EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000004192 (Gene tree)
Gene ID: 103275691
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Plus strand
Length: 49068 bases
Position: chrKE949956.1:224851-273918
Accession: 103275691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000023448	GUCT	PF08152.12	6.8e-27	1	1
ENSTSYP00000014954	GUCT	PF08152.12	8.7e-27	1	1
ENSTSYP00000003845	GUCT	PF08152.12	1.5e-26	1	1
ENSTSYP00000014954	ResIII	PF04851.15	2.3e-10	1	1
ENSTSYP00000003845	ResIII	PF04851.15	2.8e-10	1	1
ENSTSYP00000014954	DEAD	PF00270.29	1.8e-47	1	1
ENSTSYP00000003845	DEAD	PF00270.29	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000034657	DDX50-203	1134	-	ENSTSYP00000023448	377 (aa)	-	UPI000C2F6DA8
ENSTSYT00000038907	DDX50-202	2145	-	ENSTSYP00000014954	715 (aa)	-	UPI000C2F7728
ENSTSYT00000004197	DDX50-201	2556	XM_008073089	ENSTSYP00000003845	737 (aa)	XP_008071280	A0A1U7UM58

Gene Model

Click here to download ENSTSYG00000004192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000004192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000004192	DDX50	50	31.300	ENSTSYG00000029157	-	60	32.861
ENSTSYG00000004192	DDX50	50	31.915	ENSTSYG00000003895	DDX3X	51	32.447
ENSTSYG00000004192	DDX50	51	32.533	ENSTSYG00000004557	EIF4A1	88	32.533
ENSTSYG00000004192	DDX50	51	34.417	ENSTSYG00000001303	DDX17	77	33.846
ENSTSYG00000004192	DDX50	99	57.713	ENSTSYG00000011231	DDX21	76	65.372
ENSTSYG00000004192	DDX50	57	33.333	ENSTSYG00000030362	DDX27	52	33.175
ENSTSYG00000004192	DDX50	53	33.249	ENSTSYG00000002978	DDX47	70	35.312
ENSTSYG00000004192	DDX50	51	34.771	ENSTSYG00000002540	DDX18	53	34.771
ENSTSYG00000004192	DDX50	50	33.243	ENSTSYG00000012149	DDX5	61	33.518
ENSTSYG00000004192	DDX50	50	35.294	ENSTSYG00000003652	DDX43	54	35.014
ENSTSYG00000004192	DDX50	50	30.220	ENSTSYG00000026313	DDX6	71	30.220
ENSTSYG00000004192	DDX50	51	32.888	ENSTSYG00000008738	EIF4A3	86	32.888
ENSTSYG00000004192	DDX50	50	33.151	ENSTSYG00000033318	DDX41	58	33.151
ENSTSYG00000004192	DDX50	51	32.075	ENSTSYG00000013050	EIF4A2	90	31.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000004192	DDX50	100	98.372	ENSG00000107625	DDX50	100	98.372	Homo_sapiens
ENSTSYG00000004192	DDX50	99	97.861	ENSAMEG00000017992	DDX50	100	96.748	Ailuropoda_melanoleuca
ENSTSYG00000004192	DDX50	92	78.437	ENSANAG00000017785	-	91	78.292	Aotus_nancymaae
ENSTSYG00000004192	DDX50	95	70.670	ENSANAG00000030991	-	87	77.926	Aotus_nancymaae
ENSTSYG00000004192	DDX50	99	98.396	ENSBTAG00000033413	DDX50	100	97.015	Bos_taurus
ENSTSYG00000004192	DDX50	100	98.507	ENSCJAG00000018844	DDX50	100	98.507	Callithrix_jacchus
ENSTSYG00000004192	DDX50	100	97.154	ENSCAFG00000013776	DDX50	100	97.154	Canis_familiaris
ENSTSYG00000004192	DDX50	100	97.154	ENSCAFG00020025977	DDX50	99	97.154	Canis_lupus_dingo
ENSTSYG00000004192	DDX50	100	96.608	ENSCHIG00000000285	DDX50	99	96.608	Capra_hircus
ENSTSYG00000004192	DDX50	91	76.261	ENSCAPG00000007230	-	87	78.615	Cavia_aperea
ENSTSYG00000004192	DDX50	99	97.326	ENSCPOG00000002131	-	92	95.870	Cavia_porcellus
ENSTSYG00000004192	DDX50	91	88.431	ENSCCAG00000030543	DDX50	100	88.431	Cebus_capucinus
ENSTSYG00000004192	DDX50	94	85.393	ENSCATG00000035153	-	89	89.655	Cercocebus_atys
ENSTSYG00000004192	DDX50	99	98.930	ENSCATG00000032463	DDX50	99	95.924	Cercocebus_atys
ENSTSYG00000004192	DDX50	99	70.933	ENSCATG00000039259	-	89	68.429	Cercocebus_atys
ENSTSYG00000004192	DDX50	98	86.721	ENSCLAG00000001553	-	79	88.065	Chinchilla_lanigera
ENSTSYG00000004192	DDX50	99	98.396	ENSCLAG00000012957	-	100	97.151	Chinchilla_lanigera
ENSTSYG00000004192	DDX50	99	77.540	ENSCLAG00000001938	-	91	71.363	Chinchilla_lanigera
ENSTSYG00000004192	DDX50	100	98.507	ENSCSAG00000007703	DDX50	100	98.507	Chlorocebus_sabaeus
ENSTSYG00000004192	DDX50	88	96.988	ENSCHOG00000000233	DDX50	97	95.223	Choloepus_hoffmanni
ENSTSYG00000004192	DDX50	99	78.342	ENSCANG00000018820	-	88	73.043	Colobus_angolensis_palliatus
ENSTSYG00000004192	DDX50	92	79.251	ENSCANG00000028077	-	91	69.400	Colobus_angolensis_palliatus
ENSTSYG00000004192	DDX50	99	95.187	ENSCANG00000036450	-	100	84.532	Colobus_angolensis_palliatus
ENSTSYG00000004192	DDX50	99	96.791	ENSCGRG00001020223	Ddx50	92	95.428	Cricetulus_griseus_chok1gshd
ENSTSYG00000004192	DDX50	92	95.556	ENSCGRG00000015884	Ddx50	92	95.428	Cricetulus_griseus_crigri
ENSTSYG00000004192	DDX50	88	90.741	ENSDNOG00000001675	DDX50	100	90.741	Dasypus_novemcinctus
ENSTSYG00000004192	DDX50	99	98.128	ENSDORG00000007310	Ddx50	100	96.608	Dipodomys_ordii
ENSTSYG00000004192	DDX50	99	97.059	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSTSYG00000004192	DDX50	100	97.015	ENSEASG00005015595	DDX50	99	97.015	Equus_asinus_asinus
ENSTSYG00000004192	DDX50	100	97.151	ENSECAG00000023044	DDX50	99	97.151	Equus_caballus
ENSTSYG00000004192	DDX50	94	96.317	ENSEEUG00000005782	DDX50	81	98.060	Erinaceus_europaeus
ENSTSYG00000004192	DDX50	100	97.561	ENSFCAG00000012678	DDX50	99	97.561	Felis_catus
ENSTSYG00000004192	DDX50	92	89.823	ENSFDAG00000016109	-	91	89.823	Fukomys_damarensis
ENSTSYG00000004192	DDX50	99	81.818	ENSGGOG00000041063	-	82	84.639	Gorilla_gorilla
ENSTSYG00000004192	DDX50	100	98.372	ENSGGOG00000010100	DDX50	100	98.670	Gorilla_gorilla
ENSTSYG00000004192	DDX50	99	69.786	ENSGGOG00000022568	-	90	79.193	Gorilla_gorilla
ENSTSYG00000004192	DDX50	99	97.326	ENSHGLG00000013466	DDX50	92	95.133	Heterocephalus_glaber_female
ENSTSYG00000004192	DDX50	99	97.326	ENSHGLG00100017191	DDX50	92	95.133	Heterocephalus_glaber_male
ENSTSYG00000004192	DDX50	82	86.702	ENSHGLG00100006568	-	92	86.702	Heterocephalus_glaber_male
ENSTSYG00000004192	DDX50	100	95.528	ENSSTOG00000021852	-	100	95.257	Ictidomys_tridecemlineatus
ENSTSYG00000004192	DDX50	99	96.524	ENSJJAG00000023928	-	92	94.690	Jaculus_jaculus
ENSTSYG00000004192	DDX50	99	78.307	ENSJJAG00000019626	-	91	73.985	Jaculus_jaculus
ENSTSYG00000004192	DDX50	100	97.015	ENSLAFG00000006186	DDX50	100	97.015	Loxodonta_africana
ENSTSYG00000004192	DDX50	100	98.507	ENSMFAG00000044067	DDX50	100	98.507	Macaca_fascicularis
ENSTSYG00000004192	DDX50	94	84.551	ENSMFAG00000045339	-	89	88.715	Macaca_fascicularis
ENSTSYG00000004192	DDX50	98	71.505	ENSMMUG00000045343	-	88	66.316	Macaca_mulatta
ENSTSYG00000004192	DDX50	100	98.507	ENSMMUG00000001006	DDX50	100	98.810	Macaca_mulatta
ENSTSYG00000004192	DDX50	94	85.393	ENSMNEG00000045530	-	89	89.969	Macaca_nemestrina
ENSTSYG00000004192	DDX50	92	73.988	ENSMNEG00000034754	-	89	73.231	Macaca_nemestrina
ENSTSYG00000004192	DDX50	92	91.740	ENSMNEG00000031664	DDX50	92	91.740	Macaca_nemestrina
ENSTSYG00000004192	DDX50	84	73.585	ENSMLEG00000041337	-	83	74.233	Mandrillus_leucophaeus
ENSTSYG00000004192	DDX50	100	96.608	ENSMLEG00000037313	DDX50	100	96.608	Mandrillus_leucophaeus
ENSTSYG00000004192	DDX50	99	78.552	ENSMLEG00000041988	-	89	87.597	Mandrillus_leucophaeus
ENSTSYG00000004192	DDX50	76	90.877	ENSMAUG00000000119	-	79	96.226	Mesocricetus_auratus
ENSTSYG00000004192	DDX50	56	94.189	ENSMAUG00000022192	Ddx50	100	94.189	Mesocricetus_auratus
ENSTSYG00000004192	DDX50	76	90.877	ENSMAUG00000011906	-	79	96.226	Mesocricetus_auratus
ENSTSYG00000004192	DDX50	99	97.861	ENSMICG00000017539	DDX50	100	90.529	Microcebus_murinus
ENSTSYG00000004192	DDX50	99	96.524	ENSMOCG00000001676	Ddx50	92	94.853	Microtus_ochrogaster
ENSTSYG00000004192	DDX50	92	80.059	ENSMODG00000010741	DDX50	92	80.466	Monodelphis_domestica
ENSTSYG00000004192	DDX50	99	97.059	MGP_CAROLIEiJ_G0015389	Ddx50	92	94.690	Mus_caroli
ENSTSYG00000004192	DDX50	99	97.326	ENSMUSG00000020076	Ddx50	92	94.985	Mus_musculus
ENSTSYG00000004192	DDX50	99	97.594	MGP_PahariEiJ_G0030805	Ddx50	92	95.133	Mus_pahari
ENSTSYG00000004192	DDX50	99	97.326	MGP_SPRETEiJ_G0016200	Ddx50	92	94.985	Mus_spretus
ENSTSYG00000004192	DDX50	88	96.759	ENSMPUG00000004589	DDX50	99	96.759	Mustela_putorius_furo
ENSTSYG00000004192	DDX50	92	95.723	ENSMLUG00000017590	DDX50	92	95.723	Myotis_lucifugus
ENSTSYG00000004192	DDX50	99	97.594	ENSNGAG00000004283	Ddx50	100	96.201	Nannospalax_galili
ENSTSYG00000004192	DDX50	94	75.000	ENSNLEG00000035506	-	88	77.882	Nomascus_leucogenys
ENSTSYG00000004192	DDX50	100	98.372	ENSNLEG00000011631	DDX50	100	98.372	Nomascus_leucogenys
ENSTSYG00000004192	DDX50	92	94.248	ENSOPRG00000001619	DDX50	92	94.985	Ochotona_princeps
ENSTSYG00000004192	DDX50	99	98.128	ENSODEG00000014597	-	100	96.065	Octodon_degus
ENSTSYG00000004192	DDX50	99	65.608	ENSOANG00000004776	DDX50	76	72.027	Ornithorhynchus_anatinus
ENSTSYG00000004192	DDX50	100	91.588	ENSOCUG00000002879	DDX50	95	95.575	Oryctolagus_cuniculus
ENSTSYG00000004192	DDX50	100	97.693	ENSOGAG00000001844	DDX50	100	97.693	Otolemur_garnettii
ENSTSYG00000004192	DDX50	100	96.472	ENSOARG00000005264	DDX50	99	96.472	Ovis_aries
ENSTSYG00000004192	DDX50	99	70.053	ENSPPAG00000026788	-	89	79.245	Pan_paniscus
ENSTSYG00000004192	DDX50	94	82.584	ENSPPAG00000033902	-	87	83.699	Pan_paniscus
ENSTSYG00000004192	DDX50	100	98.236	ENSPPAG00000040723	DDX50	100	98.236	Pan_paniscus
ENSTSYG00000004192	DDX50	100	97.561	ENSPPRG00000015826	DDX50	100	97.561	Panthera_pardus
ENSTSYG00000004192	DDX50	100	97.561	ENSPTIG00000008454	DDX50	100	97.561	Panthera_tigris_altaica
ENSTSYG00000004192	DDX50	99	70.053	ENSPTRG00000044913	-	99	71.579	Pan_troglodytes
ENSTSYG00000004192	DDX50	100	98.236	ENSPTRG00000002562	DDX50	100	98.236	Pan_troglodytes
ENSTSYG00000004192	DDX50	93	74.212	ENSPANG00000032548	-	89	73.846	Papio_anubis
ENSTSYG00000004192	DDX50	99	98.930	ENSPANG00000022143	-	92	90.855	Papio_anubis
ENSTSYG00000004192	DDX50	92	94.248	ENSPEMG00000020899	-	92	94.248	Peromyscus_maniculatus_bairdii
ENSTSYG00000004192	DDX50	98	76.099	ENSPCIG00000016036	DDX50	93	80.945	Phascolarctos_cinereus
ENSTSYG00000004192	DDX50	99	98.930	ENSPPYG00000002390	DDX50	100	98.661	Pongo_abelii
ENSTSYG00000004192	DDX50	84	83.117	ENSPCAG00000009692	DDX50	100	83.117	Procavia_capensis
ENSTSYG00000004192	DDX50	88	92.035	ENSPCOG00000012574	DDX50	99	92.035	Propithecus_coquereli
ENSTSYG00000004192	DDX50	86	95.592	ENSPVAG00000009519	DDX50	78	95.592	Pteropus_vampyrus
ENSTSYG00000004192	DDX50	99	97.326	ENSRNOG00000000396	Ddx50	98	97.326	Rattus_norvegicus
ENSTSYG00000004192	DDX50	87	96.890	ENSRBIG00000042841	-	98	98.282	Rhinopithecus_bieti
ENSTSYG00000004192	DDX50	99	74.531	ENSRBIG00000039673	-	90	66.960	Rhinopithecus_bieti
ENSTSYG00000004192	DDX50	99	74.933	ENSRBIG00000036573	-	92	68.593	Rhinopithecus_bieti
ENSTSYG00000004192	DDX50	99	70.241	ENSRROG00000031940	-	87	75.077	Rhinopithecus_roxellana
ENSTSYG00000004192	DDX50	99	73.529	ENSRROG00000022853	-	91	65.533	Rhinopithecus_roxellana
ENSTSYG00000004192	DDX50	100	98.236	ENSRROG00000032158	DDX50	100	98.366	Rhinopithecus_roxellana
ENSTSYG00000004192	DDX50	100	87.653	ENSSBOG00000014441	DDX50	100	87.653	Saimiri_boliviensis_boliviensis
ENSTSYG00000004192	DDX50	83	86.262	ENSSHAG00000005690	DDX50	91	80.909	Sarcophilus_harrisii
ENSTSYG00000004192	DDX50	82	67.780	ENSSHAG00000005334	-	80	67.657	Sarcophilus_harrisii
ENSTSYG00000004192	DDX50	100	79.783	ENSSARG00000013553	DDX50	88	87.597	Sorex_araneus
ENSTSYG00000004192	DDX50	100	95.794	ENSSSCG00000010246	DDX50	92	95.870	Sus_scrofa
ENSTSYG00000004192	DDX50	96	75.246	ENSTBEG00000001085	DDX50	92	74.926	Tupaia_belangeri
ENSTSYG00000004192	DDX50	99	95.989	ENSTTRG00000012408	DDX50	99	90.366	Tursiops_truncatus
ENSTSYG00000004192	DDX50	100	97.019	ENSUAMG00000010976	DDX50	99	98.123	Ursus_americanus
ENSTSYG00000004192	DDX50	100	97.019	ENSUMAG00000007726	DDX50	99	97.019	Ursus_maritimus
ENSTSYG00000004192	DDX50	99	98.128	ENSVPAG00000000626	DDX50	100	96.472	Vicugna_pacos
ENSTSYG00000004192	DDX50	99	98.128	ENSVVUG00000020366	DDX50	98	98.128	Vulpes_vulpes