EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000003517 (Gene tree)
Gene ID: 103255272
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 38354 bases
Position: chrKE935554.1:30049-68402
Accession: 103255272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000022839	PRP4	PF08799.11	1.1e-13	1	1
ENSTSYP00000003225	PRP4	PF08799.11	1.2e-13	1	1
ENSTSYP00000022839	Prp18	PF02840.15	5.3e-63	1	1
ENSTSYP00000003225	Prp18	PF02840.15	6.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000048362	-	1690	XM_008053240	ENSTSYP00000022839	342 (aa)	XP_008051431	A0A1U7TCB7
ENSTSYT00000003519	-	1681	XM_008053239	ENSTSYP00000003225	351 (aa)	XP_008051430	A0A1U7T0X2

Gene Model

Click here to download ENSTSYG00000003517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000003517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000003517	-	100	99.123	ENSG00000165630	PRPF18	100	99.123	Homo_sapiens
ENSTSYG00000003517	-	100	85.088	ENSAPOG00000024177	prpf18	100	85.088	Acanthochromis_polyacanthus
ENSTSYG00000003517	-	100	98.538	ENSAMEG00000013591	-	100	98.538	Ailuropoda_melanoleuca
ENSTSYG00000003517	-	100	83.918	ENSACIG00000001186	prpf18	100	83.918	Amphilophus_citrinellus
ENSTSYG00000003517	-	98	85.075	ENSAOCG00000006572	prpf18	94	83.382	Amphiprion_ocellaris
ENSTSYG00000003517	-	100	85.380	ENSAPEG00000004564	prpf18	100	85.380	Amphiprion_percula
ENSTSYG00000003517	-	100	83.918	ENSATEG00000000303	prpf18	100	83.918	Anabas_testudineus
ENSTSYG00000003517	-	99	90.882	ENSAPLG00000003387	-	99	90.882	Anas_platyrhynchos
ENSTSYG00000003517	-	100	90.988	ENSACAG00000000818	-	100	90.988	Anolis_carolinensis
ENSTSYG00000003517	-	100	98.575	ENSANAG00000037445	-	100	98.575	Aotus_nancymaae
ENSTSYG00000003517	-	100	84.795	ENSACLG00000026296	prpf18	100	84.795	Astatotilapia_calliptera
ENSTSYG00000003517	-	100	83.476	ENSAMXG00000012848	prpf18	100	83.476	Astyanax_mexicanus
ENSTSYG00000003517	-	100	98.291	ENSBTAG00000017244	PRPF18	100	98.291	Bos_taurus
ENSTSYG00000003517	-	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSTSYG00000003517	-	100	98.575	ENSCJAG00000009432	-	100	98.575	Callithrix_jacchus
ENSTSYG00000003517	-	100	98.538	ENSCAFG00000004735	-	100	98.538	Canis_familiaris
ENSTSYG00000003517	-	100	98.538	ENSCAFG00020007712	-	100	98.538	Canis_lupus_dingo
ENSTSYG00000003517	-	100	98.291	ENSCHIG00000000499	-	100	98.291	Capra_hircus
ENSTSYG00000003517	-	100	99.123	ENSCPOG00000021069	-	100	99.123	Cavia_porcellus
ENSTSYG00000003517	-	100	98.575	ENSCCAG00000036822	-	100	98.575	Cebus_capucinus
ENSTSYG00000003517	-	100	88.012	ENSCATG00000016633	-	100	88.012	Cercocebus_atys
ENSTSYG00000003517	-	100	98.246	ENSCLAG00000011770	-	100	98.246	Chinchilla_lanigera
ENSTSYG00000003517	-	100	99.145	ENSCSAG00000013109	-	100	99.145	Chlorocebus_sabaeus
ENSTSYG00000003517	-	100	88.483	ENSCPBG00000003100	-	100	89.045	Chrysemys_picta_bellii
ENSTSYG00000003517	-	99	55.294	ENSCING00000020481	-	97	55.294	Ciona_intestinalis
ENSTSYG00000003517	-	99	54.651	ENSCSAVG00000010546	-	99	54.360	Ciona_savignyi
ENSTSYG00000003517	-	100	98.860	ENSCANG00000034900	-	100	98.860	Colobus_angolensis_palliatus
ENSTSYG00000003517	-	100	98.538	ENSCGRG00001023665	Prpf18	100	98.538	Cricetulus_griseus_chok1gshd
ENSTSYG00000003517	-	100	98.538	ENSCGRG00000014690	Prpf18	100	98.538	Cricetulus_griseus_crigri
ENSTSYG00000003517	-	100	82.456	ENSCSEG00000005536	prpf18	99	82.456	Cynoglossus_semilaevis
ENSTSYG00000003517	-	100	83.918	ENSCVAG00000012401	prpf18	100	83.918	Cyprinodon_variegatus
ENSTSYG00000003517	-	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSTSYG00000003517	-	100	97.953	ENSDNOG00000035607	-	100	97.953	Dasypus_novemcinctus
ENSTSYG00000003517	-	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSTSYG00000003517	-	99	51.622	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSTSYG00000003517	-	100	87.135	ENSETEG00000015060	-	100	87.135	Echinops_telfairi
ENSTSYG00000003517	-	100	66.571	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSTSYG00000003517	-	100	98.860	ENSEASG00005019373	-	100	98.860	Equus_asinus_asinus
ENSTSYG00000003517	-	100	98.860	ENSECAG00000006997	PRPF18	100	98.860	Equus_caballus
ENSTSYG00000003517	-	92	62.025	ENSEEUG00000001171	-	100	62.025	Erinaceus_europaeus
ENSTSYG00000003517	-	100	81.633	ENSELUG00000022190	prpf18	100	81.633	Esox_lucius
ENSTSYG00000003517	-	100	98.291	ENSFCAG00000004436	-	100	98.291	Felis_catus
ENSTSYG00000003517	-	93	90.462	ENSFALG00000001912	-	97	90.462	Ficedula_albicollis
ENSTSYG00000003517	-	99	64.638	ENSFDAG00000010713	-	97	64.638	Fukomys_damarensis
ENSTSYG00000003517	-	94	98.438	ENSFDAG00000014026	-	100	98.438	Fukomys_damarensis
ENSTSYG00000003517	-	80	89.011	ENSFHEG00000020125	prpf18	98	89.139	Fundulus_heteroclitus
ENSTSYG00000003517	-	99	79.472	ENSGMOG00000012210	prpf18	99	79.472	Gadus_morhua
ENSTSYG00000003517	-	100	91.813	ENSGALG00000043593	-	100	91.813	Gallus_gallus
ENSTSYG00000003517	-	100	83.041	ENSGAFG00000006034	prpf18	100	83.041	Gambusia_affinis
ENSTSYG00000003517	-	100	81.287	ENSGACG00000012232	prpf18	100	81.287	Gasterosteus_aculeatus
ENSTSYG00000003517	-	100	92.398	ENSGAGG00000016878	-	100	92.398	Gopherus_agassizii
ENSTSYG00000003517	-	93	99.077	ENSGGOG00000025188	-	96	99.077	Gorilla_gorilla
ENSTSYG00000003517	-	100	84.795	ENSHBUG00000010264	prpf18	100	84.795	Haplochromis_burtoni
ENSTSYG00000003517	-	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSTSYG00000003517	-	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSTSYG00000003517	-	100	84.211	ENSHCOG00000015987	prpf18	100	84.211	Hippocampus_comes
ENSTSYG00000003517	-	100	81.303	ENSIPUG00000007432	prpf18	100	82.153	Ictalurus_punctatus
ENSTSYG00000003517	-	100	97.661	ENSSTOG00000008735	-	100	97.661	Ictidomys_tridecemlineatus
ENSTSYG00000003517	-	100	72.046	ENSJJAG00000015191	-	100	72.046	Jaculus_jaculus
ENSTSYG00000003517	-	100	99.123	ENSJJAG00000024041	-	100	99.123	Jaculus_jaculus
ENSTSYG00000003517	-	100	82.749	ENSKMAG00000012124	prpf18	100	82.749	Kryptolebias_marmoratus
ENSTSYG00000003517	-	99	83.136	ENSLBEG00000028466	prpf18	99	83.136	Labrus_bergylta
ENSTSYG00000003517	-	100	86.550	ENSLACG00000009885	prpf18	100	86.550	Latimeria_chalumnae
ENSTSYG00000003517	-	100	89.766	ENSLOCG00000016736	prpf18	100	89.766	Lepisosteus_oculatus
ENSTSYG00000003517	-	100	99.123	ENSLAFG00000007753	-	100	99.123	Loxodonta_africana
ENSTSYG00000003517	-	100	99.145	ENSMFAG00000000540	-	100	99.145	Macaca_fascicularis
ENSTSYG00000003517	-	100	99.145	ENSMMUG00000015071	PRPF18	100	99.145	Macaca_mulatta
ENSTSYG00000003517	-	100	99.145	ENSMNEG00000024679	-	100	99.145	Macaca_nemestrina
ENSTSYG00000003517	-	100	83.918	ENSMLEG00000031715	-	100	83.918	Mandrillus_leucophaeus
ENSTSYG00000003517	-	100	83.041	ENSMAMG00000006610	prpf18	100	83.041	Mastacembelus_armatus
ENSTSYG00000003517	-	100	84.795	ENSMZEG00005019392	prpf18	100	84.795	Maylandia_zebra
ENSTSYG00000003517	-	100	91.813	ENSMGAG00000005023	-	100	91.813	Meleagris_gallopavo
ENSTSYG00000003517	-	100	98.860	ENSMICG00000006572	-	100	98.860	Microcebus_murinus
ENSTSYG00000003517	-	100	99.123	ENSMOCG00000021468	Prpf18	100	99.123	Microtus_ochrogaster
ENSTSYG00000003517	-	100	82.456	ENSMMOG00000013012	prpf18	100	82.456	Mola_mola
ENSTSYG00000003517	-	100	85.380	ENSMODG00000024043	-	100	85.380	Monodelphis_domestica
ENSTSYG00000003517	-	96	92.308	ENSMODG00000016902	-	92	92.308	Monodelphis_domestica
ENSTSYG00000003517	-	100	78.161	ENSMALG00000005486	prpf18	100	78.448	Monopterus_albus
ENSTSYG00000003517	-	100	98.538	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSTSYG00000003517	-	100	98.246	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSTSYG00000003517	-	100	98.830	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSTSYG00000003517	-	100	98.246	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSTSYG00000003517	-	100	98.246	ENSMPUG00000000938	-	100	98.246	Mustela_putorius_furo
ENSTSYG00000003517	-	100	98.246	ENSMLUG00000009200	-	100	98.246	Myotis_lucifugus
ENSTSYG00000003517	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSTSYG00000003517	-	100	98.538	ENSNGAG00000012500	-	100	98.538	Nannospalax_galili
ENSTSYG00000003517	-	100	84.795	ENSNBRG00000001778	prpf18	100	84.795	Neolamprologus_brichardi
ENSTSYG00000003517	-	100	99.145	ENSNLEG00000012186	-	100	99.145	Nomascus_leucogenys
ENSTSYG00000003517	-	76	79.537	ENSMEUG00000005032	-	75	79.537	Notamacropus_eugenii
ENSTSYG00000003517	-	77	80.377	ENSOPRG00000002153	-	100	80.377	Ochotona_princeps
ENSTSYG00000003517	-	100	98.830	ENSODEG00000003770	-	100	98.830	Octodon_degus
ENSTSYG00000003517	-	98	84.179	ENSONIG00000014854	prpf18	96	84.179	Oreochromis_niloticus
ENSTSYG00000003517	-	100	93.860	ENSOANG00000015404	-	100	93.860	Ornithorhynchus_anatinus
ENSTSYG00000003517	-	100	98.830	ENSOCUG00000027756	-	100	94.737	Oryctolagus_cuniculus
ENSTSYG00000003517	-	100	82.051	ENSORLG00000010293	prpf18	100	82.051	Oryzias_latipes
ENSTSYG00000003517	-	100	83.626	ENSORLG00020001530	prpf18	100	83.626	Oryzias_latipes_hni
ENSTSYG00000003517	-	100	83.333	ENSORLG00015013705	prpf18	100	83.333	Oryzias_latipes_hsok
ENSTSYG00000003517	-	100	84.795	ENSOMEG00000009167	prpf18	100	84.795	Oryzias_melastigma
ENSTSYG00000003517	-	100	97.953	ENSOGAG00000007294	-	100	97.953	Otolemur_garnettii
ENSTSYG00000003517	-	100	98.291	ENSOARG00000006243	-	100	98.291	Ovis_aries
ENSTSYG00000003517	-	100	99.145	ENSPPAG00000041959	-	100	99.145	Pan_paniscus
ENSTSYG00000003517	-	100	98.246	ENSPPRG00000000107	-	100	98.246	Panthera_pardus
ENSTSYG00000003517	-	100	97.953	ENSPTIG00000021094	-	100	97.953	Panthera_tigris_altaica
ENSTSYG00000003517	-	100	99.145	ENSPTRG00000002306	PRPF18	100	99.145	Pan_troglodytes
ENSTSYG00000003517	-	100	99.430	ENSPANG00000023346	-	100	99.430	Papio_anubis
ENSTSYG00000003517	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.621	Paramormyrops_kingsleyae
ENSTSYG00000003517	-	100	92.105	ENSPSIG00000016064	-	100	92.105	Pelodiscus_sinensis
ENSTSYG00000003517	-	100	78.363	ENSPMGG00000016486	prpf18	100	78.363	Periophthalmus_magnuspinnatus
ENSTSYG00000003517	-	100	98.830	ENSPEMG00000013704	Prpf18	100	98.830	Peromyscus_maniculatus_bairdii
ENSTSYG00000003517	-	100	73.988	ENSPMAG00000000204	prpf18	100	73.988	Petromyzon_marinus
ENSTSYG00000003517	-	93	95.692	ENSPCIG00000012963	-	99	95.886	Phascolarctos_cinereus
ENSTSYG00000003517	-	100	81.766	ENSPFOG00000017611	prpf18	100	81.766	Poecilia_formosa
ENSTSYG00000003517	-	100	83.333	ENSPLAG00000000369	prpf18	100	83.333	Poecilia_latipinna
ENSTSYG00000003517	-	100	83.333	ENSPMEG00000005183	prpf18	100	83.333	Poecilia_mexicana
ENSTSYG00000003517	-	100	82.749	ENSPREG00000015232	prpf18	100	82.749	Poecilia_reticulata
ENSTSYG00000003517	-	100	98.830	ENSPPYG00000002101	PRPF18	100	98.830	Pongo_abelii
ENSTSYG00000003517	-	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSTSYG00000003517	-	100	91.813	ENSPCOG00000013057	-	100	91.813	Propithecus_coquereli
ENSTSYG00000003517	-	100	60.819	ENSPVAG00000002947	-	100	60.819	Pteropus_vampyrus
ENSTSYG00000003517	-	100	84.795	ENSPNYG00000003554	prpf18	100	84.795	Pundamilia_nyererei
ENSTSYG00000003517	-	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSTSYG00000003517	-	100	97.953	ENSRNOG00000018396	Prpf18	100	97.953	Rattus_norvegicus
ENSTSYG00000003517	-	100	98.575	ENSRBIG00000028028	-	100	98.575	Rhinopithecus_bieti
ENSTSYG00000003517	-	100	98.860	ENSRROG00000040695	-	100	98.860	Rhinopithecus_roxellana
ENSTSYG00000003517	-	100	98.575	ENSSBOG00000034482	-	100	98.575	Saimiri_boliviensis_boliviensis
ENSTSYG00000003517	-	100	95.906	ENSSHAG00000016463	-	100	95.906	Sarcophilus_harrisii
ENSTSYG00000003517	-	100	76.901	ENSSHAG00000009669	-	100	76.901	Sarcophilus_harrisii
ENSTSYG00000003517	-	98	82.319	ENSSFOG00015022118	prpf18	100	76.657	Scleropages_formosus
ENSTSYG00000003517	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSTSYG00000003517	-	100	82.749	ENSSMAG00000005308	prpf18	100	82.749	Scophthalmus_maximus
ENSTSYG00000003517	-	100	84.795	ENSSDUG00000015428	prpf18	100	84.795	Seriola_dumerili
ENSTSYG00000003517	-	100	84.795	ENSSLDG00000023989	prpf18	100	84.795	Seriola_lalandi_dorsalis
ENSTSYG00000003517	-	100	68.713	ENSSARG00000005307	-	100	68.713	Sorex_araneus
ENSTSYG00000003517	-	100	91.813	ENSSPUG00000002619	-	100	91.813	Sphenodon_punctatus
ENSTSYG00000003517	-	100	84.211	ENSSPAG00000019502	prpf18	100	84.211	Stegastes_partitus
ENSTSYG00000003517	-	100	98.575	ENSSSCG00000026354	-	100	98.575	Sus_scrofa
ENSTSYG00000003517	-	100	91.520	ENSTGUG00000002286	-	100	91.520	Taeniopygia_guttata
ENSTSYG00000003517	-	100	81.871	ENSTRUG00000011278	prpf18	100	81.871	Takifugu_rubripes
ENSTSYG00000003517	-	100	82.164	ENSTNIG00000000911	prpf18	100	82.164	Tetraodon_nigroviridis
ENSTSYG00000003517	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSTSYG00000003517	-	100	98.830	ENSTTRG00000011117	PRPF18	100	98.830	Tursiops_truncatus
ENSTSYG00000003517	-	95	95.385	ENSUAMG00000001815	-	94	95.385	Ursus_americanus
ENSTSYG00000003517	-	100	93.567	ENSUMAG00000012329	-	100	93.567	Ursus_maritimus
ENSTSYG00000003517	-	100	92.982	ENSVPAG00000011486	-	100	92.982	Vicugna_pacos
ENSTSYG00000003517	-	100	98.575	ENSVVUG00000005453	-	100	98.575	Vulpes_vulpes
ENSTSYG00000003517	-	100	80.290	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSTSYG00000003517	-	100	82.558	ENSXCOG00000020414	prpf18	100	82.558	Xiphophorus_couchianus
ENSTSYG00000003517	-	100	83.041	ENSXMAG00000004713	prpf18	91	83.041	Xiphophorus_maculatus