EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000002705 (Gene tree)
Gene ID: 103269737
Gene Symbol: XRN1
Alias: -
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 143322 bases
Position: chrKE944575.1:347687-491008
Accession: 103269737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000002500	XRN_N	PF03159.18	3.9e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000002714	XRN1-201	5476	XM_008067302	ENSTSYP00000002500	1695 (aa)	XP_008065493	A0A1U7U9S6

Gene Model

Click here to download ENSTSYG00000002705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000002705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000002705	XRN1	100	93.864	ENSG00000114127	XRN1	100	99.394	Homo_sapiens
ENSTSYG00000002705	XRN1	95	72.624	ENSAPOG00000000622	xrn1	99	72.616	Acanthochromis_polyacanthus
ENSTSYG00000002705	XRN1	100	91.532	ENSAMEG00000012538	XRN1	100	91.532	Ailuropoda_melanoleuca
ENSTSYG00000002705	XRN1	95	72.498	ENSACIG00000001057	xrn1	99	72.661	Amphilophus_citrinellus
ENSTSYG00000002705	XRN1	100	61.438	ENSAOCG00000014097	xrn1	95	67.126	Amphiprion_ocellaris
ENSTSYG00000002705	XRN1	100	61.039	ENSAPEG00000006620	xrn1	91	72.071	Amphiprion_percula
ENSTSYG00000002705	XRN1	94	70.963	ENSATEG00000009752	xrn1	99	70.691	Anabas_testudineus
ENSTSYG00000002705	XRN1	99	76.307	ENSAPLG00000004905	XRN1	100	76.249	Anas_platyrhynchos
ENSTSYG00000002705	XRN1	100	72.819	ENSACAG00000004985	XRN1	100	72.538	Anolis_carolinensis
ENSTSYG00000002705	XRN1	100	93.569	ENSANAG00000029013	XRN1	99	95.763	Aotus_nancymaae
ENSTSYG00000002705	XRN1	100	60.743	ENSACLG00000004806	xrn1	99	60.822	Astatotilapia_calliptera
ENSTSYG00000002705	XRN1	99	60.797	ENSAMXG00000019370	xrn1	95	94.175	Astyanax_mexicanus
ENSTSYG00000002705	XRN1	100	91.686	ENSBTAG00000011524	XRN1	100	91.686	Bos_taurus
ENSTSYG00000002705	XRN1	71	39.011	WBGene00012730	xrn-1	78	39.720	Caenorhabditis_elegans
ENSTSYG00000002705	XRN1	100	93.392	ENSCJAG00000001872	XRN1	100	93.392	Callithrix_jacchus
ENSTSYG00000002705	XRN1	100	92.213	ENSCAFG00000007783	XRN1	100	92.096	Canis_familiaris
ENSTSYG00000002705	XRN1	100	91.917	ENSCAFG00020009120	XRN1	99	94.000	Canis_lupus_dingo
ENSTSYG00000002705	XRN1	99	90.462	ENSCHIG00000019192	XRN1	99	90.462	Capra_hircus
ENSTSYG00000002705	XRN1	55	76.285	ENSCAPG00000004604	-	99	76.285	Cavia_aperea
ENSTSYG00000002705	XRN1	100	93.982	ENSCCAG00000034800	XRN1	99	97.306	Cebus_capucinus
ENSTSYG00000002705	XRN1	100	94.336	ENSCATG00000041794	XRN1	100	94.336	Cercocebus_atys
ENSTSYG00000002705	XRN1	100	88.113	ENSCLAG00000001451	XRN1	99	95.563	Chinchilla_lanigera
ENSTSYG00000002705	XRN1	100	93.677	ENSCSAG00000011265	XRN1	100	93.677	Chlorocebus_sabaeus
ENSTSYG00000002705	XRN1	58	98.701	ENSCHOG00000013961	-	59	98.701	Choloepus_hoffmanni
ENSTSYG00000002705	XRN1	70	45.305	ENSCSAVG00000008584	-	98	44.836	Ciona_savignyi
ENSTSYG00000002705	XRN1	100	94.572	ENSCANG00000037495	XRN1	99	97.306	Colobus_angolensis_palliatus
ENSTSYG00000002705	XRN1	100	88.279	ENSCGRG00001019411	Xrn1	99	95.880	Cricetulus_griseus_chok1gshd
ENSTSYG00000002705	XRN1	100	88.279	ENSCGRG00000012464	Xrn1	99	95.880	Cricetulus_griseus_crigri
ENSTSYG00000002705	XRN1	100	56.070	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSTSYG00000002705	XRN1	67	67.750	ENSCVAG00000013089	xrn1	99	72.222	Cyprinodon_variegatus
ENSTSYG00000002705	XRN1	99	62.980	ENSDARG00000091652	xrn1	98	79.114	Danio_rerio
ENSTSYG00000002705	XRN1	100	87.500	ENSDORG00000013833	Xrn1	100	87.500	Dipodomys_ordii
ENSTSYG00000002705	XRN1	75	39.627	FBgn0020261	pcm	72	40.965	Drosophila_melanogaster
ENSTSYG00000002705	XRN1	86	100.000	ENSETEG00000003978	XRN1	88	99.194	Echinops_telfairi
ENSTSYG00000002705	XRN1	100	92.037	ENSEASG00005002687	XRN1	100	95.429	Equus_asinus_asinus
ENSTSYG00000002705	XRN1	100	92.037	ENSECAG00000008301	XRN1	100	92.037	Equus_caballus
ENSTSYG00000002705	XRN1	92	82.991	ENSEEUG00000011323	XRN1	92	82.991	Erinaceus_europaeus
ENSTSYG00000002705	XRN1	100	61.538	ENSELUG00000000169	xrn1	100	61.105	Esox_lucius
ENSTSYG00000002705	XRN1	100	89.151	ENSFCAG00000027589	XRN1	99	95.604	Felis_catus
ENSTSYG00000002705	XRN1	100	74.804	ENSFALG00000007021	XRN1	100	74.467	Ficedula_albicollis
ENSTSYG00000002705	XRN1	100	89.036	ENSFDAG00000020494	XRN1	99	95.087	Fukomys_damarensis
ENSTSYG00000002705	XRN1	84	68.033	ENSGMOG00000006396	xrn1	83	67.726	Gadus_morhua
ENSTSYG00000002705	XRN1	100	74.902	ENSGALG00000002706	XRN1	100	74.845	Gallus_gallus
ENSTSYG00000002705	XRN1	100	59.694	ENSGACG00000014328	xrn1	100	60.261	Gasterosteus_aculeatus
ENSTSYG00000002705	XRN1	95	77.878	ENSGAGG00000017535	XRN1	99	77.818	Gopherus_agassizii
ENSTSYG00000002705	XRN1	100	93.982	ENSGGOG00000008047	XRN1	100	93.982	Gorilla_gorilla
ENSTSYG00000002705	XRN1	100	61.047	ENSHBUG00000005908	xrn1	98	72.690	Haplochromis_burtoni
ENSTSYG00000002705	XRN1	100	89.908	ENSHGLG00000014476	XRN1	99	96.038	Heterocephalus_glaber_female
ENSTSYG00000002705	XRN1	100	89.908	ENSHGLG00100015130	XRN1	99	96.038	Heterocephalus_glaber_male
ENSTSYG00000002705	XRN1	96	70.451	ENSHCOG00000014062	xrn1	99	70.129	Hippocampus_comes
ENSTSYG00000002705	XRN1	99	61.927	ENSIPUG00000015229	xrn1	99	62.063	Ictalurus_punctatus
ENSTSYG00000002705	XRN1	100	91.859	ENSSTOG00000013552	XRN1	99	97.147	Ictidomys_tridecemlineatus
ENSTSYG00000002705	XRN1	98	86.827	ENSJJAG00000010863	Xrn1	99	94.311	Jaculus_jaculus
ENSTSYG00000002705	XRN1	94	62.384	ENSKMAG00000021356	xrn1	94	76.371	Kryptolebias_marmoratus
ENSTSYG00000002705	XRN1	100	60.193	ENSLBEG00000018656	xrn1	97	96.117	Labrus_bergylta
ENSTSYG00000002705	XRN1	100	69.270	ENSLACG00000009020	XRN1	100	69.099	Latimeria_chalumnae
ENSTSYG00000002705	XRN1	100	65.040	ENSLOCG00000007944	xrn1	100	64.925	Lepisosteus_oculatus
ENSTSYG00000002705	XRN1	63	95.790	ENSLAFG00000015426	XRN1	100	95.790	Loxodonta_africana
ENSTSYG00000002705	XRN1	100	94.454	ENSMFAG00000032599	XRN1	100	94.454	Macaca_fascicularis
ENSTSYG00000002705	XRN1	100	94.395	ENSMMUG00000014038	XRN1	100	94.395	Macaca_mulatta
ENSTSYG00000002705	XRN1	100	94.218	ENSMNEG00000034217	XRN1	100	94.218	Macaca_nemestrina
ENSTSYG00000002705	XRN1	94	71.271	ENSMAMG00000013219	xrn1	94	76.082	Mastacembelus_armatus
ENSTSYG00000002705	XRN1	100	60.629	ENSMZEG00005015099	xrn1	99	60.708	Maylandia_zebra
ENSTSYG00000002705	XRN1	99	74.942	ENSMGAG00000006333	XRN1	100	74.884	Meleagris_gallopavo
ENSTSYG00000002705	XRN1	100	93.875	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSTSYG00000002705	XRN1	58	94.612	ENSMOCG00000008665	Xrn1	99	94.612	Microtus_ochrogaster
ENSTSYG00000002705	XRN1	100	81.272	ENSMODG00000021236	XRN1	100	81.155	Monodelphis_domestica
ENSTSYG00000002705	XRN1	100	57.855	ENSMALG00000004098	xrn1	100	57.708	Monopterus_albus
ENSTSYG00000002705	XRN1	96	94.945	MGP_CAROLIEiJ_G0032535	Xrn1	100	100.000	Mus_caroli
ENSTSYG00000002705	XRN1	100	86.894	ENSMUSG00000032410	Xrn1	100	100.000	Mus_musculus
ENSTSYG00000002705	XRN1	100	86.836	MGP_PahariEiJ_G0015404	Xrn1	100	100.000	Mus_pahari
ENSTSYG00000002705	XRN1	100	86.952	MGP_SPRETEiJ_G0033678	Xrn1	100	100.000	Mus_spretus
ENSTSYG00000002705	XRN1	100	92.623	ENSMPUG00000012040	XRN1	100	92.623	Mustela_putorius_furo
ENSTSYG00000002705	XRN1	100	88.517	ENSMLUG00000016885	XRN1	100	88.517	Myotis_lucifugus
ENSTSYG00000002705	XRN1	58	90.967	ENSNGAG00000023964	Xrn1	99	90.967	Nannospalax_galili
ENSTSYG00000002705	XRN1	100	94.454	ENSNLEG00000004726	XRN1	100	94.454	Nomascus_leucogenys
ENSTSYG00000002705	XRN1	76	98.969	ENSMEUG00000014473	-	77	99.029	Notamacropus_eugenii
ENSTSYG00000002705	XRN1	79	83.680	ENSOPRG00000007337	-	78	83.680	Ochotona_princeps
ENSTSYG00000002705	XRN1	100	61.666	ENSONIG00000016673	xrn1	99	64.732	Oreochromis_niloticus
ENSTSYG00000002705	XRN1	92	76.943	ENSOANG00000006735	XRN1	100	76.816	Ornithorhynchus_anatinus
ENSTSYG00000002705	XRN1	100	89.226	ENSOCUG00000001861	XRN1	100	89.226	Oryctolagus_cuniculus
ENSTSYG00000002705	XRN1	100	61.503	ENSORLG00000013005	xrn1	100	60.967	Oryzias_latipes
ENSTSYG00000002705	XRN1	100	61.446	ENSORLG00020005559	xrn1	100	61.463	Oryzias_latipes_hni
ENSTSYG00000002705	XRN1	100	61.209	ENSORLG00015022523	xrn1	100	60.949	Oryzias_latipes_hsok
ENSTSYG00000002705	XRN1	92	72.638	ENSOMEG00000015397	xrn1	99	72.905	Oryzias_melastigma
ENSTSYG00000002705	XRN1	100	90.164	ENSOGAG00000000170	XRN1	100	90.340	Otolemur_garnettii
ENSTSYG00000002705	XRN1	99	92.321	ENSOARG00000006343	XRN1	99	92.321	Ovis_aries
ENSTSYG00000002705	XRN1	100	93.923	ENSPPAG00000010180	XRN1	100	93.923	Pan_paniscus
ENSTSYG00000002705	XRN1	100	93.337	ENSPPRG00000007125	XRN1	100	93.337	Panthera_pardus
ENSTSYG00000002705	XRN1	100	93.396	ENSPTIG00000021081	XRN1	100	93.396	Panthera_tigris_altaica
ENSTSYG00000002705	XRN1	100	94.041	ENSPTRG00000015482	XRN1	100	94.041	Pan_troglodytes
ENSTSYG00000002705	XRN1	100	94.277	ENSPANG00000010638	XRN1	100	94.277	Papio_anubis
ENSTSYG00000002705	XRN1	100	76.585	ENSPSIG00000018050	XRN1	100	76.756	Pelodiscus_sinensis
ENSTSYG00000002705	XRN1	57	76.923	ENSPMGG00000002648	xrn1	98	77.373	Periophthalmus_magnuspinnatus
ENSTSYG00000002705	XRN1	58	95.563	ENSPEMG00000020610	Xrn1	99	95.563	Peromyscus_maniculatus_bairdii
ENSTSYG00000002705	XRN1	65	50.422	ENSPMAG00000002975	xrn1	91	78.448	Petromyzon_marinus
ENSTSYG00000002705	XRN1	100	81.177	ENSPCIG00000028735	XRN1	99	89.488	Phascolarctos_cinereus
ENSTSYG00000002705	XRN1	91	64.350	ENSPFOG00000013932	xrn1	99	64.186	Poecilia_formosa
ENSTSYG00000002705	XRN1	91	63.567	ENSPLAG00000021653	xrn1	99	64.018	Poecilia_latipinna
ENSTSYG00000002705	XRN1	89	64.151	ENSPMEG00000003076	xrn1	95	64.481	Poecilia_mexicana
ENSTSYG00000002705	XRN1	100	60.546	ENSPREG00000021147	xrn1	100	61.063	Poecilia_reticulata
ENSTSYG00000002705	XRN1	100	93.267	ENSPPYG00000014172	XRN1	100	93.267	Pongo_abelii
ENSTSYG00000002705	XRN1	87	83.795	ENSPCAG00000005638	XRN1	96	83.795	Procavia_capensis
ENSTSYG00000002705	XRN1	100	94.159	ENSPCOG00000013089	XRN1	99	96.734	Propithecus_coquereli
ENSTSYG00000002705	XRN1	94	91.941	ENSPVAG00000016265	XRN1	93	91.941	Pteropus_vampyrus
ENSTSYG00000002705	XRN1	100	60.915	ENSPNYG00000010570	xrn1	99	61.124	Pundamilia_nyererei
ENSTSYG00000002705	XRN1	99	60.599	ENSPNAG00000023531	xrn1	99	60.288	Pygocentrus_nattereri
ENSTSYG00000002705	XRN1	100	87.413	ENSRNOG00000042951	Xrn1	100	87.413	Rattus_norvegicus
ENSTSYG00000002705	XRN1	100	93.569	ENSRBIG00000041227	XRN1	100	93.569	Rhinopithecus_bieti
ENSTSYG00000002705	XRN1	67	54.223	YGL173C	XRN1	73	54.223	Saccharomyces_cerevisiae
ENSTSYG00000002705	XRN1	100	93.392	ENSSBOG00000029561	XRN1	100	93.392	Saimiri_boliviensis_boliviensis
ENSTSYG00000002705	XRN1	99	80.899	ENSSHAG00000016207	XRN1	100	80.721	Sarcophilus_harrisii
ENSTSYG00000002705	XRN1	100	60.967	ENSSFOG00015024211	xrn1	100	61.127	Scleropages_formosus
ENSTSYG00000002705	XRN1	94	72.052	ENSSMAG00000016534	xrn1	98	71.971	Scophthalmus_maximus
ENSTSYG00000002705	XRN1	91	71.928	ENSSDUG00000010306	xrn1	97	71.857	Seriola_dumerili
ENSTSYG00000002705	XRN1	97	70.272	ENSSLDG00000021543	xrn1	100	70.209	Seriola_lalandi_dorsalis
ENSTSYG00000002705	XRN1	68	84.917	ENSSARG00000007741	-	83	84.917	Sorex_araneus
ENSTSYG00000002705	XRN1	100	77.204	ENSTGUG00000008498	XRN1	100	76.972	Taeniopygia_guttata
ENSTSYG00000002705	XRN1	100	58.673	ENSTRUG00000004895	xrn1	96	76.409	Takifugu_rubripes
ENSTSYG00000002705	XRN1	96	68.501	ENSTNIG00000017615	xrn1	100	59.165	Tetraodon_nigroviridis
ENSTSYG00000002705	XRN1	84	97.035	ENSTBEG00000003256	XRN1	84	97.035	Tupaia_belangeri
ENSTSYG00000002705	XRN1	100	88.173	ENSTTRG00000012914	XRN1	100	88.173	Tursiops_truncatus
ENSTSYG00000002705	XRN1	100	91.808	ENSUAMG00000001608	XRN1	99	94.000	Ursus_americanus
ENSTSYG00000002705	XRN1	100	93.681	ENSUMAG00000013625	XRN1	100	93.681	Ursus_maritimus
ENSTSYG00000002705	XRN1	100	89.520	ENSVPAG00000004690	XRN1	100	89.520	Vicugna_pacos
ENSTSYG00000002705	XRN1	100	93.384	ENSVVUG00000024461	XRN1	99	96.830	Vulpes_vulpes
ENSTSYG00000002705	XRN1	100	69.195	ENSXETG00000000619	xrn1	97	88.441	Xenopus_tropicalis
ENSTSYG00000002705	XRN1	100	60.902	ENSXCOG00000007917	xrn1	100	60.671	Xiphophorus_couchianus
ENSTSYG00000002705	XRN1	92	71.720	ENSXMAG00000018320	xrn1	98	71.883	Xiphophorus_maculatus