EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000001918 (Gene tree)
Gene ID: -
Gene Symbol: UPF3A
Alias: HUPF3A|RENT3A|UPF3
Full Name: regulator of nonsense transcripts 3A-like
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 17777 bases
Position: chrKE936539.1:2047-19823
Accession: 103256639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000016505	Smg4_UPF3	PF03467.15	1e-34	1	1
ENSTSYP00000001776	Smg4_UPF3	PF03467.15	9.4e-13	1	2
ENSTSYP00000001776	Smg4_UPF3	PF03467.15	9.4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000039116	UPF3A-201	1083	XM_008054455	ENSTSYP00000016505	361 (aa)	-	UPI000C2F52DA
ENSTSYT00000001914	UPF3A-202	984	-	ENSTSYP00000001776	328 (aa)	-	UPI000C2F76FA

Gene Model

Click here to download ENSTSYG00000001918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000001918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000001918	UPF3A	100	69.761	ENSG00000169062	UPF3A	77	69.761	Homo_sapiens
ENSTSYG00000001918	UPF3A	99	54.400	ENSAPOG00000013484	upf3a	75	54.400	Acanthochromis_polyacanthus
ENSTSYG00000001918	UPF3A	100	66.925	ENSAMEG00000004259	UPF3A	82	66.925	Ailuropoda_melanoleuca
ENSTSYG00000001918	UPF3A	99	51.680	ENSACIG00000020468	upf3a	77	51.688	Amphilophus_citrinellus
ENSTSYG00000001918	UPF3A	99	54.400	ENSAOCG00000020784	upf3a	75	54.400	Amphiprion_ocellaris
ENSTSYG00000001918	UPF3A	99	54.400	ENSAPEG00000003519	upf3a	75	54.400	Amphiprion_percula
ENSTSYG00000001918	UPF3A	99	56.201	ENSATEG00000005843	upf3a	76	56.201	Anabas_testudineus
ENSTSYG00000001918	UPF3A	93	61.254	ENSACAG00000001540	UPF3A	82	61.254	Anolis_carolinensis
ENSTSYG00000001918	UPF3A	100	65.252	ENSANAG00000021713	UPF3A	77	64.894	Aotus_nancymaae
ENSTSYG00000001918	UPF3A	98	38.667	ENSANAG00000025598	-	77	40.933	Aotus_nancymaae
ENSTSYG00000001918	UPF3A	99	53.488	ENSACLG00000026274	upf3a	76	53.506	Astatotilapia_calliptera
ENSTSYG00000001918	UPF3A	95	54.972	ENSAMXG00000002608	upf3a	75	53.562	Astyanax_mexicanus
ENSTSYG00000001918	UPF3A	100	67.109	ENSCJAG00000019102	UPF3A	76	67.109	Callithrix_jacchus
ENSTSYG00000001918	UPF3A	96	67.033	ENSCAFG00000006504	UPF3A	76	66.851	Canis_familiaris
ENSTSYG00000001918	UPF3A	96	67.308	ENSCAFG00020014268	UPF3A	74	67.127	Canis_lupus_dingo
ENSTSYG00000001918	UPF3A	87	34.848	ENSCHIG00000011454	-	69	32.609	Capra_hircus
ENSTSYG00000001918	UPF3A	100	62.667	ENSCHIG00000008682	UPF3A	72	62.667	Capra_hircus
ENSTSYG00000001918	UPF3A	79	66.337	ENSCPOG00000006824	UPF3A	70	66.337	Cavia_porcellus
ENSTSYG00000001918	UPF3A	100	67.905	ENSCCAG00000018406	UPF3A	77	67.905	Cebus_capucinus
ENSTSYG00000001918	UPF3A	100	68.883	ENSCATG00000029733	UPF3A	76	68.883	Cercocebus_atys
ENSTSYG00000001918	UPF3A	100	68.338	ENSCSAG00000017388	UPF3A	76	68.338	Chlorocebus_sabaeus
ENSTSYG00000001918	UPF3A	73	94.366	ENSCHOG00000006918	-	62	81.818	Choloepus_hoffmanni
ENSTSYG00000001918	UPF3A	87	65.337	ENSCGRG00001017387	Upf3a	74	65.337	Cricetulus_griseus_chok1gshd
ENSTSYG00000001918	UPF3A	87	65.337	ENSCGRG00000001468	Upf3a	74	65.337	Cricetulus_griseus_crigri
ENSTSYG00000001918	UPF3A	50	54.839	ENSCGRG00000007627	Upf3b	83	43.132	Cricetulus_griseus_crigri
ENSTSYG00000001918	UPF3A	93	45.503	ENSCSEG00000002046	upf3b	76	45.478	Cynoglossus_semilaevis
ENSTSYG00000001918	UPF3A	99	53.867	ENSCSEG00000005106	upf3a	76	53.619	Cynoglossus_semilaevis
ENSTSYG00000001918	UPF3A	99	52.688	ENSCVAG00000022333	upf3a	75	52.815	Cyprinodon_variegatus
ENSTSYG00000001918	UPF3A	95	55.211	ENSDARG00000069297	upf3a	74	55.211	Danio_rerio
ENSTSYG00000001918	UPF3A	84	70.978	ENSDNOG00000034391	UPF3A	71	70.978	Dasypus_novemcinctus
ENSTSYG00000001918	UPF3A	91	64.451	ENSETEG00000010110	UPF3A	70	64.451	Echinops_telfairi
ENSTSYG00000001918	UPF3A	100	66.667	ENSEASG00005021884	UPF3A	78	66.667	Equus_asinus_asinus
ENSTSYG00000001918	UPF3A	100	66.931	ENSECAG00000017141	UPF3A	78	66.931	Equus_caballus
ENSTSYG00000001918	UPF3A	99	55.556	ENSELUG00000011050	upf3a	76	55.556	Esox_lucius
ENSTSYG00000001918	UPF3A	100	64.908	ENSFCAG00000014602	UPF3A	77	64.908	Felis_catus
ENSTSYG00000001918	UPF3A	58	54.464	ENSGMOG00000001621	upf3b	80	42.250	Gadus_morhua
ENSTSYG00000001918	UPF3A	74	60.424	ENSGMOG00000019615	upf3a	85	60.424	Gadus_morhua
ENSTSYG00000001918	UPF3A	58	47.032	ENSGACG00000017435	upf3b	83	41.481	Gasterosteus_aculeatus
ENSTSYG00000001918	UPF3A	74	61.071	ENSGACG00000001972	upf3a	84	60.638	Gasterosteus_aculeatus
ENSTSYG00000001918	UPF3A	100	63.953	ENSGGOG00000043074	-	76	63.584	Gorilla_gorilla
ENSTSYG00000001918	UPF3A	100	63.953	ENSGGOG00000041219	-	81	63.584	Gorilla_gorilla
ENSTSYG00000001918	UPF3A	100	70.027	ENSGGOG00000015428	UPF3A	77	70.027	Gorilla_gorilla
ENSTSYG00000001918	UPF3A	99	54.400	ENSHBUG00000011325	upf3a	75	54.424	Haplochromis_burtoni
ENSTSYG00000001918	UPF3A	74	67.500	ENSHGLG00000001544	UPF3A	64	67.500	Heterocephalus_glaber_female
ENSTSYG00000001918	UPF3A	74	67.500	ENSHGLG00100013244	UPF3A	64	67.500	Heterocephalus_glaber_male
ENSTSYG00000001918	UPF3A	94	43.094	ENSHCOG00000017004	upf3b	77	44.536	Hippocampus_comes
ENSTSYG00000001918	UPF3A	52	60.963	ENSIPUG00000019249	upf3b	83	43.627	Ictalurus_punctatus
ENSTSYG00000001918	UPF3A	95	54.674	ENSIPUG00000023450	upf3a	75	53.243	Ictalurus_punctatus
ENSTSYG00000001918	UPF3A	99	53.723	ENSKMAG00000004381	upf3a	75	53.989	Kryptolebias_marmoratus
ENSTSYG00000001918	UPF3A	84	40.717	ENSLACG00000006645	UPF3A	73	52.294	Latimeria_chalumnae
ENSTSYG00000001918	UPF3A	50	61.979	ENSLOCG00000015238	upf3b	82	47.090	Lepisosteus_oculatus
ENSTSYG00000001918	UPF3A	95	55.402	ENSLOCG00000002665	upf3a	74	56.233	Lepisosteus_oculatus
ENSTSYG00000001918	UPF3A	96	51.414	ENSLAFG00000023358	UPF3A	87	51.554	Loxodonta_africana
ENSTSYG00000001918	UPF3A	100	68.097	ENSMFAG00000045016	UPF3A	76	68.097	Macaca_fascicularis
ENSTSYG00000001918	UPF3A	92	70.145	ENSMMUG00000007449	UPF3A	79	68.883	Macaca_mulatta
ENSTSYG00000001918	UPF3A	100	69.149	ENSMNEG00000036402	UPF3A	75	69.149	Macaca_nemestrina
ENSTSYG00000001918	UPF3A	100	68.617	ENSMLEG00000014726	UPF3A	88	66.181	Mandrillus_leucophaeus
ENSTSYG00000001918	UPF3A	99	54.145	ENSMAMG00000018364	upf3a	77	54.404	Mastacembelus_armatus
ENSTSYG00000001918	UPF3A	99	53.488	ENSMZEG00005021571	upf3a	76	53.506	Maylandia_zebra
ENSTSYG00000001918	UPF3A	100	59.690	ENSMGAG00000014837	UPF3A	94	59.690	Meleagris_gallopavo
ENSTSYG00000001918	UPF3A	55	79.412	ENSMOCG00000000550	Upf3a	57	79.412	Microtus_ochrogaster
ENSTSYG00000001918	UPF3A	94	55.647	ENSMMOG00000019751	upf3a	72	55.647	Mola_mola
ENSTSYG00000001918	UPF3A	100	61.735	ENSMODG00000003159	UPF3A	89	61.735	Monodelphis_domestica
ENSTSYG00000001918	UPF3A	87	65.015	MGP_CAROLIEiJ_G0030848	Upf3a	73	64.706	Mus_caroli
ENSTSYG00000001918	UPF3A	87	65.031	ENSMUSG00000038398	Upf3a	74	64.724	Mus_musculus
ENSTSYG00000001918	UPF3A	87	65.031	MGP_PahariEiJ_G0021311	Upf3a	74	65.031	Mus_pahari
ENSTSYG00000001918	UPF3A	87	64.724	MGP_SPRETEiJ_G0031958	Upf3a	74	64.417	Mus_spretus
ENSTSYG00000001918	UPF3A	97	65.651	ENSMPUG00000009139	UPF3A	77	63.613	Mustela_putorius_furo
ENSTSYG00000001918	UPF3A	100	65.051	ENSMLUG00000015905	UPF3A	90	65.051	Myotis_lucifugus
ENSTSYG00000001918	UPF3A	87	67.890	ENSNGAG00000019314	Upf3a	75	67.890	Nannospalax_galili
ENSTSYG00000001918	UPF3A	99	54.400	ENSNBRG00000000828	upf3a	75	54.424	Neolamprologus_brichardi
ENSTSYG00000001918	UPF3A	100	69.496	ENSNLEG00000007563	UPF3A	77	69.496	Nomascus_leucogenys
ENSTSYG00000001918	UPF3A	100	36.683	ENSOANG00000002594	-	88	36.294	Ornithorhynchus_anatinus
ENSTSYG00000001918	UPF3A	86	62.081	ENSOANG00000006985	-	84	62.081	Ornithorhynchus_anatinus
ENSTSYG00000001918	UPF3A	100	57.373	ENSOCUG00000008450	UPF3A	76	57.373	Oryctolagus_cuniculus
ENSTSYG00000001918	UPF3A	99	54.011	ENSORLG00000010911	upf3a	76	54.768	Oryzias_latipes
ENSTSYG00000001918	UPF3A	52	50.265	ENSORLG00020003758	upf3b	78	41.602	Oryzias_latipes_hni
ENSTSYG00000001918	UPF3A	99	51.507	ENSORLG00020014317	upf3a	75	52.186	Oryzias_latipes_hni
ENSTSYG00000001918	UPF3A	99	53.351	ENSOMEG00000014425	upf3a	75	53.495	Oryzias_melastigma
ENSTSYG00000001918	UPF3A	74	69.792	ENSOGAG00000004788	UPF3A	68	69.792	Otolemur_garnettii
ENSTSYG00000001918	UPF3A	96	66.116	ENSOARG00000009004	UPF3A	74	66.116	Ovis_aries
ENSTSYG00000001918	UPF3A	93	35.860	ENSOARG00000007869	-	79	33.333	Ovis_aries
ENSTSYG00000001918	UPF3A	100	69.415	ENSPPAG00000042267	UPF3A	77	69.415	Pan_paniscus
ENSTSYG00000001918	UPF3A	100	65.699	ENSPPRG00000025062	UPF3A	77	65.699	Panthera_pardus
ENSTSYG00000001918	UPF3A	100	60.465	ENSPTRG00000041835	-	81	58.651	Pan_troglodytes
ENSTSYG00000001918	UPF3A	100	69.415	ENSPTRG00000006073	UPF3A	77	69.415	Pan_troglodytes
ENSTSYG00000001918	UPF3A	100	62.791	ENSPTRG00000041187	-	81	62.791	Pan_troglodytes
ENSTSYG00000001918	UPF3A	100	60.465	ENSPTRG00000051640	-	81	60.465	Pan_troglodytes
ENSTSYG00000001918	UPF3A	100	69.681	ENSPANG00000004346	UPF3A	76	69.681	Papio_anubis
ENSTSYG00000001918	UPF3A	99	43.108	ENSPKIG00000019226	upf3b	83	42.963	Paramormyrops_kingsleyae
ENSTSYG00000001918	UPF3A	99	51.015	ENSPKIG00000004422	upf3a	85	50.891	Paramormyrops_kingsleyae
ENSTSYG00000001918	UPF3A	100	60.053	ENSPSIG00000007468	UPF3A	89	60.053	Pelodiscus_sinensis
ENSTSYG00000001918	UPF3A	98	53.034	ENSPMGG00000012696	upf3a	75	53.034	Periophthalmus_magnuspinnatus
ENSTSYG00000001918	UPF3A	87	66.972	ENSPEMG00000019968	-	74	66.972	Peromyscus_maniculatus_bairdii
ENSTSYG00000001918	UPF3A	84	74.510	ENSPCIG00000019590	-	66	85.833	Phascolarctos_cinereus
ENSTSYG00000001918	UPF3A	99	52.703	ENSPFOG00000013222	upf3a	75	53.369	Poecilia_formosa
ENSTSYG00000001918	UPF3A	99	51.752	ENSPLAG00000011960	upf3a	76	51.752	Poecilia_latipinna
ENSTSYG00000001918	UPF3A	99	51.451	ENSPMEG00000000836	upf3a	76	51.451	Poecilia_mexicana
ENSTSYG00000001918	UPF3A	100	69.761	ENSPPYG00000005536	UPF3A	77	69.761	Pongo_abelii
ENSTSYG00000001918	UPF3A	100	60.422	ENSPVAG00000005656	UPF3A	77	60.422	Pteropus_vampyrus
ENSTSYG00000001918	UPF3A	99	53.488	ENSPNYG00000011289	upf3a	76	53.506	Pundamilia_nyererei
ENSTSYG00000001918	UPF3A	99	53.600	ENSPNAG00000019532	upf3a	75	53.562	Pygocentrus_nattereri
ENSTSYG00000001918	UPF3A	99	42.327	ENSPNAG00000021528	upf3b	83	44.686	Pygocentrus_nattereri
ENSTSYG00000001918	UPF3A	80	65.993	ENSRNOG00000017397	Upf3a	71	66.221	Rattus_norvegicus
ENSTSYG00000001918	UPF3A	100	69.149	ENSRBIG00000034007	UPF3A	81	69.149	Rhinopithecus_bieti
ENSTSYG00000001918	UPF3A	100	69.149	ENSRROG00000012212	UPF3A	76	69.149	Rhinopithecus_roxellana
ENSTSYG00000001918	UPF3A	100	67.639	ENSSBOG00000029989	UPF3A	83	67.639	Saimiri_boliviensis_boliviensis
ENSTSYG00000001918	UPF3A	96	63.881	ENSSHAG00000009895	UPF3A	86	63.881	Sarcophilus_harrisii
ENSTSYG00000001918	UPF3A	59	58.333	ENSSFOG00015005614	upf3b	83	44.140	Scleropages_formosus
ENSTSYG00000001918	UPF3A	94	53.409	ENSSFOG00015021851	upf3a	71	53.125	Scleropages_formosus
ENSTSYG00000001918	UPF3A	52	61.376	ENSSMAG00000012913	upf3b	77	42.408	Scophthalmus_maximus
ENSTSYG00000001918	UPF3A	99	52.332	ENSSMAG00000003858	upf3a	75	52.185	Scophthalmus_maximus
ENSTSYG00000001918	UPF3A	99	53.886	ENSSDUG00000009680	upf3a	77	53.866	Seriola_dumerili
ENSTSYG00000001918	UPF3A	99	54.881	ENSSLDG00000009700	upf3a	76	54.881	Seriola_lalandi_dorsalis
ENSTSYG00000001918	UPF3A	87	61.890	ENSSARG00000007262	UPF3A	79	57.567	Sorex_araneus
ENSTSYG00000001918	UPF3A	52	62.434	ENSSPAG00000009989	upf3b	80	44.987	Stegastes_partitus
ENSTSYG00000001918	UPF3A	100	65.455	ENSSSCG00000024679	UPF3A	75	65.455	Sus_scrofa
ENSTSYG00000001918	UPF3A	93	63.818	ENSTGUG00000009493	UPF3A	86	63.818	Taeniopygia_guttata
ENSTSYG00000001918	UPF3A	98	51.337	ENSTRUG00000012730	upf3a	75	51.087	Takifugu_rubripes
ENSTSYG00000001918	UPF3A	94	44.193	ENSTNIG00000014973	upf3a	85	44.476	Tetraodon_nigroviridis
ENSTSYG00000001918	UPF3A	86	58.282	ENSTBEG00000017186	-	98	58.589	Tupaia_belangeri
ENSTSYG00000001918	UPF3A	100	62.698	ENSTTRG00000015414	UPF3A	77	62.698	Tursiops_truncatus
ENSTSYG00000001918	UPF3A	95	65.266	ENSVPAG00000003525	UPF3A	84	65.266	Vicugna_pacos
ENSTSYG00000001918	UPF3A	96	66.022	ENSVVUG00000013538	UPF3A	71	66.022	Vulpes_vulpes
ENSTSYG00000001918	UPF3A	96	39.370	ENSXETG00000007440	upf3b	81	39.164	Xenopus_tropicalis
ENSTSYG00000001918	UPF3A	93	49.284	ENSXETG00000002572	upf3a	78	48.433	Xenopus_tropicalis
ENSTSYG00000001918	UPF3A	99	53.351	ENSXMAG00000013452	upf3a	75	53.351	Xiphophorus_maculatus