EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000004204 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Y-box-binding protein 3
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 24505 bases
Position: chrKE943462.1:372755-397259
Accession: 103267492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000003841	CSD	PF00313.22	2e-26	1	1
ENSTSYP00000033449	CSD	PF00313.22	3.7e-26	1	1
ENSTSYP00000025715	CSD	PF00313.22	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000004193	-	984	XM_008065080	ENSTSYP00000003841	327 (aa)	-	UPI000C2F32D5
ENSTSYT00000038985	-	774	-	ENSTSYP00000033449	257 (aa)	-	UPI000C2F4EBC
ENSTSYT00000027199	-	1020	-	ENSTSYP00000025715	339 (aa)	-	UPI000C2F3DCA

Gene Model

Click here to download ENSTSYG00000004204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000004204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000004204	-	85	86.239	ENSTSYG00000035821	-	70	95.455
ENSTSYG00000004204	-	82	51.493	ENSTSYG00000027684	-	58	64.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000004204	-	88	94.774	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSTSYG00000004204	-	96	82.336	ENSAMEG00000009393	YBX3	81	94.077	Ailuropoda_melanoleuca
ENSTSYG00000004204	-	87	65.734	ENSAPLG00000003147	YBX3	100	65.734	Anas_platyrhynchos
ENSTSYG00000004204	-	88	94.774	ENSANAG00000024492	-	91	94.774	Aotus_nancymaae
ENSTSYG00000004204	-	85	67.857	ENSANAG00000033366	-	68	82.308	Aotus_nancymaae
ENSTSYG00000004204	-	88	91.638	ENSBTAG00000009663	YBX3	76	89.199	Bos_taurus
ENSTSYG00000004204	-	95	69.388	ENSCJAG00000033824	-	80	87.838	Callithrix_jacchus
ENSTSYG00000004204	-	88	94.774	ENSCJAG00000021660	-	78	94.774	Callithrix_jacchus
ENSTSYG00000004204	-	89	93.103	ENSCAFG00000013401	YBX3	100	93.578	Canis_familiaris
ENSTSYG00000004204	-	88	91.289	ENSCAFG00020006412	YBX3	76	90.941	Canis_lupus_dingo
ENSTSYG00000004204	-	88	91.986	ENSCHIG00000010863	YBX3	80	91.289	Capra_hircus
ENSTSYG00000004204	-	90	88.095	ENSCAPG00000015039	YBX3	95	88.095	Cavia_aperea
ENSTSYG00000004204	-	88	88.153	ENSCPOG00000011329	YBX3	84	88.153	Cavia_porcellus
ENSTSYG00000004204	-	88	94.425	ENSCCAG00000016469	YBX3	77	94.425	Cebus_capucinus
ENSTSYG00000004204	-	88	94.077	ENSCATG00000034411	YBX3	77	94.077	Cercocebus_atys
ENSTSYG00000004204	-	93	87.500	ENSCLAG00000016030	YBX3	98	87.500	Chinchilla_lanigera
ENSTSYG00000004204	-	88	94.425	ENSCSAG00000008744	YBX3	77	94.425	Chlorocebus_sabaeus
ENSTSYG00000004204	-	88	79.514	ENSCPBG00000014147	YBX3	80	78.819	Chrysemys_picta_bellii
ENSTSYG00000004204	-	88	94.425	ENSCANG00000036801	YBX3	91	94.425	Colobus_angolensis_palliatus
ENSTSYG00000004204	-	96	88.254	ENSCGRG00001016148	Ybx3	79	93.031	Cricetulus_griseus_chok1gshd
ENSTSYG00000004204	-	90	92.617	ENSCGRG00000004563	Ybx3	100	91.275	Cricetulus_griseus_crigri
ENSTSYG00000004204	-	94	91.503	ENSDORG00000009103	Ybx3	85	91.118	Dipodomys_ordii
ENSTSYG00000004204	-	87	85.614	ENSETEG00000002557	YBX3	99	84.859	Echinops_telfairi
ENSTSYG00000004204	-	88	88.502	ENSEASG00005014726	YBX3	76	87.108	Equus_asinus_asinus
ENSTSYG00000004204	-	88	92.334	ENSECAG00000013777	YBX3	77	93.728	Equus_caballus
ENSTSYG00000004204	-	87	94.014	ENSEEUG00000010415	YBX3	100	94.014	Erinaceus_europaeus
ENSTSYG00000004204	-	88	95.470	ENSFCAG00000027748	YBX3	77	95.470	Felis_catus
ENSTSYG00000004204	-	84	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSTSYG00000004204	-	91	84.950	ENSFDAG00000021192	YBX3	96	83.946	Fukomys_damarensis
ENSTSYG00000004204	-	85	82.110	ENSGALG00000031890	YBX3	69	98.864	Gallus_gallus
ENSTSYG00000004204	-	88	78.472	ENSGAGG00000017780	YBX3	80	77.778	Gopherus_agassizii
ENSTSYG00000004204	-	88	94.774	ENSGGOG00000001352	YBX3	77	94.774	Gorilla_gorilla
ENSTSYG00000004204	-	88	76.632	ENSHGLG00000014798	-	85	77.663	Heterocephalus_glaber_female
ENSTSYG00000004204	-	81	80.524	ENSHGLG00000015495	-	78	77.528	Heterocephalus_glaber_female
ENSTSYG00000004204	-	88	89.823	ENSHGLG00100003589	YBX3	90	89.823	Heterocephalus_glaber_male
ENSTSYG00000004204	-	88	90.941	ENSSTOG00000032577	-	81	89.547	Ictidomys_tridecemlineatus
ENSTSYG00000004204	-	91	88.176	ENSSTOG00000002108	-	94	86.275	Ictidomys_tridecemlineatus
ENSTSYG00000004204	-	88	68.166	ENSJJAG00000014239	Ybx3	92	83.750	Jaculus_jaculus
ENSTSYG00000004204	-	88	94.774	ENSLAFG00000017247	YBX3	85	88.153	Loxodonta_africana
ENSTSYG00000004204	-	88	94.425	ENSMFAG00000039369	YBX3	77	94.425	Macaca_fascicularis
ENSTSYG00000004204	-	88	94.425	ENSMMUG00000022469	YBX3	88	94.425	Macaca_mulatta
ENSTSYG00000004204	-	88	94.425	ENSMNEG00000045109	YBX3	77	94.425	Macaca_nemestrina
ENSTSYG00000004204	-	96	91.111	ENSMLEG00000033618	YBX3	96	85.632	Mandrillus_leucophaeus
ENSTSYG00000004204	-	82	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSTSYG00000004204	-	96	87.937	ENSMAUG00000012185	Ybx3	89	92.683	Mesocricetus_auratus
ENSTSYG00000004204	-	85	80.275	ENSMICG00000031459	-	76	79.358	Microcebus_murinus
ENSTSYG00000004204	-	88	95.819	ENSMICG00000038002	-	77	94.774	Microcebus_murinus
ENSTSYG00000004204	-	96	88.254	ENSMOCG00000016291	Ybx3	93	93.031	Microtus_ochrogaster
ENSTSYG00000004204	-	91	81.126	ENSMODG00000018248	YBX3	95	81.788	Monodelphis_domestica
ENSTSYG00000004204	-	96	88.254	MGP_CAROLIEiJ_G0028947	Ybx3	79	93.031	Mus_caroli
ENSTSYG00000004204	-	96	88.254	ENSMUSG00000030189	Ybx3	79	93.031	Mus_musculus
ENSTSYG00000004204	-	96	88.889	MGP_PahariEiJ_G0022709	Ybx3	79	93.728	Mus_pahari
ENSTSYG00000004204	-	96	88.571	MGP_SPRETEiJ_G0029994	Ybx3	79	93.380	Mus_spretus
ENSTSYG00000004204	-	85	93.750	ENSMPUG00000011810	YBX3	78	77.966	Mustela_putorius_furo
ENSTSYG00000004204	-	81	93.680	ENSMLUG00000007476	YBX3	100	91.822	Myotis_lucifugus
ENSTSYG00000004204	-	87	87.719	ENSNGAG00000000710	Ybx3	88	84.722	Nannospalax_galili
ENSTSYG00000004204	-	88	90.592	ENSNLEG00000034844	YBX3	81	90.592	Nomascus_leucogenys
ENSTSYG00000004204	-	53	78.035	ENSMEUG00000002507	-	81	78.035	Notamacropus_eugenii
ENSTSYG00000004204	-	88	84.321	ENSODEG00000017957	YBX3	84	84.321	Octodon_degus
ENSTSYG00000004204	-	88	89.547	ENSOCUG00000001889	YBX3	83	89.199	Oryctolagus_cuniculus
ENSTSYG00000004204	-	82	98.000	ENSOGAG00000013245	YBX3	78	91.156	Otolemur_garnettii
ENSTSYG00000004204	-	88	78.201	ENSOARG00000020919	YBX3	97	82.353	Ovis_aries
ENSTSYG00000004204	-	88	94.774	ENSPPAG00000039068	YBX3	80	94.774	Pan_paniscus
ENSTSYG00000004204	-	88	95.819	ENSPPRG00000005859	YBX3	77	95.819	Panthera_pardus
ENSTSYG00000004204	-	87	95.088	ENSPTIG00000005322	YBX3	83	93.898	Panthera_tigris_altaica
ENSTSYG00000004204	-	88	94.774	ENSPTRG00000004681	YBX3	77	94.774	Pan_troglodytes
ENSTSYG00000004204	-	88	94.077	ENSPANG00000010280	YBX3	77	94.077	Papio_anubis
ENSTSYG00000004204	-	84	84.722	ENSPSIG00000009247	YBX3	92	100.000	Pelodiscus_sinensis
ENSTSYG00000004204	-	96	87.937	ENSPEMG00000012132	-	90	93.380	Peromyscus_maniculatus_bairdii
ENSTSYG00000004204	-	95	85.306	ENSPEMG00000010391	-	82	91.743	Peromyscus_maniculatus_bairdii
ENSTSYG00000004204	-	79	81.538	ENSPCIG00000029949	YBX3	100	79.615	Phascolarctos_cinereus
ENSTSYG00000004204	-	88	94.425	ENSPPYG00000004279	YBX3	77	94.425	Pongo_abelii
ENSTSYG00000004204	-	63	94.686	ENSPCAG00000001397	YBX3	70	94.554	Procavia_capensis
ENSTSYG00000004204	-	54	92.000	ENSPCOG00000011663	YBX3	67	92.000	Propithecus_coquereli
ENSTSYG00000004204	-	88	79.443	ENSPVAG00000006740	YBX3	54	97.030	Pteropus_vampyrus
ENSTSYG00000004204	-	96	88.571	ENSRNOG00000005480	Ybx3	79	93.380	Rattus_norvegicus
ENSTSYG00000004204	-	88	94.425	ENSRBIG00000039208	YBX3	77	94.425	Rhinopithecus_bieti
ENSTSYG00000004204	-	88	94.425	ENSRROG00000029638	YBX3	77	94.425	Rhinopithecus_roxellana
ENSTSYG00000004204	-	100	93.902	ENSSBOG00000030573	YBX3	86	93.902	Saimiri_boliviensis_boliviensis
ENSTSYG00000004204	-	77	98.837	ENSSHAG00000003262	YBX3	98	80.412	Sarcophilus_harrisii
ENSTSYG00000004204	-	55	87.943	ENSSPUG00000009911	-	63	88.722	Sphenodon_punctatus
ENSTSYG00000004204	-	88	96.167	ENSSSCG00000000633	YBX3	75	96.167	Sus_scrofa
ENSTSYG00000004204	-	83	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSTSYG00000004204	-	88	96.516	ENSTBEG00000012570	YBX3	79	96.516	Tupaia_belangeri
ENSTSYG00000004204	-	80	86.090	ENSTTRG00000008045	YBX3	100	86.090	Tursiops_truncatus
ENSTSYG00000004204	-	85	90.288	ENSUAMG00000016662	YBX3	100	90.647	Ursus_americanus
ENSTSYG00000004204	-	87	93.684	ENSUMAG00000016118	YBX3	97	93.919	Ursus_maritimus
ENSTSYG00000004204	-	68	100.000	ENSVPAG00000000876	YBX3	100	71.831	Vicugna_pacos
ENSTSYG00000004204	-	85	91.007	ENSVVUG00000004956	YBX3	100	90.647	Vulpes_vulpes
ENSTSYG00000004204	-	84	71.818	ENSXETG00000016239	ybx3	88	67.580	Xenopus_tropicalis