EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTSYG00000003506 (Gene tree)
Gene ID
103269530
Gene Symbol
TRNAU1AP
Alias
FLJ20503|SECP43|TRSPAP1
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Carlito_syrichta
Status
putative
Strand
Plus strand
Length
32909 bases
Position
chrKE944412.1:324372-357280
Accession
103269530
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTSYP00000034594RRM_1PF00076.221e-2712
ENSTSYP00000034594RRM_1PF00076.221e-2722
ENSTSYP00000003209RRM_1PF00076.221.1e-2712
ENSTSYP00000003209RRM_1PF00076.221.1e-2722
ENSTSYP00000034552RRM_1PF00076.225.3e-1811
ENSTSYP00000017633RRM_1PF00076.222.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTSYT00000035814TRNAU1AP-204255-ENSTSYP0000001763384 (aa)-UPI00085AF830
ENSTSYT00000003503TRNAU1AP-201864XM_008067100ENSTSYP00000003209287 (aa)XP_008065291UPI00018B9A4D
ENSTSYT00000044765TRNAU1AP-202855-ENSTSYP00000034594284 (aa)-UPI000C2F78D2
ENSTSYT00000046760TRNAU1AP-203744-ENSTSYP00000034552247 (aa)-UPI000C2F78AB
Gene Model
Click here to download ENSTSYG00000003506's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000003506's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTSYG00000003506TRNAU1AP6134.586ENSTSYG00000004348TIAL16832.386
ENSTSYG00000003506TRNAU1AP7930.198ENSTSYG00000005276TIA16031.285
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTSYG00000003506TRNAU1AP10099.652ENSG00000180098TRNAU1AP10099.652Homo_sapiens
ENSTSYG00000003506TRNAU1AP9858.416ENSAPOG00000007148TRNAU1AP9858.416Acanthochromis_polyacanthus
ENSTSYG00000003506TRNAU1AP9065.789ENSAPOG00000007188-8167.105Acanthochromis_polyacanthus
ENSTSYG00000003506TRNAU1AP9065.789ENSAPOG00000010359-8167.105Acanthochromis_polyacanthus
ENSTSYG00000003506TRNAU1AP10098.606ENSAMEG00000011367TRNAU1AP10098.606Ailuropoda_melanoleuca
ENSTSYG00000003506TRNAU1AP9170.115ENSACIG00000004161trnau1apa9370.115Amphilophus_citrinellus
ENSTSYG00000003506TRNAU1AP9858.416ENSAOCG00000008056trnau1apa9858.416Amphiprion_ocellaris
ENSTSYG00000003506TRNAU1AP9859.322ENSAPEG00000008868trnau1apa9860.000Amphiprion_percula
ENSTSYG00000003506TRNAU1AP9659.732ENSATEG00000012140trnau1apa9856.270Anabas_testudineus
ENSTSYG00000003506TRNAU1AP9493.333ENSAPLG00000002606TRNAU1AP9993.333Anas_platyrhynchos
ENSTSYG00000003506TRNAU1AP6752.083ENSACAG00000004205-7352.083Anolis_carolinensis
ENSTSYG00000003506TRNAU1AP9385.897ENSACAG00000003995-9975.874Anolis_carolinensis
ENSTSYG00000003506TRNAU1AP10099.652ENSANAG00000018976TRNAU1AP10099.652Aotus_nancymaae
ENSTSYG00000003506TRNAU1AP9859.000ENSACLG00000018515trnau1apa9860.403Astatotilapia_calliptera
ENSTSYG00000003506TRNAU1AP9565.556ENSAMXG00000029240-9865.556Astyanax_mexicanus
ENSTSYG00000003506TRNAU1AP8372.857ENSAMXG00000013750trnau1apa9057.762Astyanax_mexicanus
ENSTSYG00000003506TRNAU1AP10099.303ENSBTAG00000010393TRNAU1AP10099.303Bos_taurus
ENSTSYG00000003506TRNAU1AP100100.000ENSCJAG00000009717TRNAU1AP100100.000Callithrix_jacchus
ENSTSYG00000003506TRNAU1AP10099.303ENSCAFG00000011735TRNAU1AP10099.303Canis_familiaris
ENSTSYG00000003506TRNAU1AP10099.303ENSCAFG00020023584TRNAU1AP10099.303Canis_lupus_dingo
ENSTSYG00000003506TRNAU1AP10099.190ENSCHIG00000023215TRNAU1AP10099.190Capra_hircus
ENSTSYG00000003506TRNAU1AP10098.955ENSCPOG00000001925TRNAU1AP10098.955Cavia_porcellus
ENSTSYG00000003506TRNAU1AP100100.000ENSCCAG00000037506TRNAU1AP100100.000Cebus_capucinus
ENSTSYG00000003506TRNAU1AP100100.000ENSCATG00000044617TRNAU1AP100100.000Cercocebus_atys
ENSTSYG00000003506TRNAU1AP10098.258ENSCLAG00000008223TRNAU1AP10098.258Chinchilla_lanigera
ENSTSYG00000003506TRNAU1AP10099.303ENSCSAG00000001014TRNAU1AP10099.303Chlorocebus_sabaeus
ENSTSYG00000003506TRNAU1AP9594.526ENSCPBG00000000121TRNAU1AP10094.526Chrysemys_picta_bellii
ENSTSYG00000003506TRNAU1AP9942.553ENSCSAVG00000011781-9050.877Ciona_savignyi
ENSTSYG00000003506TRNAU1AP10087.805ENSCANG00000041949TRNAU1AP10099.435Colobus_angolensis_palliatus
ENSTSYG00000003506TRNAU1AP10098.955ENSCGRG00001004713Trnau1ap10098.955Cricetulus_griseus_chok1gshd
ENSTSYG00000003506TRNAU1AP10098.955ENSCGRG00000014532Trnau1ap10098.955Cricetulus_griseus_crigri
ENSTSYG00000003506TRNAU1AP8771.233ENSCSEG00000006663trnau1apa9458.607Cynoglossus_semilaevis
ENSTSYG00000003506TRNAU1AP9757.823ENSCVAG00000018069trnau1apa9459.341Cyprinodon_variegatus
ENSTSYG00000003506TRNAU1AP8668.056ENSDARG00000101323trnau1apa8851.957Danio_rerio
ENSTSYG00000003506TRNAU1AP8182.353ENSDNOG00000047959-9778.610Dasypus_novemcinctus
ENSTSYG00000003506TRNAU1AP10099.303ENSDNOG00000033009TRNAU1AP10099.303Dasypus_novemcinctus
ENSTSYG00000003506TRNAU1AP9992.226ENSDORG00000006349Trnau1ap10099.567Dipodomys_ordii
ENSTSYG00000003506TRNAU1AP9651.493FBgn0031607CG154405152.023Drosophila_melanogaster
ENSTSYG00000003506TRNAU1AP8594.286ENSETEG00000012594TRNAU1AP10094.286Echinops_telfairi
ENSTSYG00000003506TRNAU1AP8962.338ENSEBUG00000009958-7862.338Eptatretus_burgeri
ENSTSYG00000003506TRNAU1AP8561.972ENSEBUG00000006349-6059.341Eptatretus_burgeri
ENSTSYG00000003506TRNAU1AP10099.652ENSEASG00005010062TRNAU1AP10099.652Equus_asinus_asinus
ENSTSYG00000003506TRNAU1AP10099.652ENSECAG00000012980TRNAU1AP10099.652Equus_caballus
ENSTSYG00000003506TRNAU1AP9663.066ENSELUG00000017686trnau1apa9462.718Esox_lucius
ENSTSYG00000003506TRNAU1AP9670.526ENSELUG00000022790-9453.814Esox_lucius
ENSTSYG00000003506TRNAU1AP10099.652ENSFCAG00000013401TRNAU1AP10099.652Felis_catus
ENSTSYG00000003506TRNAU1AP9593.431ENSFALG00000001371TRNAU1AP10093.431Ficedula_albicollis
ENSTSYG00000003506TRNAU1AP10098.258ENSFDAG00000018599TRNAU1AP10098.258Fukomys_damarensis
ENSTSYG00000003506TRNAU1AP8764.103ENSFHEG00000018232trnau1apa8656.757Fundulus_heteroclitus
ENSTSYG00000003506TRNAU1AP8763.014ENSGMOG00000016508trnau1apa9354.930Gadus_morhua
ENSTSYG00000003506TRNAU1AP6849.296ENSGALG00000012721C2H6orf529545.000Gallus_gallus
ENSTSYG00000003506TRNAU1AP10093.031ENSGALG00000001310-10093.031Gallus_gallus
ENSTSYG00000003506TRNAU1AP8765.753ENSGAFG00000004928trnau1apa9059.244Gambusia_affinis
ENSTSYG00000003506TRNAU1AP9860.274ENSGACG00000001443trnau1apa9559.932Gasterosteus_aculeatus
ENSTSYG00000003506TRNAU1AP9594.891ENSGAGG00000004940TRNAU1AP10094.891Gopherus_agassizii
ENSTSYG00000003506TRNAU1AP100100.000ENSGGOG00000003511TRNAU1AP100100.000Gorilla_gorilla
ENSTSYG00000003506TRNAU1AP8769.863ENSHBUG00000002510trnau1apa9859.406Haplochromis_burtoni
ENSTSYG00000003506TRNAU1AP10098.606ENSHGLG00000010380TRNAU1AP10098.606Heterocephalus_glaber_female
ENSTSYG00000003506TRNAU1AP10096.167ENSHGLG00100012699TRNAU1AP10096.167Heterocephalus_glaber_male
ENSTSYG00000003506TRNAU1AP9957.096ENSHCOG00000014770trnau1apa9766.429Hippocampus_comes
ENSTSYG00000003506TRNAU1AP10099.652ENSSTOG00000000079TRNAU1AP10099.652Ictidomys_tridecemlineatus
ENSTSYG00000003506TRNAU1AP10098.606ENSJJAG00000010128Trnau1ap10098.606Jaculus_jaculus
ENSTSYG00000003506TRNAU1AP9560.208ENSKMAG00000001230trnau1apa9358.478Kryptolebias_marmoratus
ENSTSYG00000003506TRNAU1AP9560.751ENSLBEG00000011683trnau1apa9359.864Labrus_bergylta
ENSTSYG00000003506TRNAU1AP9972.632ENSLACG00000005541TRNAU1AP9972.632Latimeria_chalumnae
ENSTSYG00000003506TRNAU1AP9972.028ENSLOCG00000004041trnau1apa9970.979Lepisosteus_oculatus
ENSTSYG00000003506TRNAU1AP10099.303ENSLAFG00000007628TRNAU1AP10099.303Loxodonta_africana
ENSTSYG00000003506TRNAU1AP100100.000ENSMFAG00000043751TRNAU1AP100100.000Macaca_fascicularis
ENSTSYG00000003506TRNAU1AP10099.595ENSMMUG00000006561TRNAU1AP10099.595Macaca_mulatta
ENSTSYG00000003506TRNAU1AP100100.000ENSMNEG00000044201TRNAU1AP100100.000Macaca_nemestrina
ENSTSYG00000003506TRNAU1AP100100.000ENSMLEG00000015649TRNAU1AP100100.000Mandrillus_leucophaeus
ENSTSYG00000003506TRNAU1AP8970.588ENSMAMG00000001247trnau1apa9859.790Mastacembelus_armatus
ENSTSYG00000003506TRNAU1AP9859.000ENSMZEG00005017722trnau1apa9860.403Maylandia_zebra
ENSTSYG00000003506TRNAU1AP9792.806ENSMGAG00000002105TRNAU1AP10092.806Meleagris_gallopavo
ENSTSYG00000003506TRNAU1AP100100.000ENSMICG00000008386TRNAU1AP100100.000Microcebus_murinus
ENSTSYG00000003506TRNAU1AP10098.606ENSMOCG00000011189Trnau1ap10098.606Microtus_ochrogaster
ENSTSYG00000003506TRNAU1AP8768.493ENSMMOG00000012107trnau1apa9557.194Mola_mola
ENSTSYG00000003506TRNAU1AP10095.470ENSMODG00000010927TRNAU1AP10095.470Monodelphis_domestica
ENSTSYG00000003506TRNAU1AP9661.092ENSMALG00000016778trnau1apa9458.362Monopterus_albus
ENSTSYG00000003506TRNAU1AP10098.785MGP_CAROLIEiJ_G0026563Trnau1ap100100.000Mus_caroli
ENSTSYG00000003506TRNAU1AP10098.785ENSMUSG00000028898Trnau1ap100100.000Mus_musculus
ENSTSYG00000003506TRNAU1AP10099.190MGP_PahariEiJ_G0028896Trnau1ap100100.000Mus_pahari
ENSTSYG00000003506TRNAU1AP10098.381MGP_SPRETEiJ_G0027544Trnau1ap100100.000Mus_spretus
ENSTSYG00000003506TRNAU1AP10098.955ENSMPUG00000015511TRNAU1AP10098.955Mustela_putorius_furo
ENSTSYG00000003506TRNAU1AP10099.303ENSMLUG00000012586TRNAU1AP10099.303Myotis_lucifugus
ENSTSYG00000003506TRNAU1AP10097.571ENSNGAG00000015881Trnau1ap10097.571Nannospalax_galili
ENSTSYG00000003506TRNAU1AP9562.500ENSNBRG00000001758trnau1apa9856.997Neolamprologus_brichardi
ENSTSYG00000003506TRNAU1AP100100.000ENSNLEG00000009822TRNAU1AP100100.000Nomascus_leucogenys
ENSTSYG00000003506TRNAU1AP9794.245ENSMEUG00000006117TRNAU1AP10094.245Notamacropus_eugenii
ENSTSYG00000003506TRNAU1AP8298.182ENSOPRG00000007084-6998.182Ochotona_princeps
ENSTSYG00000003506TRNAU1AP10098.606ENSODEG00000002970TRNAU1AP10098.606Octodon_degus
ENSTSYG00000003506TRNAU1AP7971.212ENSONIG00000004715trnau1apa9559.917Oreochromis_niloticus
ENSTSYG00000003506TRNAU1AP8694.444ENSOANG00000005325-9974.476Ornithorhynchus_anatinus
ENSTSYG00000003506TRNAU1AP10097.561ENSOCUG00000011704-10097.561Oryctolagus_cuniculus
ENSTSYG00000003506TRNAU1AP10077.431ENSOCUG00000002353-10077.431Oryctolagus_cuniculus
ENSTSYG00000003506TRNAU1AP9473.418ENSOCUG00000006834-10075.000Oryctolagus_cuniculus
ENSTSYG00000003506TRNAU1AP9860.215ENSORLG00000010428trnau1apa9558.363Oryzias_latipes
ENSTSYG00000003506TRNAU1AP9858.020ENSORLG00020000926trnau1ap9556.849Oryzias_latipes_hni
ENSTSYG00000003506TRNAU1AP9858.020ENSORLG00015009858trnau1ap9556.849Oryzias_latipes_hsok
ENSTSYG00000003506TRNAU1AP9859.044ENSOMEG00000007873trnau1apa9556.164Oryzias_melastigma
ENSTSYG00000003506TRNAU1AP10099.303ENSOGAG00000002274TRNAU1AP10099.303Otolemur_garnettii
ENSTSYG00000003506TRNAU1AP10098.955ENSOARG00000002843TRNAU1AP10098.955Ovis_aries
ENSTSYG00000003506TRNAU1AP100100.000ENSPPAG00000033927TRNAU1AP100100.000Pan_paniscus
ENSTSYG00000003506TRNAU1AP10099.652ENSPPRG00000004416TRNAU1AP10099.652Panthera_pardus
ENSTSYG00000003506TRNAU1AP10099.652ENSPTIG00000016677TRNAU1AP10099.652Panthera_tigris_altaica
ENSTSYG00000003506TRNAU1AP9380.812ENSPTRG00000000434-9779.336Pan_troglodytes
ENSTSYG00000003506TRNAU1AP100100.000ENSPANG00000016019TRNAU1AP100100.000Papio_anubis
ENSTSYG00000003506TRNAU1AP8772.603ENSPKIG00000015511trnau1apa9257.951Paramormyrops_kingsleyae
ENSTSYG00000003506TRNAU1AP9474.468ENSPKIG00000022205-9377.528Paramormyrops_kingsleyae
ENSTSYG00000003506TRNAU1AP9594.891ENSPSIG00000006864TRNAU1AP10094.891Pelodiscus_sinensis
ENSTSYG00000003506TRNAU1AP9462.082ENSPMGG00000023893trnau1apa9161.194Periophthalmus_magnuspinnatus
ENSTSYG00000003506TRNAU1AP10098.606ENSPEMG00000007877Trnau1ap10098.606Peromyscus_maniculatus_bairdii
ENSTSYG00000003506TRNAU1AP8560.563ENSPMAG00000005934trnau1apa9660.185Petromyzon_marinus
ENSTSYG00000003506TRNAU1AP9462.025ENSPMAG00000000592trnau1apa9760.227Petromyzon_marinus
ENSTSYG00000003506TRNAU1AP8765.753ENSPFOG00000008100trnau1apa9357.639Poecilia_formosa
ENSTSYG00000003506TRNAU1AP9156.679ENSPLAG00000010236trnau1apa9357.401Poecilia_latipinna
ENSTSYG00000003506TRNAU1AP9655.862ENSPMEG00000016387trnau1apa9256.552Poecilia_mexicana
ENSTSYG00000003506TRNAU1AP9354.373ENSPREG00000019821trnau1apa8664.286Poecilia_reticulata
ENSTSYG00000003506TRNAU1AP10090.688ENSPPYG00000001639-10090.688Pongo_abelii
ENSTSYG00000003506TRNAU1AP9895.041ENSPCOG00000023470-10095.041Propithecus_coquereli
ENSTSYG00000003506TRNAU1AP10099.303ENSPCOG00000027712-10099.303Propithecus_coquereli
ENSTSYG00000003506TRNAU1AP10099.652ENSPVAG00000017214TRNAU1AP10099.652Pteropus_vampyrus
ENSTSYG00000003506TRNAU1AP9864.634ENSPNYG00000010130trnau1apa9859.406Pundamilia_nyererei
ENSTSYG00000003506TRNAU1AP8769.863ENSPNAG00000024905trnau1apa9154.804Pygocentrus_nattereri
ENSTSYG00000003506TRNAU1AP89100.000ENSRNOG00000055344Trnau1ap9290.406Rattus_norvegicus
ENSTSYG00000003506TRNAU1AP100100.000ENSRBIG00000029083TRNAU1AP100100.000Rhinopithecus_bieti
ENSTSYG00000003506TRNAU1AP100100.000ENSRROG00000029128TRNAU1AP100100.000Rhinopithecus_roxellana
ENSTSYG00000003506TRNAU1AP100100.000ENSSBOG00000021299TRNAU1AP100100.000Saimiri_boliviensis_boliviensis
ENSTSYG00000003506TRNAU1AP10094.774ENSSHAG00000008108TRNAU1AP10094.774Sarcophilus_harrisii
ENSTSYG00000003506TRNAU1AP9855.738ENSSMAG00000020851trnau1apa9857.049Scophthalmus_maximus
ENSTSYG00000003506TRNAU1AP8769.863ENSSDUG00000011734trnau1apa9457.483Seriola_dumerili
ENSTSYG00000003506TRNAU1AP8769.863ENSSLDG00000012101trnau1apa9260.851Seriola_lalandi_dorsalis
ENSTSYG00000003506TRNAU1AP9798.201ENSSARG00000007536TRNAU1AP10098.201Sorex_araneus
ENSTSYG00000003506TRNAU1AP6182.386ENSSPUG00000010415-10082.386Sphenodon_punctatus
ENSTSYG00000003506TRNAU1AP9986.364ENSSPUG00000010400-10086.364Sphenodon_punctatus
ENSTSYG00000003506TRNAU1AP9858.689ENSSPAG00000005029trnau1apa9857.980Stegastes_partitus
ENSTSYG00000003506TRNAU1AP10099.652ENSSSCG00000030284TRNAU1AP10099.652Sus_scrofa
ENSTSYG00000003506TRNAU1AP6853.061ENSTGUG00000005908-10053.061Taeniopygia_guttata
ENSTSYG00000003506TRNAU1AP9793.885ENSTGUG00000000735-10093.885Taeniopygia_guttata
ENSTSYG00000003506TRNAU1AP9859.136ENSTRUG00000003352trnau1apa9858.472Takifugu_rubripes
ENSTSYG00000003506TRNAU1AP9857.096ENSTNIG00000006129trnau1apa9857.096Tetraodon_nigroviridis
ENSTSYG00000003506TRNAU1AP8587.755ENSTBEG00000008049-10087.755Tupaia_belangeri
ENSTSYG00000003506TRNAU1AP10099.303ENSTTRG00000001854TRNAU1AP10099.303Tursiops_truncatus
ENSTSYG00000003506TRNAU1AP9599.270ENSUAMG00000008789TRNAU1AP10099.270Ursus_americanus
ENSTSYG00000003506TRNAU1AP10098.955ENSUMAG00000011068TRNAU1AP10098.955Ursus_maritimus
ENSTSYG00000003506TRNAU1AP10088.699ENSVPAG00000006778TRNAU1AP10088.699Vicugna_pacos
ENSTSYG00000003506TRNAU1AP9997.535ENSVVUG00000012518TRNAU1AP9397.535Vulpes_vulpes
ENSTSYG00000003506TRNAU1AP8765.753ENSXMAG00000017361trnau1apa9357.639Xiphophorus_maculatus

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