EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000003482 (Gene tree)
Gene ID: 103265766
Gene Symbol: -
Alias: -
Full Name: replication protein A1
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 69672 bases
Position: chrKE942322.1:75795-145466
Accession: 103265766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000003191	tRNA_anti-codon	PF01336.25	4.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000003484	-	2862	XM_008063414	ENSTSYP00000003191	617 (aa)	XP_008061605	A0A1U7TUU9

Gene Model

Click here to download ENSTSYG00000003482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000003482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000003482	-	99	60.784	ENSAPOG00000011658	rpa1	99	61.552	Acanthochromis_polyacanthus
ENSTSYG00000003482	-	90	63.532	ENSAPOG00000019409	RPA1	87	63.532	Acanthochromis_polyacanthus
ENSTSYG00000003482	-	99	90.656	ENSAMEG00000007706	RPA1	98	90.656	Ailuropoda_melanoleuca
ENSTSYG00000003482	-	95	56.876	ENSACIG00000007277	rpa1	99	56.876	Amphilophus_citrinellus
ENSTSYG00000003482	-	95	57.725	ENSACIG00000012881	RPA1	99	57.725	Amphilophus_citrinellus
ENSTSYG00000003482	-	99	54.378	ENSAOCG00000009003	RPA1	99	54.685	Amphiprion_ocellaris
ENSTSYG00000003482	-	99	61.463	ENSAOCG00000023376	rpa1	99	62.478	Amphiprion_ocellaris
ENSTSYG00000003482	-	99	61.463	ENSAPEG00000008634	rpa1	99	62.478	Amphiprion_percula
ENSTSYG00000003482	-	99	53.153	ENSAPEG00000019132	RPA1	99	53.453	Amphiprion_percula
ENSTSYG00000003482	-	99	54.364	ENSATEG00000006443	RPA1	99	54.364	Anabas_testudineus
ENSTSYG00000003482	-	94	63.122	ENSATEG00000022024	rpa1	99	63.122	Anabas_testudineus
ENSTSYG00000003482	-	98	65.487	ENSAPLG00000012442	RPA1	100	65.929	Anas_platyrhynchos
ENSTSYG00000003482	-	99	62.580	ENSACAG00000014490	RPA1	99	63.065	Anolis_carolinensis
ENSTSYG00000003482	-	98	90.563	ENSANAG00000023456	RPA1	100	90.563	Aotus_nancymaae
ENSTSYG00000003482	-	93	63.826	ENSACLG00000006640	rpa1	99	63.826	Astatotilapia_calliptera
ENSTSYG00000003482	-	99	56.740	ENSACLG00000005223	RPA1	99	56.740	Astatotilapia_calliptera
ENSTSYG00000003482	-	99	61.463	ENSAMXG00000008418	rpa1	99	62.013	Astyanax_mexicanus
ENSTSYG00000003482	-	100	90.924	ENSBTAG00000009711	RPA1	100	90.924	Bos_taurus
ENSTSYG00000003482	-	100	90.438	ENSCJAG00000001848	RPA1	100	90.600	Callithrix_jacchus
ENSTSYG00000003482	-	100	90.762	ENSCAFG00000019249	RPA1	100	90.762	Canis_familiaris
ENSTSYG00000003482	-	100	90.762	ENSCAFG00020009847	RPA1	100	90.762	Canis_lupus_dingo
ENSTSYG00000003482	-	100	90.924	ENSCHIG00000026308	RPA1	100	90.924	Capra_hircus
ENSTSYG00000003482	-	100	87.682	ENSCPOG00000000035	RPA1	100	87.682	Cavia_porcellus
ENSTSYG00000003482	-	100	80.097	ENSCCAG00000010981	RPA1	100	80.097	Cebus_capucinus
ENSTSYG00000003482	-	100	84.603	ENSCLAG00000015045	-	100	84.603	Chinchilla_lanigera
ENSTSYG00000003482	-	99	89.268	ENSCLAG00000005185	-	99	89.268	Chinchilla_lanigera
ENSTSYG00000003482	-	100	79.773	ENSCSAG00000013833	RPA1	100	80.421	Chlorocebus_sabaeus
ENSTSYG00000003482	-	95	87.776	ENSCHOG00000013540	-	100	87.776	Choloepus_hoffmanni
ENSTSYG00000003482	-	71	91.800	ENSCHOG00000009454	-	100	91.800	Choloepus_hoffmanni
ENSTSYG00000003482	-	99	78.084	ENSCPBG00000020377	RPA1	99	78.634	Chrysemys_picta_bellii
ENSTSYG00000003482	-	99	41.005	ENSCING00000023482	-	98	41.005	Ciona_intestinalis
ENSTSYG00000003482	-	98	88.119	ENSCANG00000030911	RPA1	100	88.119	Colobus_angolensis_palliatus
ENSTSYG00000003482	-	99	88.368	ENSCGRG00001008197	Rpa1	99	88.368	Cricetulus_griseus_chok1gshd
ENSTSYG00000003482	-	82	87.402	ENSCGRG00000000582	Rpa1	99	87.402	Cricetulus_griseus_crigri
ENSTSYG00000003482	-	99	59.804	ENSCSEG00000013066	rpa1	99	59.804	Cynoglossus_semilaevis
ENSTSYG00000003482	-	99	50.949	ENSCSEG00000012726	RPA1	98	53.093	Cynoglossus_semilaevis
ENSTSYG00000003482	-	96	52.842	ENSCVAG00000013446	-	96	52.842	Cyprinodon_variegatus
ENSTSYG00000003482	-	99	62.255	ENSCVAG00000019431	rpa1	99	63.972	Cyprinodon_variegatus
ENSTSYG00000003482	-	99	62.825	ENSDARG00000003938	rpa1	99	62.825	Danio_rerio
ENSTSYG00000003482	-	99	90.625	ENSDNOG00000017218	RPA1	99	90.625	Dasypus_novemcinctus
ENSTSYG00000003482	-	100	89.627	ENSDORG00000006199	Rpa1	100	89.627	Dipodomys_ordii
ENSTSYG00000003482	-	99	41.827	FBgn0010173	RpA-70	98	42.628	Drosophila_melanogaster
ENSTSYG00000003482	-	83	84.536	ENSETEG00000017608	RPA1	82	84.536	Echinops_telfairi
ENSTSYG00000003482	-	98	91.874	ENSEASG00005009372	RPA1	100	89.677	Equus_asinus_asinus
ENSTSYG00000003482	-	100	91.896	ENSECAG00000023886	RPA1	100	91.896	Equus_caballus
ENSTSYG00000003482	-	68	91.429	ENSEEUG00000002186	-	68	91.429	Erinaceus_europaeus
ENSTSYG00000003482	-	88	56.250	ENSELUG00000006136	RPA1	99	56.250	Esox_lucius
ENSTSYG00000003482	-	99	60.420	ENSELUG00000021071	rpa1	99	60.518	Esox_lucius
ENSTSYG00000003482	-	100	89.482	ENSFCAG00000006306	RPA1	99	89.482	Felis_catus
ENSTSYG00000003482	-	100	75.161	ENSFALG00000006575	RPA1	99	75.161	Ficedula_albicollis
ENSTSYG00000003482	-	99	89.431	ENSFDAG00000007720	RPA1	99	89.431	Fukomys_damarensis
ENSTSYG00000003482	-	99	61.248	ENSFHEG00000003580	rpa1	99	61.248	Fundulus_heteroclitus
ENSTSYG00000003482	-	99	59.217	ENSGMOG00000010382	rpa1	99	59.217	Gadus_morhua
ENSTSYG00000003482	-	100	75.081	ENSGALG00000003072	RPA1	99	75.081	Gallus_gallus
ENSTSYG00000003482	-	99	61.741	ENSGAFG00000012916	rpa1	99	61.741	Gambusia_affinis
ENSTSYG00000003482	-	99	53.495	ENSGAFG00000020953	RPA1	99	53.799	Gambusia_affinis
ENSTSYG00000003482	-	99	60.454	ENSGACG00000010856	rpa1	99	60.454	Gasterosteus_aculeatus
ENSTSYG00000003482	-	99	77.922	ENSGAGG00000013611	RPA1	99	77.922	Gopherus_agassizii
ENSTSYG00000003482	-	100	88.817	ENSGGOG00000014186	RPA1	100	88.817	Gorilla_gorilla
ENSTSYG00000003482	-	99	62.378	ENSHBUG00000017773	rpa1	99	62.378	Haplochromis_burtoni
ENSTSYG00000003482	-	96	53.846	ENSHBUG00000009348	RPA1	99	53.846	Haplochromis_burtoni
ENSTSYG00000003482	-	99	89.268	ENSHGLG00000008846	RPA1	100	89.268	Heterocephalus_glaber_female
ENSTSYG00000003482	-	100	75.851	ENSHGLG00100002005	-	100	75.851	Heterocephalus_glaber_male
ENSTSYG00000003482	-	99	89.268	ENSHGLG00100017755	-	100	89.268	Heterocephalus_glaber_male
ENSTSYG00000003482	-	100	84.117	ENSHGLG00100000799	-	100	84.117	Heterocephalus_glaber_male
ENSTSYG00000003482	-	99	43.710	ENSHCOG00000000351	RPA1	99	43.710	Hippocampus_comes
ENSTSYG00000003482	-	99	60.359	ENSHCOG00000001401	rpa1	99	60.976	Hippocampus_comes
ENSTSYG00000003482	-	99	63.089	ENSIPUG00000004400	rpa1	99	63.089	Ictalurus_punctatus
ENSTSYG00000003482	-	98	83.087	ENSSTOG00000022475	RPA1	98	83.087	Ictidomys_tridecemlineatus
ENSTSYG00000003482	-	95	90.153	ENSJJAG00000000876	Rpa1	98	90.153	Jaculus_jaculus
ENSTSYG00000003482	-	99	61.111	ENSKMAG00000005605	rpa1	99	61.111	Kryptolebias_marmoratus
ENSTSYG00000003482	-	99	54.927	ENSKMAG00000000234	RPA1	99	54.927	Kryptolebias_marmoratus
ENSTSYG00000003482	-	96	63.098	ENSLBEG00000002281	RPA1	85	63.098	Labrus_bergylta
ENSTSYG00000003482	-	99	61.664	ENSLBEG00000021604	rpa1	99	61.664	Labrus_bergylta
ENSTSYG00000003482	-	81	67.066	ENSLACG00000007210	RPA1	99	67.066	Latimeria_chalumnae
ENSTSYG00000003482	-	99	66.992	ENSLOCG00000006397	rpa1	99	66.992	Lepisosteus_oculatus
ENSTSYG00000003482	-	99	88.084	ENSLAFG00000015354	RPA1	99	88.084	Loxodonta_africana
ENSTSYG00000003482	-	82	91.124	ENSMFAG00000036138	-	100	91.913	Macaca_fascicularis
ENSTSYG00000003482	-	98	90.924	ENSMMUG00000011604	-	100	91.584	Macaca_mulatta
ENSTSYG00000003482	-	100	84.279	ENSMMUG00000002442	-	100	84.279	Macaca_mulatta
ENSTSYG00000003482	-	88	89.333	ENSMNEG00000029837	-	100	89.333	Macaca_nemestrina
ENSTSYG00000003482	-	100	87.844	ENSMNEG00000031632	-	100	88.493	Macaca_nemestrina
ENSTSYG00000003482	-	98	84.868	ENSMLEG00000038768	-	100	85.526	Mandrillus_leucophaeus
ENSTSYG00000003482	-	99	62.092	ENSMAMG00000017993	rpa1	99	62.092	Mastacembelus_armatus
ENSTSYG00000003482	-	93	63.194	ENSMAMG00000020097	RPA1	99	52.593	Mastacembelus_armatus
ENSTSYG00000003482	-	99	62.378	ENSMZEG00005007551	rpa1	99	62.378	Maylandia_zebra
ENSTSYG00000003482	-	99	56.740	ENSMZEG00005024731	RPA1	99	56.740	Maylandia_zebra
ENSTSYG00000003482	-	99	74.959	ENSMGAG00000005315	RPA1	98	74.959	Meleagris_gallopavo
ENSTSYG00000003482	-	97	89.185	ENSMAUG00000010474	Rpa1	99	89.185	Mesocricetus_auratus
ENSTSYG00000003482	-	100	91.410	ENSMICG00000012867	RPA1	100	91.410	Microcebus_murinus
ENSTSYG00000003482	-	99	87.948	ENSMOCG00000013019	Rpa1	99	87.948	Microtus_ochrogaster
ENSTSYG00000003482	-	97	56.167	ENSMMOG00000010868	RPA1	97	59.471	Mola_mola
ENSTSYG00000003482	-	99	61.238	ENSMMOG00000014292	rpa1	99	62.458	Mola_mola
ENSTSYG00000003482	-	99	84.065	ENSMODG00000010549	RPA1	99	84.065	Monodelphis_domestica
ENSTSYG00000003482	-	94	62.358	ENSMALG00000001208	RPA1	82	62.358	Monopterus_albus
ENSTSYG00000003482	-	99	62.623	ENSMALG00000011453	rpa1	99	63.011	Monopterus_albus
ENSTSYG00000003482	-	99	87.520	MGP_CAROLIEiJ_G0016734	Rpa1	99	87.520	Mus_caroli
ENSTSYG00000003482	-	99	85.393	ENSMUSG00000000751	Rpa1	99	85.393	Mus_musculus
ENSTSYG00000003482	-	99	88.710	MGP_PahariEiJ_G0017871	Rpa1	99	88.710	Mus_pahari
ENSTSYG00000003482	-	99	85.417	MGP_SPRETEiJ_G0017577	Rpa1	99	85.417	Mus_spretus
ENSTSYG00000003482	-	100	89.789	ENSMPUG00000013119	RPA1	100	89.789	Mustela_putorius_furo
ENSTSYG00000003482	-	100	88.585	ENSMLUG00000006113	RPA1	100	88.585	Myotis_lucifugus
ENSTSYG00000003482	-	99	86.438	ENSNGAG00000004522	Rpa1	97	86.438	Nannospalax_galili
ENSTSYG00000003482	-	94	63.621	ENSNBRG00000020595	rpa1	99	63.621	Neolamprologus_brichardi
ENSTSYG00000003482	-	96	56.229	ENSNBRG00000009672	RPA1	95	56.229	Neolamprologus_brichardi
ENSTSYG00000003482	-	100	90.438	ENSNLEG00000017149	RPA1	100	91.248	Nomascus_leucogenys
ENSTSYG00000003482	-	98	73.632	ENSMEUG00000006714	RPA1	99	73.632	Notamacropus_eugenii
ENSTSYG00000003482	-	95	86.622	ENSODEG00000009038	RPA1	96	86.622	Octodon_degus
ENSTSYG00000003482	-	99	62.862	ENSONIG00000013135	rpa1	99	62.862	Oreochromis_niloticus
ENSTSYG00000003482	-	98	82.753	ENSOANG00000010880	RPA1	99	82.919	Ornithorhynchus_anatinus
ENSTSYG00000003482	-	100	87.017	ENSOCUG00000001504	RPA1	100	87.017	Oryctolagus_cuniculus
ENSTSYG00000003482	-	99	62.316	ENSORLG00000004856	rpa1	99	62.316	Oryzias_latipes
ENSTSYG00000003482	-	99	53.364	ENSORLG00000003368	RPA1	99	53.364	Oryzias_latipes
ENSTSYG00000003482	-	99	51.952	ENSORLG00020015284	RPA1	99	51.952	Oryzias_latipes_hni
ENSTSYG00000003482	-	99	62.480	ENSORLG00020008980	rpa1	99	62.480	Oryzias_latipes_hni
ENSTSYG00000003482	-	66	62.315	ENSORLG00015005867	-	92	62.315	Oryzias_latipes_hsok
ENSTSYG00000003482	-	99	62.480	ENSORLG00015013982	rpa1	99	62.480	Oryzias_latipes_hsok
ENSTSYG00000003482	-	99	53.738	ENSORLG00015020383	RPA1	99	53.738	Oryzias_latipes_hsok
ENSTSYG00000003482	-	99	53.397	ENSOMEG00000011040	RPA1	99	56.826	Oryzias_melastigma
ENSTSYG00000003482	-	99	59.706	ENSOMEG00000004704	rpa1	99	59.706	Oryzias_melastigma
ENSTSYG00000003482	-	100	90.762	ENSOGAG00000005581	-	100	90.762	Otolemur_garnettii
ENSTSYG00000003482	-	94	87.762	ENSOGAG00000029379	-	100	93.122	Otolemur_garnettii
ENSTSYG00000003482	-	100	90.924	ENSOARG00000014479	RPA1	100	90.924	Ovis_aries
ENSTSYG00000003482	-	100	91.248	ENSPPAG00000039680	RPA1	100	92.058	Pan_paniscus
ENSTSYG00000003482	-	100	89.159	ENSPPRG00000011807	RPA1	99	89.159	Panthera_pardus
ENSTSYG00000003482	-	100	88.997	ENSPTIG00000007898	RPA1	99	88.997	Panthera_tigris_altaica
ENSTSYG00000003482	-	100	91.248	ENSPTRG00000008539	RPA1	100	92.058	Pan_troglodytes
ENSTSYG00000003482	-	100	90.924	ENSPANG00000024592	RPA1	100	91.572	Papio_anubis
ENSTSYG00000003482	-	94	61.815	ENSPKIG00000008053	rpa1	94	61.880	Paramormyrops_kingsleyae
ENSTSYG00000003482	-	97	77.205	ENSPSIG00000015617	RPA1	99	77.205	Pelodiscus_sinensis
ENSTSYG00000003482	-	98	61.258	ENSPMGG00000011589	rpa1	99	61.424	Periophthalmus_magnuspinnatus
ENSTSYG00000003482	-	99	52.666	ENSPMGG00000000543	RPA1	99	55.009	Periophthalmus_magnuspinnatus
ENSTSYG00000003482	-	99	89.088	ENSPEMG00000021061	Rpa1	99	89.088	Peromyscus_maniculatus_bairdii
ENSTSYG00000003482	-	99	81.951	ENSPCIG00000019049	RPA1	99	82.305	Phascolarctos_cinereus
ENSTSYG00000003482	-	99	62.029	ENSPFOG00000003987	rpa1	99	62.029	Poecilia_formosa
ENSTSYG00000003482	-	94	53.945	ENSPLAG00000008844	-	97	53.945	Poecilia_latipinna
ENSTSYG00000003482	-	99	61.866	ENSPLAG00000004984	rpa1	99	61.866	Poecilia_latipinna
ENSTSYG00000003482	-	94	53.945	ENSPMEG00000003627	-	97	53.462	Poecilia_mexicana
ENSTSYG00000003482	-	99	62.029	ENSPMEG00000020602	rpa1	99	62.544	Poecilia_mexicana
ENSTSYG00000003482	-	94	54.359	ENSPREG00000010174	rpa1	96	54.359	Poecilia_reticulata
ENSTSYG00000003482	-	91	63.492	ENSPREG00000010119	RPA1	82	63.659	Poecilia_reticulata
ENSTSYG00000003482	-	100	92.058	ENSPCOG00000001799	RPA1	100	92.058	Propithecus_coquereli
ENSTSYG00000003482	-	100	90.600	ENSPVAG00000002149	RPA1	100	90.600	Pteropus_vampyrus
ENSTSYG00000003482	-	99	62.541	ENSPNYG00000016316	rpa1	99	63.778	Pundamilia_nyererei
ENSTSYG00000003482	-	99	56.426	ENSPNYG00000024165	RPA1	99	56.426	Pundamilia_nyererei
ENSTSYG00000003482	-	98	55.390	ENSPNAG00000008599	rpa1	99	53.760	Pygocentrus_nattereri
ENSTSYG00000003482	-	99	88.274	ENSRNOG00000003123	Rpa1	99	88.762	Rattus_norvegicus
ENSTSYG00000003482	-	100	91.248	ENSRBIG00000036587	RPA1	100	91.248	Rhinopithecus_bieti
ENSTSYG00000003482	-	100	85.900	ENSRROG00000043278	RPA1	100	85.900	Rhinopithecus_roxellana
ENSTSYG00000003482	-	97	32.020	YAR007C	RFA1	97	32.020	Saccharomyces_cerevisiae
ENSTSYG00000003482	-	98	86.612	ENSSBOG00000030233	RPA1	99	86.777	Saimiri_boliviensis_boliviensis
ENSTSYG00000003482	-	99	83.797	ENSSHAG00000007969	RPA1	98	84.124	Sarcophilus_harrisii
ENSTSYG00000003482	-	99	64.437	ENSSFOG00015005362	rpa1	92	64.437	Scleropages_formosus
ENSTSYG00000003482	-	99	52.200	ENSSMAG00000019746	RPA1	99	52.187	Scophthalmus_maximus
ENSTSYG00000003482	-	89	65.589	ENSSDUG00000016358	RPA1	86	64.853	Seriola_dumerili
ENSTSYG00000003482	-	99	63.355	ENSSDUG00000011949	rpa1	99	63.355	Seriola_dumerili
ENSTSYG00000003482	-	89	65.429	ENSSLDG00000020784	RPA1	85	64.692	Seriola_lalandi_dorsalis
ENSTSYG00000003482	-	99	63.562	ENSSLDG00000011806	rpa1	99	63.562	Seriola_lalandi_dorsalis
ENSTSYG00000003482	-	88	82.353	ENSSARG00000007506	RPA1	100	69.967	Sorex_araneus
ENSTSYG00000003482	-	97	72.483	ENSSPUG00000007223	RPA1	99	72.483	Sphenodon_punctatus
ENSTSYG00000003482	-	96	57.333	ENSSPAG00000011165	RPA1	97	57.530	Stegastes_partitus
ENSTSYG00000003482	-	99	62.092	ENSSPAG00000009903	rpa1	99	62.092	Stegastes_partitus
ENSTSYG00000003482	-	98	91.060	ENSSSCG00000017822	RPA1	100	91.060	Sus_scrofa
ENSTSYG00000003482	-	100	74.919	ENSTGUG00000005775	RPA1	99	74.919	Taeniopygia_guttata
ENSTSYG00000003482	-	99	63.054	ENSTRUG00000003616	rpa1	99	63.054	Takifugu_rubripes
ENSTSYG00000003482	-	91	63.084	ENSTRUG00000000405	RPA1	79	62.132	Takifugu_rubripes
ENSTSYG00000003482	-	99	63.328	ENSTNIG00000016199	rpa1	99	63.636	Tetraodon_nigroviridis
ENSTSYG00000003482	-	87	97.674	ENSTBEG00000002709	RPA1	89	97.674	Tupaia_belangeri
ENSTSYG00000003482	-	99	89.919	ENSTTRG00000001169	RPA1	99	90.407	Tursiops_truncatus
ENSTSYG00000003482	-	88	98.077	ENSUAMG00000015676	RPA1	97	98.077	Ursus_americanus
ENSTSYG00000003482	-	100	90.762	ENSUMAG00000009328	RPA1	100	91.086	Ursus_maritimus
ENSTSYG00000003482	-	100	89.303	ENSVPAG00000009443	RPA1	100	89.303	Vicugna_pacos
ENSTSYG00000003482	-	100	90.600	ENSVVUG00000021715	RPA1	100	90.600	Vulpes_vulpes
ENSTSYG00000003482	-	99	72.831	ENSXETG00000013538	rpa1	99	73.486	Xenopus_tropicalis
ENSTSYG00000003482	-	93	59.408	ENSXCOG00000010068	rpa1	94	60.682	Xiphophorus_couchianus
ENSTSYG00000003482	-	95	55.461	ENSXCOG00000009899	-	99	55.461	Xiphophorus_couchianus
ENSTSYG00000003482	-	91	63.492	ENSXMAG00000010333	RPA1	84	63.492	Xiphophorus_maculatus
ENSTSYG00000003482	-	99	60.393	ENSXMAG00000004102	rpa1	99	61.972	Xiphophorus_maculatus