EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTSYG00000002967 (Gene tree)
Gene ID
103273748
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Carlito_syrichta
Status
putative
Strand
Plus strand
Length
47898 bases
Position
chrKE948655.1:260592-308489
Accession
103273748
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTSYP00000002738CPSF73-100_CPF11718.82.3e-5411
ENSTSYP00000002738Beta-CaspPF10996.85.6e-3411
ENSTSYP00000002738Lactamase_BPF00753.271.2e-1811
ENSTSYP00000002738RMMBLPF07521.121.5e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTSYT00000002989CPSF3-2012382XM_008071185ENSTSYP00000002738684 (aa)XP_008069376A0A1U7UU30
Gene Model
Click here to download ENSTSYG00000002967's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000002967's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTSYG00000002967CPSF36439.955ENSTSYG00000012018INTS118240.444
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTSYG00000002967CPSF310099.708ENSG00000119203CPSF3100100.000Homo_sapiens
ENSTSYG00000002967CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSTSYG00000002967CPSF39985.420ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSTSYG00000002967CPSF310099.415ENSAMEG00000008493CPSF310099.415Ailuropoda_melanoleuca
ENSTSYG00000002967CPSF39282.803ENSACIG00000009846cpsf39982.803Amphilophus_citrinellus
ENSTSYG00000002967CPSF39286.508ENSACIG00000023663CPSF39986.508Amphilophus_citrinellus
ENSTSYG00000002967CPSF39987.941ENSAOCG00000010077CPSF39887.941Amphiprion_ocellaris
ENSTSYG00000002967CPSF39985.420ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSTSYG00000002967CPSF39985.567ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSTSYG00000002967CPSF39987.941ENSAPEG00000021167CPSF39887.941Amphiprion_percula
ENSTSYG00000002967CPSF39983.235ENSATEG00000014525CPSF39883.235Anabas_testudineus
ENSTSYG00000002967CPSF39985.420ENSATEG00000003959cpsf39885.420Anabas_testudineus
ENSTSYG00000002967CPSF39895.238ENSAPLG00000006941CPSF39895.238Anas_platyrhynchos
ENSTSYG00000002967CPSF39393.071ENSACAG00000001759CPSF39993.071Anolis_carolinensis
ENSTSYG00000002967CPSF310093.129ENSANAG00000031254CPSF310093.129Aotus_nancymaae
ENSTSYG00000002967CPSF39785.714ENSACLG00000014484cpsf39985.714Astatotilapia_calliptera
ENSTSYG00000002967CPSF39286.349ENSACLG00000018846CPSF39986.349Astatotilapia_calliptera
ENSTSYG00000002967CPSF39988.235ENSAMXG00000004786cpsf39888.235Astyanax_mexicanus
ENSTSYG00000002967CPSF310099.561ENSBTAG00000019735CPSF310099.561Bos_taurus
ENSTSYG00000002967CPSF39159.213WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSTSYG00000002967CPSF310099.415ENSCJAG00000006276CPSF310099.415Callithrix_jacchus
ENSTSYG00000002967CPSF310099.415ENSCAFG00000003375CPSF39599.415Canis_familiaris
ENSTSYG00000002967CPSF39099.838ENSCAFG00020026799CPSF310099.838Canis_lupus_dingo
ENSTSYG00000002967CPSF310099.561ENSCHIG00000013973CPSF310099.561Capra_hircus
ENSTSYG00000002967CPSF39897.751ENSCAPG00000013851CPSF310097.751Cavia_aperea
ENSTSYG00000002967CPSF310097.807ENSCPOG00000011299CPSF310097.807Cavia_porcellus
ENSTSYG00000002967CPSF310099.561ENSCCAG00000036730CPSF310099.561Cebus_capucinus
ENSTSYG00000002967CPSF310097.080ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSTSYG00000002967CPSF310097.368ENSCLAG00000002727CPSF310097.368Chinchilla_lanigera
ENSTSYG00000002967CPSF310091.959ENSCSAG00000007125CPSF310091.959Chlorocebus_sabaeus
ENSTSYG00000002967CPSF386100.000ENSCHOG00000000180CPSF38572.105Choloepus_hoffmanni
ENSTSYG00000002967CPSF39995.455ENSCPBG00000014074CPSF39995.455Chrysemys_picta_bellii
ENSTSYG00000002967CPSF39968.129ENSCING00000007214-9868.129Ciona_intestinalis
ENSTSYG00000002967CPSF310086.696ENSCANG00000034435CPSF310086.696Colobus_angolensis_palliatus
ENSTSYG00000002967CPSF310098.830ENSCGRG00001013134Cpsf310098.830Cricetulus_griseus_chok1gshd
ENSTSYG00000002967CPSF310098.830ENSCGRG00000018319Cpsf310098.830Cricetulus_griseus_crigri
ENSTSYG00000002967CPSF39986.784ENSCSEG00000002021CPSF39986.553Cynoglossus_semilaevis
ENSTSYG00000002967CPSF39988.235ENSCVAG00000015067CPSF39888.235Cyprinodon_variegatus
ENSTSYG00000002967CPSF39988.971ENSDARG00000027649cpsf39888.971Danio_rerio
ENSTSYG00000002967CPSF310097.664ENSDNOG00000008940CPSF39597.664Dasypus_novemcinctus
ENSTSYG00000002967CPSF39599.078ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSTSYG00000002967CPSF39967.305FBgn0261065Cpsf739867.305Drosophila_melanogaster
ENSTSYG00000002967CPSF39585.561ENSETEG00000003893CPSF310085.561Echinops_telfairi
ENSTSYG00000002967CPSF39978.653ENSEBUG00000009018cpsf39878.797Eptatretus_burgeri
ENSTSYG00000002967CPSF310099.415ENSEASG00005003970CPSF310099.415Equus_asinus_asinus
ENSTSYG00000002967CPSF310099.415ENSECAG00000019911CPSF310099.415Equus_caballus
ENSTSYG00000002967CPSF310083.918ENSEEUG00000015422CPSF310083.918Erinaceus_europaeus
ENSTSYG00000002967CPSF39988.088ENSELUG00000013775cpsf39888.088Esox_lucius
ENSTSYG00000002967CPSF310099.561ENSFCAG00000007852CPSF310099.561Felis_catus
ENSTSYG00000002967CPSF39595.363ENSFALG00000006572CPSF310095.363Ficedula_albicollis
ENSTSYG00000002967CPSF39997.214ENSFDAG00000006317CPSF39997.214Fukomys_damarensis
ENSTSYG00000002967CPSF35968.780ENSFHEG00000012186CPSF39968.780Fundulus_heteroclitus
ENSTSYG00000002967CPSF39985.125ENSFHEG00000014774cpsf39885.125Fundulus_heteroclitus
ENSTSYG00000002967CPSF39986.618ENSGMOG00000003157cpsf39886.618Gadus_morhua
ENSTSYG00000002967CPSF39995.154ENSGALG00000016424CPSF39995.154Gallus_gallus
ENSTSYG00000002967CPSF39988.071ENSGAFG00000008016CPSF39888.071Gambusia_affinis
ENSTSYG00000002967CPSF39282.830ENSGAFG00000019449cpsf39982.830Gambusia_affinis
ENSTSYG00000002967CPSF36893.362ENSGAGG00000025583CPSF39393.362Gopherus_agassizii
ENSTSYG00000002967CPSF310097.425ENSGGOG00000001757CPSF310099.843Gorilla_gorilla
ENSTSYG00000002967CPSF35981.481ENSHBUG00000014332CPSF39981.481Haplochromis_burtoni
ENSTSYG00000002967CPSF39985.609ENSHBUG00000001188cpsf39985.609Haplochromis_burtoni
ENSTSYG00000002967CPSF310096.784ENSHGLG00000000666CPSF39996.784Heterocephalus_glaber_female
ENSTSYG00000002967CPSF310096.784ENSHGLG00100007765CPSF39996.784Heterocephalus_glaber_male
ENSTSYG00000002967CPSF39984.897ENSHCOG00000007251cpsf39984.897Hippocampus_comes
ENSTSYG00000002967CPSF39986.324ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSTSYG00000002967CPSF39987.059ENSIPUG00000023488cpsf39887.059Ictalurus_punctatus
ENSTSYG00000002967CPSF310098.830ENSSTOG00000004476CPSF310098.830Ictidomys_tridecemlineatus
ENSTSYG00000002967CPSF310097.661ENSJJAG00000023415Cpsf310097.661Jaculus_jaculus
ENSTSYG00000002967CPSF39984.706ENSKMAG00000002806cpsf39884.706Kryptolebias_marmoratus
ENSTSYG00000002967CPSF39987.647ENSKMAG00000007317CPSF39887.647Kryptolebias_marmoratus
ENSTSYG00000002967CPSF35579.625ENSLBEG00000015018-9979.625Labrus_bergylta
ENSTSYG00000002967CPSF39589.043ENSLBEG00000013492CPSF39889.043Labrus_bergylta
ENSTSYG00000002967CPSF39979.265ENSLBEG00000020569cpsf39479.265Labrus_bergylta
ENSTSYG00000002967CPSF39983.800ENSLACG00000008308CPSF39883.800Latimeria_chalumnae
ENSTSYG00000002967CPSF39989.280ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSTSYG00000002967CPSF39997.647ENSLAFG00000009467CPSF310097.647Loxodonta_africana
ENSTSYG00000002967CPSF310099.708ENSMFAG00000001339CPSF310099.708Macaca_fascicularis
ENSTSYG00000002967CPSF39599.691ENSMMUG00000018038CPSF310099.691Macaca_mulatta
ENSTSYG00000002967CPSF310086.988ENSMNEG00000039447CPSF310086.988Macaca_nemestrina
ENSTSYG00000002967CPSF310099.854ENSMLEG00000026825CPSF310099.854Mandrillus_leucophaeus
ENSTSYG00000002967CPSF39985.714ENSMAMG00000003076cpsf39885.714Mastacembelus_armatus
ENSTSYG00000002967CPSF39285.285ENSMAMG00000008835CPSF39985.285Mastacembelus_armatus
ENSTSYG00000002967CPSF39988.529ENSMZEG00005006258CPSF39888.529Maylandia_zebra
ENSTSYG00000002967CPSF39985.609ENSMZEG00005014358cpsf39985.609Maylandia_zebra
ENSTSYG00000002967CPSF39895.202ENSMGAG00000013995CPSF310095.202Meleagris_gallopavo
ENSTSYG00000002967CPSF35597.074ENSMAUG00000000166Cpsf310097.074Mesocricetus_auratus
ENSTSYG00000002967CPSF310093.860ENSMICG00000002363CPSF310093.860Microcebus_murinus
ENSTSYG00000002967CPSF310094.152ENSMOCG00000020067Cpsf310094.152Microtus_ochrogaster
ENSTSYG00000002967CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSTSYG00000002967CPSF39482.016ENSMMOG00000018212CPSF39882.016Mola_mola
ENSTSYG00000002967CPSF310095.948ENSMODG00000014703CPSF310095.948Monodelphis_domestica
ENSTSYG00000002967CPSF39986.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSTSYG00000002967CPSF39383.594ENSMALG00000011474CPSF39983.594Monopterus_albus
ENSTSYG00000002967CPSF310098.538MGP_CAROLIEiJ_G0017640Cpsf310098.538Mus_caroli
ENSTSYG00000002967CPSF310098.538ENSMUSG00000054309Cpsf310098.538Mus_musculus
ENSTSYG00000002967CPSF310098.392MGP_PahariEiJ_G0029397Cpsf310098.392Mus_pahari
ENSTSYG00000002967CPSF310098.538MGP_SPRETEiJ_G0018481Cpsf310098.538Mus_spretus
ENSTSYG00000002967CPSF310098.684ENSMPUG00000013213CPSF310098.684Mustela_putorius_furo
ENSTSYG00000002967CPSF310098.394ENSMLUG00000010636CPSF310098.394Myotis_lucifugus
ENSTSYG00000002967CPSF310098.684ENSNGAG00000019836Cpsf310098.684Nannospalax_galili
ENSTSYG00000002967CPSF39286.349ENSNBRG00000010525CPSF39986.349Neolamprologus_brichardi
ENSTSYG00000002967CPSF39985.169ENSNBRG00000004770cpsf39985.169Neolamprologus_brichardi
ENSTSYG00000002967CPSF310099.708ENSNLEG00000013359CPSF310099.708Nomascus_leucogenys
ENSTSYG00000002967CPSF310065.351ENSMEUG00000013117-10065.351Notamacropus_eugenii
ENSTSYG00000002967CPSF310089.620ENSOPRG00000008902CPSF310089.620Ochotona_princeps
ENSTSYG00000002967CPSF310096.930ENSODEG00000003129CPSF310096.930Octodon_degus
ENSTSYG00000002967CPSF39985.756ENSONIG00000018812cpsf39985.756Oreochromis_niloticus
ENSTSYG00000002967CPSF38296.277ENSOANG00000008577CPSF310096.277Ornithorhynchus_anatinus
ENSTSYG00000002967CPSF310098.977ENSOCUG00000003728CPSF310098.977Oryctolagus_cuniculus
ENSTSYG00000002967CPSF39983.554ENSORLG00000018854cpsf39983.554Oryzias_latipes
ENSTSYG00000002967CPSF39983.554ENSORLG00020013331cpsf39983.554Oryzias_latipes_hni
ENSTSYG00000002967CPSF39983.554ENSORLG00015011017cpsf39983.554Oryzias_latipes_hsok
ENSTSYG00000002967CPSF39983.700ENSOMEG00000010647cpsf39483.700Oryzias_melastigma
ENSTSYG00000002967CPSF310089.620ENSOGAG00000001680CPSF310089.620Otolemur_garnettii
ENSTSYG00000002967CPSF310099.561ENSOARG00000015073CPSF310099.561Ovis_aries
ENSTSYG00000002967CPSF310099.854ENSPPAG00000042457CPSF310099.854Pan_paniscus
ENSTSYG00000002967CPSF310099.269ENSPPRG00000016790CPSF310099.269Panthera_pardus
ENSTSYG00000002967CPSF39999.265ENSPTIG00000003920CPSF310099.213Panthera_tigris_altaica
ENSTSYG00000002967CPSF310099.854ENSPTRG00000011638CPSF310099.854Pan_troglodytes
ENSTSYG00000002967CPSF310099.561ENSPANG00000016798CPSF310099.561Papio_anubis
ENSTSYG00000002967CPSF39989.559ENSPKIG00000023646cpsf39989.302Paramormyrops_kingsleyae
ENSTSYG00000002967CPSF39993.704ENSPSIG00000016144CPSF310093.704Pelodiscus_sinensis
ENSTSYG00000002967CPSF38087.500ENSPMGG00000006141-9587.500Periophthalmus_magnuspinnatus
ENSTSYG00000002967CPSF35979.259ENSPMGG00000015311CPSF39979.259Periophthalmus_magnuspinnatus
ENSTSYG00000002967CPSF310098.246ENSPEMG00000017668Cpsf310098.246Peromyscus_maniculatus_bairdii
ENSTSYG00000002967CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSTSYG00000002967CPSF39897.451ENSPCIG00000009823CPSF39897.546Phascolarctos_cinereus
ENSTSYG00000002967CPSF39984.751ENSPFOG00000015922cpsf39984.751Poecilia_formosa
ENSTSYG00000002967CPSF39987.776ENSPFOG00000010418-9887.776Poecilia_formosa
ENSTSYG00000002967CPSF35980.693ENSPLAG00000021300-9980.693Poecilia_latipinna
ENSTSYG00000002967CPSF39984.751ENSPLAG00000000882cpsf39984.751Poecilia_latipinna
ENSTSYG00000002967CPSF39984.897ENSPMEG00000018309cpsf39984.897Poecilia_mexicana
ENSTSYG00000002967CPSF39982.474ENSPREG00000004482CPSF39882.474Poecilia_reticulata
ENSTSYG00000002967CPSF39282.671ENSPREG00000014875cpsf39982.671Poecilia_reticulata
ENSTSYG00000002967CPSF310095.322ENSPPYG00000012666CPSF310095.322Pongo_abelii
ENSTSYG00000002967CPSF39563.748ENSPCAG00000015042CPSF310063.748Procavia_capensis
ENSTSYG00000002967CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSTSYG00000002967CPSF39999.413ENSPVAG00000005324CPSF39999.413Pteropus_vampyrus
ENSTSYG00000002967CPSF39985.609ENSPNYG00000004405cpsf39985.609Pundamilia_nyererei
ENSTSYG00000002967CPSF37991.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSTSYG00000002967CPSF39987.647ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSTSYG00000002967CPSF39998.534ENSRNOG00000052418Cpsf39998.534Rattus_norvegicus
ENSTSYG00000002967CPSF310093.860ENSRBIG00000041615CPSF39995.209Rhinopithecus_bieti
ENSTSYG00000002967CPSF310099.854ENSRROG00000033792CPSF310099.854Rhinopithecus_roxellana
ENSTSYG00000002967CPSF38443.683YLR277CYSH18443.683Saccharomyces_cerevisiae
ENSTSYG00000002967CPSF310093.478ENSSBOG00000027263CPSF310093.478Saimiri_boliviensis_boliviensis
ENSTSYG00000002967CPSF310097.661ENSSHAG00000007024CPSF310097.661Sarcophilus_harrisii
ENSTSYG00000002967CPSF39989.574ENSSFOG00015002108cpsf39989.574Scleropages_formosus
ENSTSYG00000002967CPSF39587.654ENSSMAG00000020534CPSF39587.654Scophthalmus_maximus
ENSTSYG00000002967CPSF39985.609ENSSDUG00000002828cpsf39685.609Seriola_dumerili
ENSTSYG00000002967CPSF39988.088ENSSDUG00000018498CPSF39888.088Seriola_dumerili
ENSTSYG00000002967CPSF39988.088ENSSLDG00000005234CPSF39888.088Seriola_lalandi_dorsalis
ENSTSYG00000002967CPSF39985.609ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSTSYG00000002967CPSF310081.287ENSSARG00000005186CPSF310081.287Sorex_araneus
ENSTSYG00000002967CPSF39892.250ENSSPUG00000015525CPSF39792.250Sphenodon_punctatus
ENSTSYG00000002967CPSF39987.794ENSSPAG00000002906CPSF39887.794Stegastes_partitus
ENSTSYG00000002967CPSF39985.567ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSTSYG00000002967CPSF39999.268ENSSSCG00000020799CPSF39999.268Sus_scrofa
ENSTSYG00000002967CPSF39995.448ENSTGUG00000013016CPSF39995.448Taeniopygia_guttata
ENSTSYG00000002967CPSF35973.219ENSTRUG00000013905CPSF39973.219Takifugu_rubripes
ENSTSYG00000002967CPSF39984.853ENSTRUG00000007030cpsf39784.853Takifugu_rubripes
ENSTSYG00000002967CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSTSYG00000002967CPSF38898.387ENSTTRG00000000861CPSF38898.387Tursiops_truncatus
ENSTSYG00000002967CPSF39996.334ENSUAMG00000007535CPSF39896.334Ursus_americanus
ENSTSYG00000002967CPSF39599.382ENSUMAG00000003676CPSF310099.382Ursus_maritimus
ENSTSYG00000002967CPSF39395.899ENSVPAG00000008041CPSF310095.899Vicugna_pacos
ENSTSYG00000002967CPSF310099.415ENSVVUG00000002194CPSF310099.415Vulpes_vulpes
ENSTSYG00000002967CPSF39990.162ENSXETG00000008263cpsf39890.162Xenopus_tropicalis
ENSTSYG00000002967CPSF39985.044ENSXCOG00000019695cpsf39985.044Xiphophorus_couchianus
ENSTSYG00000002967CPSF35479.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSTSYG00000002967CPSF39987.923ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus
ENSTSYG00000002967CPSF39984.751ENSXMAG00000009784cpsf39984.751Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us