EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000002667 (Gene tree)
Gene ID: 103276968
Gene Symbol: SMG7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 82119 bases
Position: chrKE950620.1:1334217-1416335
Accession: 103276968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000019851	EST1	PF10374.9	9.8e-26	1	1
ENSTSYP00000030533	EST1	PF10374.9	1e-25	1	1
ENSTSYP00000017510	EST1	PF10374.9	1.2e-25	1	1
ENSTSYP00000002471	EST1	PF10374.9	1.2e-25	1	1
ENSTSYP00000017820	EST1	PF10374.9	2.4e-22	1	1
ENSTSYP00000019851	EST1_DNA_bind	PF10373.9	5.7e-55	1	1
ENSTSYP00000030533	EST1_DNA_bind	PF10373.9	5.8e-55	1	1
ENSTSYP00000017510	EST1_DNA_bind	PF10373.9	6e-55	1	1
ENSTSYP00000002471	EST1_DNA_bind	PF10373.9	6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000039431	SMG7-204	5788	XM_008074418	ENSTSYP00000017510	1170 (aa)	XP_008072611	A0A1U7V312
ENSTSYT00000038662	SMG7-206	585	-	ENSTSYP00000017820	194 (aa)	-	UPI000C2F4830
ENSTSYT00000002684	SMG7-205	3534	-	ENSTSYP00000002471	1177 (aa)	-	UPI000C2F3C45
ENSTSYT00000030370	SMG7-202	6044	XM_021707197	ENSTSYP00000030533	1145 (aa)	XP_021562872	UPI000B529E57
ENSTSYT00000045917	SMG7-203	219	-	ENSTSYP00000028733	73 (aa)	-	UPI0001D3BD71
ENSTSYT00000041848	SMG7-201	5914	XM_008074419	ENSTSYP00000019851	1137 (aa)	XP_008072610	A0A1U7UK44

Gene Model

Click here to download ENSTSYG00000002667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000002667's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000002667	SMG7	100	97.449	ENSG00000116698	SMG7	100	98.667	Homo_sapiens
ENSTSYG00000002667	SMG7	81	94.268	ENSAPOG00000009611	smg7	95	74.281	Acanthochromis_polyacanthus
ENSTSYG00000002667	SMG7	100	95.459	ENSAMEG00000002357	SMG7	100	95.371	Ailuropoda_melanoleuca
ENSTSYG00000002667	SMG7	100	61.254	ENSACIG00000015152	smg7	100	64.528	Amphilophus_citrinellus
ENSTSYG00000002667	SMG7	80	94.194	ENSAOCG00000013538	smg7	99	66.838	Amphiprion_ocellaris
ENSTSYG00000002667	SMG7	80	94.194	ENSAPEG00000007851	smg7	99	66.695	Amphiprion_percula
ENSTSYG00000002667	SMG7	80	94.231	ENSATEG00000006931	smg7	99	66.129	Anabas_testudineus
ENSTSYG00000002667	SMG7	100	88.714	ENSAPLG00000015811	SMG7	100	88.714	Anas_platyrhynchos
ENSTSYG00000002667	SMG7	100	87.186	ENSACAG00000014989	SMG7	100	83.793	Anolis_carolinensis
ENSTSYG00000002667	SMG7	100	97.098	ENSANAG00000028114	SMG7	100	97.098	Aotus_nancymaae
ENSTSYG00000002667	SMG7	81	94.268	ENSACLG00000022079	smg7	99	66.237	Astatotilapia_calliptera
ENSTSYG00000002667	SMG7	80	94.194	ENSAMXG00000020809	smg7	99	68.142	Astyanax_mexicanus
ENSTSYG00000002667	SMG7	100	95.385	ENSBTAG00000008003	SMG7	100	95.385	Bos_taurus
ENSTSYG00000002667	SMG7	100	97.186	ENSCJAG00000005135	SMG7	100	97.186	Callithrix_jacchus
ENSTSYG00000002667	SMG7	100	96.581	ENSCAFG00000013276	SMG7	100	96.581	Canis_familiaris
ENSTSYG00000002667	SMG7	100	96.581	ENSCAFG00020015475	SMG7	100	96.581	Canis_lupus_dingo
ENSTSYG00000002667	SMG7	97	95.322	ENSCHIG00000018192	SMG7	99	95.322	Capra_hircus
ENSTSYG00000002667	SMG7	99	96.741	ENSCPOG00000008906	SMG7	100	96.741	Cavia_porcellus
ENSTSYG00000002667	SMG7	100	97.274	ENSCCAG00000028596	SMG7	100	97.274	Cebus_capucinus
ENSTSYG00000002667	SMG7	100	97.449	ENSCATG00000011063	SMG7	100	97.449	Cercocebus_atys
ENSTSYG00000002667	SMG7	100	96.239	ENSCLAG00000010751	SMG7	100	96.258	Chinchilla_lanigera
ENSTSYG00000002667	SMG7	100	97.350	ENSCSAG00000012654	SMG7	100	97.350	Chlorocebus_sabaeus
ENSTSYG00000002667	SMG7	94	86.750	ENSCHOG00000010522	SMG7	99	87.108	Choloepus_hoffmanni
ENSTSYG00000002667	SMG7	100	91.297	ENSCPBG00000015724	SMG7	100	91.148	Chrysemys_picta_bellii
ENSTSYG00000002667	SMG7	79	52.174	ENSCING00000006953	-	94	53.770	Ciona_intestinalis
ENSTSYG00000002667	SMG7	100	97.293	ENSCANG00000015680	SMG7	100	97.293	Colobus_angolensis_palliatus
ENSTSYG00000002667	SMG7	99	95.197	ENSCGRG00001013705	Smg7	100	95.197	Cricetulus_griseus_chok1gshd
ENSTSYG00000002667	SMG7	98	95.213	ENSCGRG00000018401	Smg7	100	95.213	Cricetulus_griseus_crigri
ENSTSYG00000002667	SMG7	81	89.809	ENSCSEG00000007392	-	91	88.199	Cynoglossus_semilaevis
ENSTSYG00000002667	SMG7	97	69.500	ENSCVAG00000011842	smg7	99	69.500	Cyprinodon_variegatus
ENSTSYG00000002667	SMG7	80	94.839	ENSDARG00000060767	smg7	99	67.734	Danio_rerio
ENSTSYG00000002667	SMG7	98	96.258	ENSDORG00000007331	Smg7	100	96.258	Dipodomys_ordii
ENSTSYG00000002667	SMG7	94	95.438	ENSETEG00000002654	SMG7	99	95.525	Echinops_telfairi
ENSTSYG00000002667	SMG7	100	97.009	ENSEASG00005006524	SMG7	100	97.009	Equus_asinus_asinus
ENSTSYG00000002667	SMG7	100	97.094	ENSECAG00000004313	SMG7	100	97.094	Equus_caballus
ENSTSYG00000002667	SMG7	98	92.721	ENSEEUG00000002024	SMG7	98	92.721	Erinaceus_europaeus
ENSTSYG00000002667	SMG7	80	94.231	ENSELUG00000010293	smg7	99	65.752	Esox_lucius
ENSTSYG00000002667	SMG7	99	96.835	ENSFCAG00000010900	SMG7	100	96.835	Felis_catus
ENSTSYG00000002667	SMG7	100	85.764	ENSFALG00000003047	SMG7	98	85.764	Ficedula_albicollis
ENSTSYG00000002667	SMG7	97	96.552	ENSFDAG00000012121	SMG7	99	96.435	Fukomys_damarensis
ENSTSYG00000002667	SMG7	80	90.968	ENSFHEG00000011073	smg7	99	63.969	Fundulus_heteroclitus
ENSTSYG00000002667	SMG7	80	91.613	ENSGMOG00000004916	smg7	92	66.715	Gadus_morhua
ENSTSYG00000002667	SMG7	100	89.073	ENSGALG00000004667	SMG7	100	89.073	Gallus_gallus
ENSTSYG00000002667	SMG7	92	84.066	ENSGAFG00000019000	smg7	99	63.863	Gambusia_affinis
ENSTSYG00000002667	SMG7	80	92.903	ENSGACG00000001634	smg7	99	64.799	Gasterosteus_aculeatus
ENSTSYG00000002667	SMG7	81	96.835	ENSGAGG00000024208	-	86	95.062	Gopherus_agassizii
ENSTSYG00000002667	SMG7	100	97.361	ENSGGOG00000002342	SMG7	100	97.361	Gorilla_gorilla
ENSTSYG00000002667	SMG7	81	94.268	ENSHBUG00000003726	smg7	98	67.485	Haplochromis_burtoni
ENSTSYG00000002667	SMG7	100	96.570	ENSHGLG00000009353	SMG7	100	96.613	Heterocephalus_glaber_female
ENSTSYG00000002667	SMG7	97	88.614	ENSHGLG00100004878	-	99	88.614	Heterocephalus_glaber_male
ENSTSYG00000002667	SMG7	100	96.658	ENSHGLG00100009637	-	100	96.658	Heterocephalus_glaber_male
ENSTSYG00000002667	SMG7	88	80.233	ENSHCOG00000012804	-	92	81.395	Hippocampus_comes
ENSTSYG00000002667	SMG7	80	94.194	ENSIPUG00000016997	smg7	99	68.614	Ictalurus_punctatus
ENSTSYG00000002667	SMG7	98	97.128	ENSSTOG00000000401	SMG7	100	97.128	Ictidomys_tridecemlineatus
ENSTSYG00000002667	SMG7	89	86.127	ENSJJAG00000000309	-	98	86.127	Jaculus_jaculus
ENSTSYG00000002667	SMG7	97	94.881	ENSJJAG00000012351	Smg7	99	94.881	Jaculus_jaculus
ENSTSYG00000002667	SMG7	78	84.211	ENSKMAG00000004900	smg7	97	70.000	Kryptolebias_marmoratus
ENSTSYG00000002667	SMG7	52	62.500	ENSLBEG00000005220	-	75	64.098	Labrus_bergylta
ENSTSYG00000002667	SMG7	82	91.824	ENSLBEG00000002983	smg7	99	66.264	Labrus_bergylta
ENSTSYG00000002667	SMG7	82	93.750	ENSLACG00000000972	SMG7	99	75.455	Latimeria_chalumnae
ENSTSYG00000002667	SMG7	80	95.513	ENSLOCG00000002010	smg7	99	67.559	Lepisosteus_oculatus
ENSTSYG00000002667	SMG7	98	96.867	ENSLAFG00000008186	SMG7	100	96.867	Loxodonta_africana
ENSTSYG00000002667	SMG7	100	97.350	ENSMFAG00000031653	SMG7	100	97.350	Macaca_fascicularis
ENSTSYG00000002667	SMG7	100	97.436	ENSMMUG00000018458	SMG7	100	97.436	Macaca_mulatta
ENSTSYG00000002667	SMG7	100	97.449	ENSMNEG00000034798	SMG7	100	97.449	Macaca_nemestrina
ENSTSYG00000002667	SMG7	100	97.449	ENSMLEG00000037170	SMG7	100	97.449	Mandrillus_leucophaeus
ENSTSYG00000002667	SMG7	80	93.548	ENSMAMG00000018733	smg7	85	65.280	Mastacembelus_armatus
ENSTSYG00000002667	SMG7	81	94.268	ENSMZEG00005015247	smg7	99	65.812	Maylandia_zebra
ENSTSYG00000002667	SMG7	97	88.859	ENSMGAG00000001561	SMG7	98	88.859	Meleagris_gallopavo
ENSTSYG00000002667	SMG7	100	94.635	ENSMAUG00000019484	Smg7	100	95.648	Mesocricetus_auratus
ENSTSYG00000002667	SMG7	100	97.713	ENSMICG00000007145	SMG7	100	97.824	Microcebus_murinus
ENSTSYG00000002667	SMG7	100	94.635	ENSMOCG00000020748	Smg7	100	95.648	Microtus_ochrogaster
ENSTSYG00000002667	SMG7	82	91.195	ENSMMOG00000001524	smg7	99	64.416	Mola_mola
ENSTSYG00000002667	SMG7	92	92.410	ENSMODG00000007139	SMG7	99	92.410	Monodelphis_domestica
ENSTSYG00000002667	SMG7	80	94.194	ENSMALG00000000061	smg7	94	69.154	Monopterus_albus
ENSTSYG00000002667	SMG7	100	94.371	MGP_CAROLIEiJ_G0014704	Smg7	100	95.039	Mus_caroli
ENSTSYG00000002667	SMG7	100	94.195	ENSMUSG00000042772	Smg7	100	95.126	Mus_musculus
ENSTSYG00000002667	SMG7	100	94.283	MGP_PahariEiJ_G0027940	Smg7	100	95.126	Mus_pahari
ENSTSYG00000002667	SMG7	100	94.283	MGP_SPRETEiJ_G0015511	Smg7	100	95.213	Mus_spretus
ENSTSYG00000002667	SMG7	100	92.576	ENSMPUG00000011732	SMG7	97	96.435	Mustela_putorius_furo
ENSTSYG00000002667	SMG7	97	96.117	ENSMLUG00000015417	SMG7	99	96.117	Myotis_lucifugus
ENSTSYG00000002667	SMG7	100	95.427	ENSNGAG00000009836	Smg7	100	95.735	Nannospalax_galili
ENSTSYG00000002667	SMG7	98	61.391	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSTSYG00000002667	SMG7	100	97.625	ENSNLEG00000018018	SMG7	100	97.625	Nomascus_leucogenys
ENSTSYG00000002667	SMG7	71	93.089	ENSMEUG00000004681	SMG7	73	93.089	Notamacropus_eugenii
ENSTSYG00000002667	SMG7	99	80.548	ENSOPRG00000013942	SMG7	96	83.836	Ochotona_princeps
ENSTSYG00000002667	SMG7	100	96.306	ENSODEG00000010390	SMG7	100	96.432	Octodon_degus
ENSTSYG00000002667	SMG7	80	94.194	ENSONIG00000000277	smg7	99	65.839	Oreochromis_niloticus
ENSTSYG00000002667	SMG7	100	87.304	ENSOANG00000000994	SMG7	100	90.780	Ornithorhynchus_anatinus
ENSTSYG00000002667	SMG7	100	89.145	ENSOCUG00000005887	SMG7	95	89.316	Oryctolagus_cuniculus
ENSTSYG00000002667	SMG7	95	81.622	ENSORLG00000007314	smg7	84	81.622	Oryzias_latipes
ENSTSYG00000002667	SMG7	85	87.879	ENSORLG00020015779	smg7	78	85.882	Oryzias_latipes_hni
ENSTSYG00000002667	SMG7	87	85.882	ENSORLG00015012289	smg7	99	63.629	Oryzias_latipes_hsok
ENSTSYG00000002667	SMG7	80	92.258	ENSOMEG00000002328	smg7	99	62.969	Oryzias_melastigma
ENSTSYG00000002667	SMG7	99	93.151	ENSOGAG00000003107	SMG7	99	93.065	Otolemur_garnettii
ENSTSYG00000002667	SMG7	100	95.214	ENSOARG00000001352	SMG7	100	95.214	Ovis_aries
ENSTSYG00000002667	SMG7	100	97.625	ENSPPAG00000031619	SMG7	100	97.625	Pan_paniscus
ENSTSYG00000002667	SMG7	100	97.010	ENSPPRG00000011222	SMG7	100	97.010	Panthera_pardus
ENSTSYG00000002667	SMG7	100	96.856	ENSPTIG00000007242	SMG7	100	96.856	Panthera_tigris_altaica
ENSTSYG00000002667	SMG7	100	97.625	ENSPTRG00000001764	SMG7	100	97.625	Pan_troglodytes
ENSTSYG00000002667	SMG7	100	97.449	ENSPANG00000004520	SMG7	100	97.449	Papio_anubis
ENSTSYG00000002667	SMG7	80	92.258	ENSPKIG00000007242	smg7	99	68.812	Paramormyrops_kingsleyae
ENSTSYG00000002667	SMG7	97	91.205	ENSPSIG00000012201	SMG7	99	91.117	Pelodiscus_sinensis
ENSTSYG00000002667	SMG7	81	86.076	ENSPMGG00000002179	-	93	81.657	Periophthalmus_magnuspinnatus
ENSTSYG00000002667	SMG7	59	57.000	ENSPMGG00000021833	smg7	81	70.796	Periophthalmus_magnuspinnatus
ENSTSYG00000002667	SMG7	98	94.691	ENSPEMG00000011315	Smg7	100	94.691	Peromyscus_maniculatus_bairdii
ENSTSYG00000002667	SMG7	100	92.970	ENSPCIG00000003786	SMG7	100	92.970	Phascolarctos_cinereus
ENSTSYG00000002667	SMG7	80	91.613	ENSPFOG00000019219	smg7	99	62.862	Poecilia_formosa
ENSTSYG00000002667	SMG7	80	91.613	ENSPLAG00000001446	smg7	99	64.397	Poecilia_latipinna
ENSTSYG00000002667	SMG7	80	91.613	ENSPMEG00000005218	smg7	99	63.669	Poecilia_mexicana
ENSTSYG00000002667	SMG7	81	89.809	ENSPREG00000019039	smg7	91	61.561	Poecilia_reticulata
ENSTSYG00000002667	SMG7	100	97.713	ENSPPYG00000000427	SMG7	100	97.713	Pongo_abelii
ENSTSYG00000002667	SMG7	98	83.377	ENSPCAG00000008360	SMG7	100	83.377	Procavia_capensis
ENSTSYG00000002667	SMG7	100	97.778	ENSPCOG00000011996	SMG7	100	97.778	Propithecus_coquereli
ENSTSYG00000002667	SMG7	99	85.030	ENSPVAG00000000851	SMG7	99	85.030	Pteropus_vampyrus
ENSTSYG00000002667	SMG7	81	94.268	ENSPNYG00000007643	smg7	99	66.094	Pundamilia_nyererei
ENSTSYG00000002667	SMG7	89	87.791	ENSPNAG00000011374	smg7	98	71.212	Pygocentrus_nattereri
ENSTSYG00000002667	SMG7	100	94.415	ENSRNOG00000027962	Smg7	100	95.370	Rattus_norvegicus
ENSTSYG00000002667	SMG7	100	97.361	ENSRBIG00000036316	SMG7	100	97.361	Rhinopithecus_bieti
ENSTSYG00000002667	SMG7	100	97.361	ENSRROG00000035719	SMG7	100	97.361	Rhinopithecus_roxellana
ENSTSYG00000002667	SMG7	100	97.031	ENSSBOG00000023454	SMG7	100	97.031	Saimiri_boliviensis_boliviensis
ENSTSYG00000002667	SMG7	100	92.625	ENSSHAG00000013147	SMG7	100	92.625	Sarcophilus_harrisii
ENSTSYG00000002667	SMG7	80	92.903	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSTSYG00000002667	SMG7	80	94.194	ENSSMAG00000006067	smg7	99	65.633	Scophthalmus_maximus
ENSTSYG00000002667	SMG7	81	94.268	ENSSDUG00000017543	smg7	99	65.765	Seriola_dumerili
ENSTSYG00000002667	SMG7	81	93.038	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSTSYG00000002667	SMG7	99	90.018	ENSSPUG00000002064	SMG7	99	90.018	Sphenodon_punctatus
ENSTSYG00000002667	SMG7	73	94.326	ENSSPAG00000008733	smg7	100	65.891	Stegastes_partitus
ENSTSYG00000002667	SMG7	100	96.581	ENSSSCG00000015558	SMG7	100	96.581	Sus_scrofa
ENSTSYG00000002667	SMG7	99	88.899	ENSTGUG00000003928	SMG7	100	88.899	Taeniopygia_guttata
ENSTSYG00000002667	SMG7	90	82.857	ENSTRUG00000003612	-	95	82.857	Takifugu_rubripes
ENSTSYG00000002667	SMG7	80	89.103	ENSTNIG00000002802	smg7	99	63.782	Tetraodon_nigroviridis
ENSTSYG00000002667	SMG7	78	95.339	ENSTBEG00000003220	SMG7	81	93.133	Tupaia_belangeri
ENSTSYG00000002667	SMG7	99	93.766	ENSTTRG00000014778	SMG7	100	94.108	Tursiops_truncatus
ENSTSYG00000002667	SMG7	96	92.694	ENSUAMG00000017473	SMG7	100	92.694	Ursus_americanus
ENSTSYG00000002667	SMG7	100	92.751	ENSUMAG00000016389	SMG7	100	96.633	Ursus_maritimus
ENSTSYG00000002667	SMG7	100	96.667	ENSVVUG00000008976	SMG7	100	96.667	Vulpes_vulpes
ENSTSYG00000002667	SMG7	80	92.258	ENSXETG00000012528	smg7	100	70.859	Xenopus_tropicalis
ENSTSYG00000002667	SMG7	80	92.258	ENSXMAG00000007123	smg7	99	64.605	Xiphophorus_maculatus