EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTSYG00000004099 (Gene tree)
Gene ID: 103261519
Gene Symbol: SMG5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 34852 bases
Position: chrKE926758.1:32050-66901
Accession: 103261519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000003747	EST1	PF10374.9	8.7e-24	1	1
ENSTSYP00000003747	EST1_DNA_bind	PF10373.9	1.7e-40	1	2
ENSTSYP00000003747	EST1_DNA_bind	PF10373.9	1.7e-40	2	2
ENSTSYP00000003747	PIN_4	PF13638.6	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000004096	SMG5-201	4558	XM_008059142	ENSTSYP00000003747	1017 (aa)	XP_008057333	A0A1U7TLP9

Gene Model

Click here to download ENSTSYG00000004099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000004099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000004099	SMG5	100	97.050	ENSG00000198952	SMG5	100	97.050	Homo_sapiens
ENSTSYG00000004099	SMG5	99	67.808	ENSAPOG00000019690	smg5	99	67.353	Acanthochromis_polyacanthus
ENSTSYG00000004099	SMG5	98	92.447	ENSAMEG00000014458	SMG5	100	92.447	Ailuropoda_melanoleuca
ENSTSYG00000004099	SMG5	99	64.442	ENSACIG00000001353	smg5	99	66.059	Amphilophus_citrinellus
ENSTSYG00000004099	SMG5	98	64.764	ENSAOCG00000019483	smg5	99	61.621	Amphiprion_ocellaris
ENSTSYG00000004099	SMG5	98	66.501	ENSAPEG00000022949	smg5	98	66.800	Amphiprion_percula
ENSTSYG00000004099	SMG5	99	66.538	ENSATEG00000005348	smg5	99	66.474	Anabas_testudineus
ENSTSYG00000004099	SMG5	98	78.829	ENSAPLG00000010263	SMG5	100	78.537	Anas_platyrhynchos
ENSTSYG00000004099	SMG5	100	96.559	ENSANAG00000032899	SMG5	100	96.559	Aotus_nancymaae
ENSTSYG00000004099	SMG5	99	64.621	ENSACLG00000009311	smg5	99	66.667	Astatotilapia_calliptera
ENSTSYG00000004099	SMG5	99	43.877	ENSBTAG00000021747	-	99	43.533	Bos_taurus
ENSTSYG00000004099	SMG5	100	94.985	ENSBTAG00000009435	SMG5	100	94.985	Bos_taurus
ENSTSYG00000004099	SMG5	100	96.559	ENSCJAG00000005684	SMG5	100	96.559	Callithrix_jacchus
ENSTSYG00000004099	SMG5	100	94.297	ENSCAFG00000016839	SMG5	100	94.297	Canis_familiaris
ENSTSYG00000004099	SMG5	100	94.297	ENSCAFG00020006061	SMG5	100	94.297	Canis_lupus_dingo
ENSTSYG00000004099	SMG5	100	93.805	ENSCHIG00000007709	SMG5	100	94.789	Capra_hircus
ENSTSYG00000004099	SMG5	99	44.141	ENSCHIG00000006323	-	99	44.423	Capra_hircus
ENSTSYG00000004099	SMG5	97	72.644	ENSCAPG00000003631	SMG5	100	73.237	Cavia_aperea
ENSTSYG00000004099	SMG5	100	94.014	ENSCPOG00000015696	SMG5	100	93.719	Cavia_porcellus
ENSTSYG00000004099	SMG5	100	96.559	ENSCCAG00000027409	SMG5	100	96.559	Cebus_capucinus
ENSTSYG00000004099	SMG5	100	97.247	ENSCATG00000030539	SMG5	100	97.247	Cercocebus_atys
ENSTSYG00000004099	SMG5	100	94.406	ENSCLAG00000003983	SMG5	100	95.584	Chinchilla_lanigera
ENSTSYG00000004099	SMG5	100	97.148	ENSCSAG00000002120	SMG5	100	97.148	Chlorocebus_sabaeus
ENSTSYG00000004099	SMG5	54	93.066	ENSCHOG00000008741	-	57	93.066	Choloepus_hoffmanni
ENSTSYG00000004099	SMG5	94	78.723	ENSCPBG00000025848	SMG5	100	78.398	Chrysemys_picta_bellii
ENSTSYG00000004099	SMG5	94	35.000	ENSCING00000008706	-	99	34.545	Ciona_intestinalis
ENSTSYG00000004099	SMG5	100	92.920	ENSCANG00000029208	SMG5	100	92.920	Colobus_angolensis_palliatus
ENSTSYG00000004099	SMG5	100	91.462	ENSCGRG00001006336	Smg5	100	91.266	Cricetulus_griseus_chok1gshd
ENSTSYG00000004099	SMG5	54	45.936	ENSCGRG00001000584	-	98	45.878	Cricetulus_griseus_chok1gshd
ENSTSYG00000004099	SMG5	98	91.457	ENSCGRG00000005111	Smg5	100	91.247	Cricetulus_griseus_crigri
ENSTSYG00000004099	SMG5	99	65.294	ENSCSEG00000014220	smg5	99	65.588	Cynoglossus_semilaevis
ENSTSYG00000004099	SMG5	99	60.954	ENSCVAG00000000529	smg5	99	61.650	Cyprinodon_variegatus
ENSTSYG00000004099	SMG5	100	90.462	ENSDNOG00000000051	SMG5	100	91.544	Dasypus_novemcinctus
ENSTSYG00000004099	SMG5	92	36.440	ENSDNOG00000039862	-	100	35.924	Dasypus_novemcinctus
ENSTSYG00000004099	SMG5	100	93.621	ENSDORG00000010382	Smg5	100	93.229	Dipodomys_ordii
ENSTSYG00000004099	SMG5	66	36.129	FBgn0019890	Smg5	62	36.129	Drosophila_melanogaster
ENSTSYG00000004099	SMG5	82	97.087	ENSETEG00000010336	SMG5	83	97.087	Echinops_telfairi
ENSTSYG00000004099	SMG5	90	46.978	ENSEBUG00000003739	smg5	98	47.458	Eptatretus_burgeri
ENSTSYG00000004099	SMG5	100	96.460	ENSEASG00005019122	SMG5	100	96.460	Equus_asinus_asinus
ENSTSYG00000004099	SMG5	100	96.460	ENSECAG00000001389	SMG5	100	96.460	Equus_caballus
ENSTSYG00000004099	SMG5	72	98.559	ENSEEUG00000012690	SMG5	73	98.559	Erinaceus_europaeus
ENSTSYG00000004099	SMG5	99	65.734	ENSELUG00000012585	smg5	99	65.643	Esox_lucius
ENSTSYG00000004099	SMG5	100	93.805	ENSFCAG00000011783	SMG5	100	93.811	Felis_catus
ENSTSYG00000004099	SMG5	58	82.167	ENSFALG00000001166	-	99	82.107	Ficedula_albicollis
ENSTSYG00000004099	SMG5	98	92.656	ENSFDAG00000017388	SMG5	100	91.650	Fukomys_damarensis
ENSTSYG00000004099	SMG5	97	62.312	ENSFHEG00000013939	smg5	95	68.182	Fundulus_heteroclitus
ENSTSYG00000004099	SMG5	99	62.145	ENSGMOG00000007310	smg5	93	76.310	Gadus_morhua
ENSTSYG00000004099	SMG5	99	77.842	ENSGALG00000029918	-	100	77.429	Gallus_gallus
ENSTSYG00000004099	SMG5	72	77.594	ENSGAFG00000021691	smg5	96	67.093	Gambusia_affinis
ENSTSYG00000004099	SMG5	99	62.206	ENSGACG00000013142	smg5	99	61.754	Gasterosteus_aculeatus
ENSTSYG00000004099	SMG5	100	79.412	ENSGAGG00000016131	SMG5	100	79.202	Gopherus_agassizii
ENSTSYG00000004099	SMG5	100	97.050	ENSGGOG00000010932	SMG5	100	97.050	Gorilla_gorilla
ENSTSYG00000004099	SMG5	99	64.723	ENSHBUG00000008654	smg5	99	66.097	Haplochromis_burtoni
ENSTSYG00000004099	SMG5	100	92.738	ENSHGLG00000019152	SMG5	100	92.934	Heterocephalus_glaber_female
ENSTSYG00000004099	SMG5	90	92.670	ENSHGLG00100015948	SMG5	99	92.888	Heterocephalus_glaber_male
ENSTSYG00000004099	SMG5	86	74.083	ENSHCOG00000010229	smg5	83	78.571	Hippocampus_comes
ENSTSYG00000004099	SMG5	99	60.307	ENSIPUG00000006624	Smg5	99	61.783	Ictalurus_punctatus
ENSTSYG00000004099	SMG5	100	95.972	ENSSTOG00000001780	SMG5	100	95.972	Ictidomys_tridecemlineatus
ENSTSYG00000004099	SMG5	100	92.647	ENSJJAG00000022763	Smg5	100	92.542	Jaculus_jaculus
ENSTSYG00000004099	SMG5	50	59.158	ENSKMAG00000014586	smg5	99	61.634	Kryptolebias_marmoratus
ENSTSYG00000004099	SMG5	99	66.056	ENSLBEG00000002145	smg5	99	66.409	Labrus_bergylta
ENSTSYG00000004099	SMG5	100	64.550	ENSLACG00000010521	SMG5	100	64.986	Latimeria_chalumnae
ENSTSYG00000004099	SMG5	95	78.960	ENSLOCG00000008380	smg5	99	61.654	Lepisosteus_oculatus
ENSTSYG00000004099	SMG5	100	94.199	ENSLAFG00000006241	SMG5	100	93.314	Loxodonta_africana
ENSTSYG00000004099	SMG5	100	97.148	ENSMFAG00000045357	SMG5	100	97.148	Macaca_fascicularis
ENSTSYG00000004099	SMG5	100	97.148	ENSMMUG00000000090	SMG5	100	97.148	Macaca_mulatta
ENSTSYG00000004099	SMG5	100	97.050	ENSMNEG00000044425	SMG5	100	97.050	Macaca_nemestrina
ENSTSYG00000004099	SMG5	100	89.716	ENSMLEG00000041192	SMG5	100	90.891	Mandrillus_leucophaeus
ENSTSYG00000004099	SMG5	99	61.106	ENSMAMG00000010683	smg5	92	79.444	Mastacembelus_armatus
ENSTSYG00000004099	SMG5	63	58.921	ENSMZEG00005016543	smg5	100	60.150	Maylandia_zebra
ENSTSYG00000004099	SMG5	99	63.118	ENSMZEG00005015815	smg5	99	65.172	Maylandia_zebra
ENSTSYG00000004099	SMG5	55	44.560	ENSMAUG00000000043	-	96	44.618	Mesocricetus_auratus
ENSTSYG00000004099	SMG5	100	90.579	ENSMAUG00000010381	Smg5	100	90.383	Mesocricetus_auratus
ENSTSYG00000004099	SMG5	100	96.559	ENSMICG00000002257	SMG5	100	96.559	Microcebus_murinus
ENSTSYG00000004099	SMG5	100	90.500	ENSMOCG00000016590	Smg5	100	90.304	Microtus_ochrogaster
ENSTSYG00000004099	SMG5	99	58.876	ENSMMOG00000017199	smg5	99	59.714	Mola_mola
ENSTSYG00000004099	SMG5	87	89.651	ENSMODG00000016901	SMG5	98	90.101	Monodelphis_domestica
ENSTSYG00000004099	SMG5	97	34.886	ENSMODG00000004511	-	99	34.390	Monodelphis_domestica
ENSTSYG00000004099	SMG5	78	37.783	ENSMODG00000010675	-	84	37.931	Monodelphis_domestica
ENSTSYG00000004099	SMG5	82	37.317	ENSMODG00000004532	-	83	37.940	Monodelphis_domestica
ENSTSYG00000004099	SMG5	75	39.633	ENSMODG00000004735	-	86	39.733	Monodelphis_domestica
ENSTSYG00000004099	SMG5	99	60.676	ENSMALG00000010375	smg5	93	75.822	Monopterus_albus
ENSTSYG00000004099	SMG5	100	91.757	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSTSYG00000004099	SMG5	100	91.855	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSTSYG00000004099	SMG5	100	91.471	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSTSYG00000004099	SMG5	100	91.757	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSTSYG00000004099	SMG5	94	92.744	ENSMPUG00000004546	SMG5	100	92.744	Mustela_putorius_furo
ENSTSYG00000004099	SMG5	100	93.255	ENSMLUG00000008518	SMG5	100	93.255	Myotis_lucifugus
ENSTSYG00000004099	SMG5	100	93.517	ENSNGAG00000020706	Smg5	100	93.222	Nannospalax_galili
ENSTSYG00000004099	SMG5	98	43.944	ENSNGAG00000012101	-	98	44.389	Nannospalax_galili
ENSTSYG00000004099	SMG5	97	62.537	ENSNBRG00000004332	smg5	98	64.700	Neolamprologus_brichardi
ENSTSYG00000004099	SMG5	100	96.952	ENSNLEG00000012439	SMG5	100	96.952	Nomascus_leucogenys
ENSTSYG00000004099	SMG5	100	87.819	ENSMEUG00000012834	SMG5	100	86.935	Notamacropus_eugenii
ENSTSYG00000004099	SMG5	100	93.314	ENSOPRG00000009152	SMG5	100	93.904	Ochotona_princeps
ENSTSYG00000004099	SMG5	100	94.100	ENSODEG00000012237	SMG5	100	95.084	Octodon_degus
ENSTSYG00000004099	SMG5	98	94.562	ENSOCUG00000012886	SMG5	100	95.670	Oryctolagus_cuniculus
ENSTSYG00000004099	SMG5	89	40.351	ENSOCUG00000023338	-	99	40.022	Oryctolagus_cuniculus
ENSTSYG00000004099	SMG5	99	60.467	ENSORLG00000016239	smg5	99	61.239	Oryzias_latipes
ENSTSYG00000004099	SMG5	99	64.070	ENSORLG00020013127	smg5	99	65.756	Oryzias_latipes_hni
ENSTSYG00000004099	SMG5	99	63.981	ENSORLG00015019014	smg5	99	65.661	Oryzias_latipes_hsok
ENSTSYG00000004099	SMG5	82	58.906	ENSOMEG00000021330	smg5	92	60.171	Oryzias_melastigma
ENSTSYG00000004099	SMG5	100	93.904	ENSOGAG00000004966	SMG5	100	94.985	Otolemur_garnettii
ENSTSYG00000004099	SMG5	99	44.098	ENSOARG00000011963	-	99	43.902	Ovis_aries
ENSTSYG00000004099	SMG5	100	93.904	ENSOARG00000005778	SMG5	100	94.887	Ovis_aries
ENSTSYG00000004099	SMG5	100	96.853	ENSPPAG00000011996	SMG5	100	96.853	Pan_paniscus
ENSTSYG00000004099	SMG5	98	93.656	ENSPPRG00000011901	SMG5	100	93.656	Panthera_pardus
ENSTSYG00000004099	SMG5	99	85.487	ENSPTIG00000007892	SMG5	98	86.148	Panthera_tigris_altaica
ENSTSYG00000004099	SMG5	100	97.050	ENSPTRG00000049282	-	100	97.050	Pan_troglodytes
ENSTSYG00000004099	SMG5	100	97.050	ENSPTRG00000023925	SMG5	100	97.050	Pan_troglodytes
ENSTSYG00000004099	SMG5	100	97.247	ENSPANG00000011201	SMG5	100	97.247	Papio_anubis
ENSTSYG00000004099	SMG5	99	66.014	ENSPKIG00000009402	smg5	99	66.406	Paramormyrops_kingsleyae
ENSTSYG00000004099	SMG5	98	80.099	ENSPSIG00000015198	SMG5	100	79.980	Pelodiscus_sinensis
ENSTSYG00000004099	SMG5	99	60.313	ENSPMGG00000010465	smg5	99	60.258	Periophthalmus_magnuspinnatus
ENSTSYG00000004099	SMG5	100	91.855	ENSPEMG00000001819	Smg5	100	91.658	Peromyscus_maniculatus_bairdii
ENSTSYG00000004099	SMG5	56	45.979	ENSPEMG00000010022	-	95	44.597	Peromyscus_maniculatus_bairdii
ENSTSYG00000004099	SMG5	99	49.087	ENSPMAG00000000410	smg5	100	49.810	Petromyzon_marinus
ENSTSYG00000004099	SMG5	100	89.096	ENSPCIG00000018938	SMG5	100	89.489	Phascolarctos_cinereus
ENSTSYG00000004099	SMG5	99	65.739	ENSPMEG00000014105	smg5	99	65.996	Poecilia_mexicana
ENSTSYG00000004099	SMG5	50	59.851	ENSPREG00000017713	smg5	99	62.007	Poecilia_reticulata
ENSTSYG00000004099	SMG5	100	97.148	ENSPPYG00000000723	SMG5	100	97.148	Pongo_abelii
ENSTSYG00000004099	SMG5	75	97.790	ENSPCAG00000008412	SMG5	81	97.790	Procavia_capensis
ENSTSYG00000004099	SMG5	100	96.952	ENSPCOG00000004741	SMG5	100	96.952	Propithecus_coquereli
ENSTSYG00000004099	SMG5	100	85.939	ENSPVAG00000016748	SMG5	100	85.939	Pteropus_vampyrus
ENSTSYG00000004099	SMG5	99	59.649	ENSPNYG00000013397	smg5	99	61.681	Pundamilia_nyererei
ENSTSYG00000004099	SMG5	99	62.602	ENSPNAG00000028363	smg5	99	62.922	Pygocentrus_nattereri
ENSTSYG00000004099	SMG5	100	91.757	ENSRNOG00000019590	Smg5	100	91.168	Rattus_norvegicus
ENSTSYG00000004099	SMG5	100	96.952	ENSRBIG00000027428	SMG5	100	96.952	Rhinopithecus_bieti
ENSTSYG00000004099	SMG5	100	96.853	ENSRROG00000030035	SMG5	100	96.853	Rhinopithecus_roxellana
ENSTSYG00000004099	SMG5	100	96.559	ENSSBOG00000033339	SMG5	100	96.559	Saimiri_boliviensis_boliviensis
ENSTSYG00000004099	SMG5	98	88.500	ENSSHAG00000014163	SMG5	100	88.900	Sarcophilus_harrisii
ENSTSYG00000004099	SMG5	78	42.998	ENSSHAG00000009572	-	80	42.998	Sarcophilus_harrisii
ENSTSYG00000004099	SMG5	88	40.157	ENSSHAG00000000561	-	87	40.157	Sarcophilus_harrisii
ENSTSYG00000004099	SMG5	64	39.766	ENSSHAG00000000935	-	96	40.854	Sarcophilus_harrisii
ENSTSYG00000004099	SMG5	99	65.209	ENSSFOG00015024175	smg5	99	65.823	Scleropages_formosus
ENSTSYG00000004099	SMG5	99	60.657	ENSSMAG00000013059	smg5	99	61.854	Scophthalmus_maximus
ENSTSYG00000004099	SMG5	99	60.371	ENSSDUG00000007122	smg5	99	61.770	Seriola_dumerili
ENSTSYG00000004099	SMG5	99	60.585	ENSSLDG00000011418	smg5	99	62.078	Seriola_lalandi_dorsalis
ENSTSYG00000004099	SMG5	90	80.937	ENSSARG00000012484	SMG5	100	80.937	Sorex_araneus
ENSTSYG00000004099	SMG5	94	77.429	ENSSPUG00000002260	SMG5	100	76.697	Sphenodon_punctatus
ENSTSYG00000004099	SMG5	93	74.382	ENSSPAG00000014266	smg5	98	65.664	Stegastes_partitus
ENSTSYG00000004099	SMG5	100	96.559	ENSSSCG00000006490	-	100	96.559	Sus_scrofa
ENSTSYG00000004099	SMG5	99	73.327	ENSSSCG00000039308	-	100	73.524	Sus_scrofa
ENSTSYG00000004099	SMG5	99	80.040	ENSTGUG00000003748	-	100	80.195	Taeniopygia_guttata
ENSTSYG00000004099	SMG5	99	63.584	ENSTRUG00000012580	smg5	99	64.451	Takifugu_rubripes
ENSTSYG00000004099	SMG5	99	65.053	ENSTNIG00000010303	smg5	99	64.403	Tetraodon_nigroviridis
ENSTSYG00000004099	SMG5	60	99.507	ENSTBEG00000002777	SMG5	60	99.507	Tupaia_belangeri
ENSTSYG00000004099	SMG5	100	91.052	ENSTTRG00000001401	SMG5	100	91.052	Tursiops_truncatus
ENSTSYG00000004099	SMG5	100	93.314	ENSUAMG00000013721	SMG5	100	93.314	Ursus_americanus
ENSTSYG00000004099	SMG5	98	88.554	ENSUMAG00000018041	SMG5	97	88.554	Ursus_maritimus
ENSTSYG00000004099	SMG5	98	86.089	ENSVPAG00000009446	SMG5	99	86.391	Vicugna_pacos
ENSTSYG00000004099	SMG5	100	94.494	ENSVVUG00000005887	SMG5	100	94.494	Vulpes_vulpes
ENSTSYG00000004099	SMG5	77	65.869	ENSXETG00000033791	SMG5	99	65.491	Xenopus_tropicalis
ENSTSYG00000004099	SMG5	60	76.552	ENSXCOG00000004379	smg5	96	68.681	Xiphophorus_couchianus
ENSTSYG00000004099	SMG5	99	65.537	ENSXMAG00000013499	smg5	99	65.700	Xiphophorus_maculatus