	-	100	75.416	ENSDNOG00000015746	SAFB	50	78.491	Dasypus_novemcinctus
ENSTSYG00000001851	-	53	93.333	ENSEASG00005023019	SAFB	58	79.104	Equus_asinus_asinus
ENSTSYG00000001851	-	53	93.704	ENSECAG00000018659	SAFB	52	79.550	Equus_caballus
ENSTSYG00000001851	-	95	42.642	ENSELUG00000022327	safb	59	43.178	Esox_lucius
ENSTSYG00000001851	-	100	75.780	ENSFCAG00000011835	SAFB	58	79.026	Felis_catus
ENSTSYG00000001851	-	86	82.576	ENSFDAG00000020306	SAFB	50	82.576	Fukomys_damarensis
ENSTSYG00000001851	-	86	40.552	ENSFHEG00000004219	safb	56	42.063	Fundulus_heteroclitus
ENSTSYG00000001851	-	88	42.268	ENSGAFG00000016162	safb	53	42.515	Gambusia_affinis
ENSTSYG00000001851	-	92	42.043	ENSGACG00000011385	safb	53	42.970	Gasterosteus_aculeatus
ENSTSYG00000001851	-	100	52.134	ENSGAGG00000017702	-	80	52.690	Gopherus_agassizii
ENSTSYG00000001851	-	92	56.867	ENSGAGG00000008424	-	56	57.060	Gopherus_agassizii
ENSTSYG00000001851	-	100	76.514	ENSGGOG00000015109	SAFB	63	80.000	Gorilla_gorilla
ENSTSYG00000001851	-	53	89.630	ENSHGLG00000015883	SAFB	57	77.444	Heterocephalus_glaber_female
ENSTSYG00000001851	-	80	41.124	ENSHCOG00000001705	safb	59	42.553	Hippocampus_comes
ENSTSYG00000001851	-	100	75.138	ENSSTOG00000002783	SAFB	61	78.383	Ictidomys_tridecemlineatus
ENSTSYG00000001851	-	100	73.394	ENSJJAG00000009021	Safb	60	76.164	Jaculus_jaculus
ENSTSYG00000001851	-	85	42.917	ENSKMAG00000022308	safb	53	44.581	Kryptolebias_marmoratus
ENSTSYG00000001851	-	98	68.934	ENSLAFG00000003840	SAFB	58	75.330	Loxodonta_africana
ENSTSYG00000001851	-	100	77.064	ENSMFAG00000003885	SAFB	63	80.561	Macaca_fascicularis
ENSTSYG00000001851	-	100	77.064	ENSMMUG00000017970	SAFB	63	80.561	Macaca_mulatta
ENSTSYG00000001851	-	100	73.578	ENSMNEG00000035637	SAFB	63	77.009	Macaca_nemestrina
ENSTSYG00000001851	-	50	83.721	ENSMLEG00000038637	SAFB	57	75.530	Mandrillus_leucophaeus
ENSTSYG00000001851	-	84	43.982	ENSMZEG00005009120	safb	57	43.281	Maylandia_zebra
ENSTSYG00000001851	-	54	63.251	ENSMGAG00000001051	-	52	59.862	Meleagris_gallopavo
ENSTSYG00000001851	-	90	70.161	ENSMAUG00000005013	Safb	100	73.663	Mesocricetus_auratus
ENSTSYG00000001851	-	54	93.431	ENSMICG00000008739	-	63	80.377	Microcebus_murinus
ENSTSYG00000001851	-	78	74.000	ENSMICG00000046795	-	52	74.000	Microcebus_murinus
ENSTSYG00000001851	-	100	68.852	ENSMOCG00000014040	Safb	57	75.468	Microtus_ochrogaster
ENSTSYG00000001851	-	100	62.655	ENSMODG00000001236	SAFB	59	66.306	Monodelphis_domestica
ENSTSYG00000001851	-	89	43.983	ENSMALG00000020330	safb	52	44.979	Monopterus_albus
ENSTSYG00000001851	-	53	86.667	MGP_CAROLIEiJ_G0021780	Safb	57	75.752	Mus_caroli
ENSTSYG00000001851	-	53	86.667	ENSMUSG00000071054	Safb	57	75.752	Mus_musculus
ENSTSYG00000001851	-	53	86.296	MGP_PahariEiJ_G0020769	Safb	57	75.564	Mus_pahari
ENSTSYG00000001851	-	100	70.438	ENSMPUG00000006123	SAFB	55	78.318	Mustela_putorius_furo
ENSTSYG00000001851	-	100	75.696	ENSMLUG00000001081	SAFB	58	75.696	Myotis_lucifugus
ENSTSYG00000001851	-	100	70.275	ENSNGAG00000019882	Safb	56	73.408	Nannospalax_galili
ENSTSYG00000001851	-	93	76.285	ENSNLEG00000013551	SAFB	61	79.839	Nomascus_leucogenys
ENSTSYG00000001851	-	53	89.259	ENSODEG00000014838	SAFB	57	76.966	Octodon_degus
ENSTSYG00000001851	-	84	43.011	ENSONIG00000002318	safb	57	43.212	Oreochromis_niloticus
ENSTSYG00000001851	-	100	70.632	ENSOCUG00000014628	SAFB	65	70.632	Oryctolagus_cuniculus
ENSTSYG00000001851	-	84	43.696	ENSORLG00000016989	safb	57	41.698	Oryzias_latipes
ENSTSYG00000001851	-	95	42.023	ENSORLG00015010733	safb	58	41.894	Oryzias_latipes_hsok
ENSTSYG00000001851	-	89	41.616	ENSOMEG00000009066	safb	57	41.243	Oryzias_melastigma
ENSTSYG00000001851	-	54	90.975	ENSOGAG00000027769	SAFB	58	78.424	Otolemur_garnettii
ENSTSYG00000001851	-	77	74.425	ENSOARG00000007856	-	54	74.550	Ovis_aries
ENSTSYG00000001851	-	100	73.635	ENSOARG00000007662	-	57	74.053	Ovis_aries
ENSTSYG00000001851	-	100	76.330	ENSPPAG00000035129	SAFB	63	79.813	Pan_paniscus
ENSTSYG00000001851	-	100	75.780	ENSPPRG00000017197	SAFB	58	79.026	Panthera_pardus
ENSTSYG00000001851	-	100	76.330	ENSPTRG00000010335	SAFB	63	79.813	Pan_troglodytes
ENSTSYG00000001851	-	100	77.248	ENSPANG00000007770	SAFB	63	80.561	Papio_anubis
ENSTSYG00000001851	-	100	52.297	ENSPSIG00000009367	-	60	53.180	Pelodiscus_sinensis
ENSTSYG00000001851	-	100	54.919	ENSPSIG00000011679	-	63	55.098	Pelodiscus_sinensis
ENSTSYG00000001851	-	100	72.294	ENSPEMG00000020428	Safb	57	75.468	Peromyscus_maniculatus_bairdii
ENSTSYG00000001851	-	100	64.727	ENSPCIG00000009504	-	99	68.813	Phascolarctos_cinereus
ENSTSYG00000001851	-	88	40.206	ENSPFOG00000007745	safb	56	43.046	Poecilia_formosa
ENSTSYG00000001851	-	88	40.206	ENSPLAG00000001614	safb	53	42.942	Poecilia_latipinna
ENSTSYG00000001851	-	91	42.041	ENSPMEG00000021023	safb	57	43.293	Poecilia_mexicana
ENSTSYG00000001851	-	88	40.619	ENSPREG00000012496	safb	54	43.114	Poecilia_reticulata
ENSTSYG00000001851	-	54	93.040	ENSPPYG00000009428	SAFB	58	80.639	Pongo_abelii
ENSTSYG00000001851	-	100	68.421	ENSPCAG00000006475	SAFB	58	69.231	Procavia_capensis
ENSTSYG00000001851	-	100	76.880	ENSPCOG00000014090	SAFB	63	77.170	Propithecus_coquereli
ENSTSYG00000001851	-	100	75.468	ENSPVAG00000004913	SAFB	58	76.217	Pteropus_vampyrus
ENSTSYG00000001851	-	97	66.541	ENSRNOG00000050543	Safb	62	75.530	Rattus_norvegicus
ENSTSYG00000001851	-	54	93.066	ENSRBIG00000042509	SAFB	67	76.616	Rhinopithecus_bieti
ENSTSYG00000001851	-	100	76.881	ENSRROG00000029278	SAFB	63	80.374	Rhinopithecus_roxellana
ENSTSYG00000001851	-	100	77.248	ENSSBOG00000026291	SAFB	63	80.748	Saimiri_boliviensis_boliviensis
ENSTSYG00000001851	-	90	43.636	ENSSLDG00000001670	safb	55	44.336	Seriola_lalandi_dorsalis
ENSTSYG00000001851	-	53	86.989	ENSSARG00000010475	SAFB	62	73.308	Sorex_araneus
ENSTSYG00000001851	-	99	42.125	ENSSPAG00000015682	safb	63	44.706	Stegastes_partitus
ENSTSYG00000001851	-	100	70.620	ENSSSCG00000013522	SAFB	54	78.424	Sus_scrofa
ENSTSYG00000001851	-	92	43.141	ENSTRUG00000003567	safb	57	45.257	Takifugu_rubripes
ENSTSYG00000001851	-	80	48.578	ENSTNIG00000015470	safb	52	48.951	Tetraodon_nigroviridis
ENSTSYG00000001851	-	100	76.938	ENSTTRG00000013588	SAFB	58	77.925	Tursiops_truncatus
ENSTSYG00000001851	-	100	76.103	ENSUAMG00000024543	SAFB	69	79.362	Ursus_americanus
ENSTSYG00000001851	-	81	94.248	ENSUMAG00000009734	SAFB	51	94.468	Ursus_maritimus
ENSTSYG00000001851	-	53	92.222	ENSVVUG00000013720	SAFB	51	78.692	Vulpes_vulpes
ENSTSYG00000001851	-	93	40.120	ENSXMAG00000003458	safb	55	42.545	Xiphophorus_maculatus