EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000002680 (Gene tree)
Gene ID: 103273999
Gene Symbol: -
Alias: -
Full Name: family with sequence similarity 177 member A1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 98352 bases
Position: chrKE948816.1:376155-474506
Accession: 103273999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000002468	SRP54	PF00448.22	7.1e-78	1	1
ENSTSYP00000033545	SRP54	PF00448.22	8.8e-78	1	1
ENSTSYP00000023720	SRP54	PF00448.22	9.7e-78	1	1
ENSTSYP00000023720	SRP54_N	PF02881.19	1.9e-20	1	1
ENSTSYP00000033545	SRP54_N	PF02881.19	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000002681	-	1368	-	ENSTSYP00000002468	455 (aa)	XP_021574915	UPI000B533AAA
ENSTSYT00000030112	-	2536	XM_008071458	ENSTSYP00000023756	235 (aa)	XP_008069649	UPI000C2F4BC5
ENSTSYT00000031963	-	2257	XM_008071457	ENSTSYP00000023720	504 (aa)	XP_008069648	A0A1U7ULS1
ENSTSYT00000045394	-	1551	-	ENSTSYP00000033545	516 (aa)	-	UPI000C2F5EA9

Gene Model

Click here to download ENSTSYG00000002680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000002680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000002680	-	94	88.842	ENSTSYG00000035333	-	97	86.263

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000002680	-	100	99.802	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSTSYG00000002680	-	100	95.635	ENSAPOG00000011314	srp54	100	95.635	Acanthochromis_polyacanthus
ENSTSYG00000002680	-	100	99.802	ENSAMEG00000015544	SRP54	100	99.802	Ailuropoda_melanoleuca
ENSTSYG00000002680	-	89	94.432	ENSACIG00000022831	srp54	97	94.432	Amphilophus_citrinellus
ENSTSYG00000002680	-	100	95.635	ENSAOCG00000019401	srp54	100	95.635	Amphiprion_ocellaris
ENSTSYG00000002680	-	100	95.635	ENSAPEG00000001977	srp54	100	95.635	Amphiprion_percula
ENSTSYG00000002680	-	100	96.032	ENSATEG00000013877	srp54	100	96.032	Anabas_testudineus
ENSTSYG00000002680	-	97	98.800	ENSAPLG00000010125	SRP54	100	98.800	Anas_platyrhynchos
ENSTSYG00000002680	-	72	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSTSYG00000002680	-	100	98.413	ENSACAG00000002103	-	100	98.413	Anolis_carolinensis
ENSTSYG00000002680	-	95	95.392	ENSACAG00000010631	-	100	95.392	Anolis_carolinensis
ENSTSYG00000002680	-	100	99.802	ENSANAG00000022133	SRP54	100	99.802	Aotus_nancymaae
ENSTSYG00000002680	-	100	95.833	ENSACLG00000015866	srp54	100	95.833	Astatotilapia_calliptera
ENSTSYG00000002680	-	100	95.437	ENSAMXG00000032669	SRP54	100	95.437	Astyanax_mexicanus
ENSTSYG00000002680	-	100	99.802	ENSBTAG00000019085	SRP54	100	99.802	Bos_taurus
ENSTSYG00000002680	-	98	71.486	WBGene00009012	F21D5.7	100	71.486	Caenorhabditis_elegans
ENSTSYG00000002680	-	100	99.802	ENSCJAG00000006581	SRP54	100	99.802	Callithrix_jacchus
ENSTSYG00000002680	-	100	99.802	ENSCAFG00000013331	SRP54	100	99.802	Canis_familiaris
ENSTSYG00000002680	-	100	99.802	ENSCAFG00020023427	SRP54	100	99.802	Canis_lupus_dingo
ENSTSYG00000002680	-	100	99.802	ENSCHIG00000026345	SRP54	100	99.802	Capra_hircus
ENSTSYG00000002680	-	94	64.286	ENSCAPG00000008780	SRP54	100	64.286	Cavia_aperea
ENSTSYG00000002680	-	100	99.405	ENSCPOG00000003691	SRP54	100	99.405	Cavia_porcellus
ENSTSYG00000002680	-	92	99.761	ENSCCAG00000024179	SRP54	100	99.761	Cebus_capucinus
ENSTSYG00000002680	-	100	99.802	ENSCATG00000034083	SRP54	100	99.802	Cercocebus_atys
ENSTSYG00000002680	-	100	99.802	ENSCLAG00000015076	SRP54	100	99.802	Chinchilla_lanigera
ENSTSYG00000002680	-	100	99.802	ENSCSAG00000015575	SRP54	100	99.802	Chlorocebus_sabaeus
ENSTSYG00000002680	-	95	87.734	ENSCHOG00000008986	SRP54	100	87.734	Choloepus_hoffmanni
ENSTSYG00000002680	-	100	99.008	ENSCPBG00000026195	SRP54	100	99.008	Chrysemys_picta_bellii
ENSTSYG00000002680	-	100	81.548	ENSCING00000007380	-	100	81.548	Ciona_intestinalis
ENSTSYG00000002680	-	100	99.802	ENSCANG00000028532	SRP54	100	99.802	Colobus_angolensis_palliatus
ENSTSYG00000002680	-	100	99.405	ENSCGRG00001009525	-	100	99.405	Cricetulus_griseus_chok1gshd
ENSTSYG00000002680	-	76	99.221	ENSCGRG00000009453	-	89	99.221	Cricetulus_griseus_crigri
ENSTSYG00000002680	-	100	94.841	ENSCSEG00000012392	srp54	100	94.841	Cynoglossus_semilaevis
ENSTSYG00000002680	-	100	95.635	ENSCVAG00000010395	srp54	100	95.635	Cyprinodon_variegatus
ENSTSYG00000002680	-	100	95.833	ENSDARG00000098367	srp54	100	95.833	Danio_rerio
ENSTSYG00000002680	-	100	99.802	ENSDNOG00000032525	SRP54	100	99.802	Dasypus_novemcinctus
ENSTSYG00000002680	-	89	85.268	ENSDORG00000005159	-	97	85.268	Dipodomys_ordii
ENSTSYG00000002680	-	96	77.526	FBgn0010747	Srp54k	98	77.108	Drosophila_melanogaster
ENSTSYG00000002680	-	92	58.134	ENSETEG00000012102	-	99	58.134	Echinops_telfairi
ENSTSYG00000002680	-	100	98.611	ENSETEG00000016307	-	100	98.611	Echinops_telfairi
ENSTSYG00000002680	-	100	87.302	ENSEBUG00000009437	-	100	87.302	Eptatretus_burgeri
ENSTSYG00000002680	-	100	99.802	ENSEASG00005002057	SRP54	100	99.802	Equus_asinus_asinus
ENSTSYG00000002680	-	99	99.598	ENSECAG00000018042	SRP54	98	99.598	Equus_caballus
ENSTSYG00000002680	-	98	88.367	ENSEEUG00000001511	SRP54	100	83.532	Erinaceus_europaeus
ENSTSYG00000002680	-	100	95.040	ENSELUG00000003395	srp54	100	95.040	Esox_lucius
ENSTSYG00000002680	-	100	99.603	ENSFCAG00000032033	SRP54	100	99.603	Felis_catus
ENSTSYG00000002680	-	100	99.008	ENSFALG00000005995	SRP54	100	99.008	Ficedula_albicollis
ENSTSYG00000002680	-	100	99.802	ENSFDAG00000016767	SRP54	100	99.802	Fukomys_damarensis
ENSTSYG00000002680	-	100	95.238	ENSFHEG00000004263	srp54	100	95.238	Fundulus_heteroclitus
ENSTSYG00000002680	-	98	89.286	ENSGMOG00000011391	srp54	100	89.958	Gadus_morhua
ENSTSYG00000002680	-	100	99.008	ENSGALG00000023135	SRP54	100	99.008	Gallus_gallus
ENSTSYG00000002680	-	100	95.833	ENSGAFG00000011586	srp54	100	95.833	Gambusia_affinis
ENSTSYG00000002680	-	100	95.238	ENSGACG00000004181	srp54	100	95.238	Gasterosteus_aculeatus
ENSTSYG00000002680	-	100	99.008	ENSGAGG00000014766	SRP54	100	99.008	Gopherus_agassizii
ENSTSYG00000002680	-	100	99.802	ENSGGOG00000002926	SRP54	100	99.802	Gorilla_gorilla
ENSTSYG00000002680	-	100	95.833	ENSHBUG00000005678	srp54	100	95.833	Haplochromis_burtoni
ENSTSYG00000002680	-	100	99.802	ENSHGLG00000002850	SRP54	100	99.802	Heterocephalus_glaber_female
ENSTSYG00000002680	-	100	68.911	ENSHGLG00100007281	-	100	68.911	Heterocephalus_glaber_male
ENSTSYG00000002680	-	100	99.802	ENSHGLG00100005263	SRP54	100	99.802	Heterocephalus_glaber_male
ENSTSYG00000002680	-	100	93.849	ENSHCOG00000021127	srp54	100	93.849	Hippocampus_comes
ENSTSYG00000002680	-	100	95.040	ENSIPUG00000001420	srp54	100	95.040	Ictalurus_punctatus
ENSTSYG00000002680	-	100	99.802	ENSSTOG00000016023	SRP54	100	99.802	Ictidomys_tridecemlineatus
ENSTSYG00000002680	-	100	94.643	ENSJJAG00000013417	-	100	94.643	Jaculus_jaculus
ENSTSYG00000002680	-	97	76.591	ENSJJAG00000016404	-	100	76.591	Jaculus_jaculus
ENSTSYG00000002680	-	100	95.238	ENSKMAG00000007707	srp54	100	95.238	Kryptolebias_marmoratus
ENSTSYG00000002680	-	100	95.635	ENSLBEG00000021122	srp54	100	95.635	Labrus_bergylta
ENSTSYG00000002680	-	100	95.635	ENSLBEG00000018690	srp54	100	95.635	Labrus_bergylta
ENSTSYG00000002680	-	100	96.230	ENSLACG00000017890	SRP54	100	96.230	Latimeria_chalumnae
ENSTSYG00000002680	-	100	96.627	ENSLOCG00000009440	srp54	100	96.627	Lepisosteus_oculatus
ENSTSYG00000002680	-	100	99.802	ENSLAFG00000012007	SRP54	100	99.802	Loxodonta_africana
ENSTSYG00000002680	-	100	99.802	ENSMFAG00000044371	SRP54	100	99.802	Macaca_fascicularis
ENSTSYG00000002680	-	100	99.802	ENSMMUG00000015073	FAM177A1	100	99.802	Macaca_mulatta
ENSTSYG00000002680	-	100	99.802	ENSMNEG00000006947	SRP54	100	99.802	Macaca_nemestrina
ENSTSYG00000002680	-	100	99.802	ENSMLEG00000042251	SRP54	100	99.802	Mandrillus_leucophaeus
ENSTSYG00000002680	-	100	95.833	ENSMAMG00000004803	srp54	100	95.833	Mastacembelus_armatus
ENSTSYG00000002680	-	100	95.833	ENSMZEG00005027528	srp54	100	95.833	Maylandia_zebra
ENSTSYG00000002680	-	100	94.269	ENSMGAG00000012481	SRP54	100	94.269	Meleagris_gallopavo
ENSTSYG00000002680	-	100	99.603	ENSMAUG00000014447	-	100	99.603	Mesocricetus_auratus
ENSTSYG00000002680	-	100	99.802	ENSMICG00000010270	SRP54	100	99.802	Microcebus_murinus
ENSTSYG00000002680	-	97	99.545	ENSMOCG00000000948	-	100	99.545	Microtus_ochrogaster
ENSTSYG00000002680	-	89	93.960	ENSMMOG00000020303	srp54	98	93.960	Mola_mola
ENSTSYG00000002680	-	100	99.603	ENSMODG00000012925	-	100	99.603	Monodelphis_domestica
ENSTSYG00000002680	-	100	99.603	ENSMODG00000023150	-	100	99.603	Monodelphis_domestica
ENSTSYG00000002680	-	88	95.260	ENSMALG00000009163	srp54	98	95.260	Monopterus_albus
ENSTSYG00000002680	-	100	99.603	MGP_CAROLIEiJ_G0017754	-	100	99.603	Mus_caroli
ENSTSYG00000002680	-	100	98.810	ENSMUSG00000079108	Srp54c	100	98.810	Mus_musculus
ENSTSYG00000002680	-	100	99.603	ENSMUSG00000112449	Srp54b	100	99.603	Mus_musculus
ENSTSYG00000002680	-	100	99.603	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSTSYG00000002680	-	100	99.603	MGP_PahariEiJ_G0029510	-	100	99.603	Mus_pahari
ENSTSYG00000002680	-	100	99.802	ENSMPUG00000016302	SRP54	100	99.802	Mustela_putorius_furo
ENSTSYG00000002680	-	100	99.206	ENSMLUG00000008958	SRP54	100	99.206	Myotis_lucifugus
ENSTSYG00000002680	-	100	89.683	ENSNGAG00000019806	-	100	89.683	Nannospalax_galili
ENSTSYG00000002680	-	97	95.455	ENSNBRG00000006000	srp54	100	95.455	Neolamprologus_brichardi
ENSTSYG00000002680	-	100	99.802	ENSNLEG00000003496	SRP54	100	99.802	Nomascus_leucogenys
ENSTSYG00000002680	-	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSTSYG00000002680	-	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSTSYG00000002680	-	100	99.802	ENSODEG00000004865	SRP54	100	99.802	Octodon_degus
ENSTSYG00000002680	-	100	95.833	ENSONIG00000011768	srp54	100	95.833	Oreochromis_niloticus
ENSTSYG00000002680	-	100	99.802	ENSOANG00000014051	SRP54	100	99.802	Ornithorhynchus_anatinus
ENSTSYG00000002680	-	100	99.206	ENSOCUG00000007838	SRP54	100	99.206	Oryctolagus_cuniculus
ENSTSYG00000002680	-	100	95.635	ENSORLG00000010027	srp54	100	95.635	Oryzias_latipes
ENSTSYG00000002680	-	100	95.635	ENSORLG00020001878	srp54	100	95.635	Oryzias_latipes_hni
ENSTSYG00000002680	-	100	95.635	ENSORLG00015021866	srp54	100	95.635	Oryzias_latipes_hsok
ENSTSYG00000002680	-	100	95.437	ENSOMEG00000020952	srp54	100	95.437	Oryzias_melastigma
ENSTSYG00000002680	-	100	99.802	ENSOGAG00000012188	SRP54	100	99.802	Otolemur_garnettii
ENSTSYG00000002680	-	100	99.802	ENSOARG00000007160	SRP54	100	99.802	Ovis_aries
ENSTSYG00000002680	-	100	99.802	ENSPPAG00000017434	SRP54	100	99.802	Pan_paniscus
ENSTSYG00000002680	-	100	98.611	ENSPPRG00000014047	SRP54	100	98.611	Panthera_pardus
ENSTSYG00000002680	-	100	99.603	ENSPTIG00000000744	SRP54	96	99.603	Panthera_tigris_altaica
ENSTSYG00000002680	-	100	99.802	ENSPTRG00000006259	FAM177A1	100	99.802	Pan_troglodytes
ENSTSYG00000002680	-	100	99.802	ENSPANG00000023853	SRP54	100	99.802	Papio_anubis
ENSTSYG00000002680	-	100	95.437	ENSPKIG00000001953	srp54	100	95.437	Paramormyrops_kingsleyae
ENSTSYG00000002680	-	100	98.810	ENSPSIG00000006476	SRP54	100	98.810	Pelodiscus_sinensis
ENSTSYG00000002680	-	91	92.826	ENSPMGG00000004127	srp54	99	92.826	Periophthalmus_magnuspinnatus
ENSTSYG00000002680	-	100	86.706	ENSPEMG00000019634	-	100	86.706	Peromyscus_maniculatus_bairdii
ENSTSYG00000002680	-	100	88.492	ENSPMAG00000006078	-	100	88.492	Petromyzon_marinus
ENSTSYG00000002680	-	100	99.603	ENSPCIG00000016175	SRP54	100	99.603	Phascolarctos_cinereus
ENSTSYG00000002680	-	100	95.833	ENSPFOG00000008870	srp54	100	95.833	Poecilia_formosa
ENSTSYG00000002680	-	100	95.833	ENSPLAG00000009889	srp54	100	95.833	Poecilia_latipinna
ENSTSYG00000002680	-	100	95.833	ENSPMEG00000008601	srp54	100	95.833	Poecilia_mexicana
ENSTSYG00000002680	-	100	95.833	ENSPREG00000004505	srp54	100	95.833	Poecilia_reticulata
ENSTSYG00000002680	-	100	94.643	ENSPPYG00000005739	SRP54	100	94.643	Pongo_abelii
ENSTSYG00000002680	-	100	95.635	ENSPCAG00000006268	SRP54	100	95.635	Procavia_capensis
ENSTSYG00000002680	-	100	97.822	ENSPCOG00000022473	SRP54	100	97.822	Propithecus_coquereli
ENSTSYG00000002680	-	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSTSYG00000002680	-	100	95.833	ENSPNYG00000009717	srp54	100	95.833	Pundamilia_nyererei
ENSTSYG00000002680	-	100	95.635	ENSPNAG00000008544	srp54	100	95.635	Pygocentrus_nattereri
ENSTSYG00000002680	-	100	99.802	ENSRNOG00000032776	Srp54a	100	99.802	Rattus_norvegicus
ENSTSYG00000002680	-	100	99.802	ENSRROG00000041292	SRP54	100	99.802	Rhinopithecus_roxellana
ENSTSYG00000002680	-	86	52.834	YPR088C	SRP54	95	48.084	Saccharomyces_cerevisiae
ENSTSYG00000002680	-	98	99.554	ENSSBOG00000035145	SRP54	100	99.789	Saimiri_boliviensis_boliviensis
ENSTSYG00000002680	-	75	100.000	ENSSHAG00000000671	SRP54	100	100.000	Sarcophilus_harrisii
ENSTSYG00000002680	-	100	96.032	ENSSFOG00015013920	srp54	100	96.032	Scleropages_formosus
ENSTSYG00000002680	-	100	89.700	ENSSMAG00000002441	srp54	100	89.700	Scophthalmus_maximus
ENSTSYG00000002680	-	100	95.437	ENSSDUG00000018586	srp54	100	95.437	Seriola_dumerili
ENSTSYG00000002680	-	100	95.238	ENSSLDG00000010476	srp54	100	95.238	Seriola_lalandi_dorsalis
ENSTSYG00000002680	-	100	99.802	ENSSARG00000002744	SRP54	100	99.802	Sorex_araneus
ENSTSYG00000002680	-	100	99.008	ENSSPUG00000013101	SRP54	100	99.008	Sphenodon_punctatus
ENSTSYG00000002680	-	100	95.635	ENSSPAG00000002354	srp54	100	95.635	Stegastes_partitus
ENSTSYG00000002680	-	100	99.802	ENSSSCG00000001955	SRP54	100	99.802	Sus_scrofa
ENSTSYG00000002680	-	97	98.800	ENSTGUG00000011945	-	100	98.800	Taeniopygia_guttata
ENSTSYG00000002680	-	100	94.841	ENSTRUG00000007057	srp54	100	94.841	Takifugu_rubripes
ENSTSYG00000002680	-	100	94.444	ENSTNIG00000002589	srp54	100	94.444	Tetraodon_nigroviridis
ENSTSYG00000002680	-	98	91.275	ENSTBEG00000011409	SRP54	100	91.275	Tupaia_belangeri
ENSTSYG00000002680	-	100	89.683	ENSTTRG00000000928	SRP54	100	89.683	Tursiops_truncatus
ENSTSYG00000002680	-	52	99.618	ENSUAMG00000012385	SRP54	100	99.618	Ursus_americanus
ENSTSYG00000002680	-	100	99.802	ENSUMAG00000011234	SRP54	100	99.802	Ursus_maritimus
ENSTSYG00000002680	-	94	99.578	ENSVPAG00000005668	SRP54	100	99.578	Vicugna_pacos
ENSTSYG00000002680	-	100	99.802	ENSVVUG00000019962	SRP54	100	99.802	Vulpes_vulpes
ENSTSYG00000002680	-	100	82.051	ENSXETG00000012290	srp54	100	82.051	Xenopus_tropicalis
ENSTSYG00000002680	-	88	95.711	ENSXCOG00000004658	srp54	96	95.711	Xiphophorus_couchianus
ENSTSYG00000002680	-	100	95.833	ENSXMAG00000018315	srp54	100	95.833	Xiphophorus_maculatus