EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTSYG00000004355 (Gene tree)
Gene ID: 103266157
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Carlito_syrichta
Status: putative
Strand: Minus strand
Length: 9726 bases
Position: chrKE942503.1:289670-299395
Accession: 103266157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTSYP00000003986	RRM_1	PF00076.22	1.1e-57	1	4
ENSTSYP00000003986	RRM_1	PF00076.22	1.1e-57	2	4
ENSTSYP00000003986	RRM_1	PF00076.22	1.1e-57	3	4
ENSTSYP00000003986	RRM_1	PF00076.22	1.1e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTSYT00000004354	-	2796	XM_008063796	ENSTSYP00000003986	714 (aa)	XP_008061987	A0A1U7U9Q3

Gene Model

Click here to download ENSTSYG00000004355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTSYG00000004355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTSYG00000004355	-	90	74.339	ENSTSYG00000036886	-	91	81.069
ENSTSYG00000004355	-	95	99.132	ENSTSYG00000029779	-	99	97.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTSYG00000004355	-	92	89.771	ENSG00000115053	NCL	100	90.203	Homo_sapiens
ENSTSYG00000004355	-	53	96.834	ENSAMEG00000016289	NCL	92	87.443	Ailuropoda_melanoleuca
ENSTSYG00000004355	-	100	69.608	ENSANAG00000024378	-	85	81.818	Aotus_nancymaae
ENSTSYG00000004355	-	92	89.939	ENSANAG00000035814	-	92	89.482	Aotus_nancymaae
ENSTSYG00000004355	-	68	90.417	ENSBTAG00000026909	-	85	90.795	Bos_taurus
ENSTSYG00000004355	-	68	89.754	ENSBTAG00000050728	-	84	89.754	Bos_taurus
ENSTSYG00000004355	-	90	92.157	ENSBTAG00000051320	-	78	90.141	Bos_taurus
ENSTSYG00000004355	-	94	84.831	ENSBTAG00000016174	NCL	92	86.377	Bos_taurus
ENSTSYG00000004355	-	53	97.625	ENSCJAG00000013538	NCL	92	86.061	Callithrix_jacchus
ENSTSYG00000004355	-	92	87.405	ENSCAFG00000011037	NCL	92	87.557	Canis_familiaris
ENSTSYG00000004355	-	84	86.799	ENSCAFG00020023145	NCL	89	86.964	Canis_lupus_dingo
ENSTSYG00000004355	-	74	96.018	ENSCHIG00000021052	-	81	95.595	Capra_hircus
ENSTSYG00000004355	-	92	62.290	ENSCHIG00000012143	-	92	71.644	Capra_hircus
ENSTSYG00000004355	-	92	79.274	ENSCHIG00000026149	-	93	78.971	Capra_hircus
ENSTSYG00000004355	-	85	86.016	ENSCHIG00000010894	-	91	86.179	Capra_hircus
ENSTSYG00000004355	-	91	78.101	ENSCAPG00000009405	NCL	91	79.020	Cavia_aperea
ENSTSYG00000004355	-	92	81.487	ENSCPOG00000001034	NCL	92	82.246	Cavia_porcellus
ENSTSYG00000004355	-	56	88.945	ENSCCAG00000000551	-	85	89.055	Cebus_capucinus
ENSTSYG00000004355	-	92	88.567	ENSCCAG00000021040	-	92	89.482	Cebus_capucinus
ENSTSYG00000004355	-	92	89.466	ENSCATG00000037033	NCL	92	89.618	Cercocebus_atys
ENSTSYG00000004355	-	92	82.246	ENSCLAG00000013080	NCL	92	83.156	Chinchilla_lanigera
ENSTSYG00000004355	-	61	97.500	ENSCSAG00000006660	NCL	95	97.500	Chlorocebus_sabaeus
ENSTSYG00000004355	-	61	74.658	ENSCHOG00000012860	NCL	78	80.159	Choloepus_hoffmanni
ENSTSYG00000004355	-	57	100.000	ENSCANG00000036756	NCL	94	100.000	Colobus_angolensis_palliatus
ENSTSYG00000004355	-	92	80.728	ENSCGRG00001024315	-	91	81.364	Cricetulus_griseus_chok1gshd
ENSTSYG00000004355	-	85	81.169	ENSCGRG00000017894	-	88	81.169	Cricetulus_griseus_crigri
ENSTSYG00000004355	-	100	75.661	ENSDNOG00000046347	-	99	76.078	Dasypus_novemcinctus
ENSTSYG00000004355	-	92	84.871	ENSDNOG00000010783	-	92	85.477	Dasypus_novemcinctus
ENSTSYG00000004355	-	51	72.951	ENSDORG00000023596	-	92	67.791	Dipodomys_ordii
ENSTSYG00000004355	-	92	78.779	ENSDORG00000012513	-	91	78.626	Dipodomys_ordii
ENSTSYG00000004355	-	72	66.396	ENSETEG00000008139	-	89	66.216	Echinops_telfairi
ENSTSYG00000004355	-	62	61.625	ENSETEG00000008553	-	80	64.474	Echinops_telfairi
ENSTSYG00000004355	-	53	89.920	ENSETEG00000014756	-	86	89.974	Echinops_telfairi
ENSTSYG00000004355	-	53	90.526	ENSETEG00000018937	-	85	80.229	Echinops_telfairi
ENSTSYG00000004355	-	89	85.162	ENSEASG00005008488	NCL	84	96.306	Equus_asinus_asinus
ENSTSYG00000004355	-	92	85.822	ENSECAG00000021868	NCL	92	85.973	Equus_caballus
ENSTSYG00000004355	-	85	79.180	ENSEEUG00000005913	NCL	85	80.328	Erinaceus_europaeus
ENSTSYG00000004355	-	92	88.333	ENSFCAG00000027622	NCL	92	88.333	Felis_catus
ENSTSYG00000004355	-	91	84.793	ENSFDAG00000014291	NCL	92	84.793	Fukomys_damarensis
ENSTSYG00000004355	-	92	90.076	ENSGGOG00000004300	NCL	92	89.008	Gorilla_gorilla
ENSTSYG00000004355	-	56	82.727	ENSHGLG00000005133	-	93	75.088	Heterocephalus_glaber_female
ENSTSYG00000004355	-	91	75.994	ENSHGLG00000011069	-	92	72.561	Heterocephalus_glaber_female
ENSTSYG00000004355	-	92	85.236	ENSHGLG00000002031	-	92	85.236	Heterocephalus_glaber_female
ENSTSYG00000004355	-	57	77.941	ENSHGLG00100000745	-	61	78.049	Heterocephalus_glaber_male
ENSTSYG00000004355	-	92	83.866	ENSHGLG00100014537	-	92	83.866	Heterocephalus_glaber_male
ENSTSYG00000004355	-	53	81.794	ENSJJAG00000016165	Ncl	91	76.888	Jaculus_jaculus
ENSTSYG00000004355	-	92	89.618	ENSMFAG00000040385	NCL	92	89.771	Macaca_fascicularis
ENSTSYG00000004355	-	92	89.618	ENSMMUG00000018094	NCL	92	89.771	Macaca_mulatta
ENSTSYG00000004355	-	62	93.891	ENSMNEG00000023839	NCL	87	90.283	Macaca_nemestrina
ENSTSYG00000004355	-	92	89.313	ENSMLEG00000028935	NCL	92	89.466	Mandrillus_leucophaeus
ENSTSYG00000004355	-	92	72.409	ENSMICG00000029975	-	86	81.560	Microcebus_murinus
ENSTSYG00000004355	-	92	89.008	ENSMICG00000002538	-	92	88.244	Microcebus_murinus
ENSTSYG00000004355	-	92	76.818	MGP_CAROLIEiJ_G0014362	Ncl	92	77.156	Mus_caroli
ENSTSYG00000004355	-	92	76.061	ENSMUSG00000026234	Ncl	92	77.005	Mus_musculus
ENSTSYG00000004355	-	92	77.341	MGP_PahariEiJ_G0027599	Ncl	92	79.154	Mus_pahari
ENSTSYG00000004355	-	92	76.702	MGP_SPRETEiJ_G0015164	Ncl	92	78.215	Mus_spretus
ENSTSYG00000004355	-	92	86.039	ENSMLUG00000014547	NCL	92	86.343	Myotis_lucifugus
ENSTSYG00000004355	-	53	72.800	ENSNGAG00000006188	-	52	73.087	Nannospalax_galili
ENSTSYG00000004355	-	92	80.752	ENSNGAG00000002454	-	91	80.752	Nannospalax_galili
ENSTSYG00000004355	-	86	75.818	ENSNLEG00000014107	-	85	76.321	Nomascus_leucogenys
ENSTSYG00000004355	-	91	65.658	ENSODEG00000007803	-	90	64.769	Octodon_degus
ENSTSYG00000004355	-	91	80.183	ENSODEG00000003281	-	91	80.822	Octodon_degus
ENSTSYG00000004355	-	91	72.588	ENSODEG00000002748	-	91	75.994	Octodon_degus
ENSTSYG00000004355	-	62	78.507	ENSODEG00000002441	-	59	83.905	Octodon_degus
ENSTSYG00000004355	-	92	78.963	ENSOCUG00000004312	NCL	91	78.354	Oryctolagus_cuniculus
ENSTSYG00000004355	-	70	88.383	ENSOARG00000013710	-	94	76.260	Ovis_aries
ENSTSYG00000004355	-	54	79.275	ENSOARG00000004072	-	92	68.627	Ovis_aries
ENSTSYG00000004355	-	91	78.852	ENSOARG00000020709	-	92	81.873	Ovis_aries
ENSTSYG00000004355	-	76	86.458	ENSOARG00000013270	-	100	90.110	Ovis_aries
ENSTSYG00000004355	-	92	89.771	ENSPPAG00000011619	NCL	92	89.160	Pan_paniscus
ENSTSYG00000004355	-	92	87.709	ENSPPRG00000012603	NCL	92	87.860	Panthera_pardus
ENSTSYG00000004355	-	91	87.443	ENSPTIG00000010393	NCL	91	87.596	Panthera_tigris_altaica
ENSTSYG00000004355	-	92	89.634	ENSPTRG00000013025	NCL	92	89.024	Pan_troglodytes
ENSTSYG00000004355	-	92	89.618	ENSPANG00000010292	NCL	92	89.771	Papio_anubis
ENSTSYG00000004355	-	92	82.549	ENSPPYG00000013265	NCL	92	82.451	Pongo_abelii
ENSTSYG00000004355	-	91	84.663	ENSPCOG00000004160	-	86	89.947	Propithecus_coquereli
ENSTSYG00000004355	-	92	89.939	ENSPCOG00000003051	-	91	88.415	Propithecus_coquereli
ENSTSYG00000004355	-	92	88.619	ENSPVAG00000000297	NCL	92	88.619	Pteropus_vampyrus
ENSTSYG00000004355	-	92	77.410	ENSRNOG00000018273	Ncl	92	79.066	Rattus_norvegicus
ENSTSYG00000004355	-	67	97.232	ENSRBIG00000035396	-	89	95.302	Rhinopithecus_bieti
ENSTSYG00000004355	-	92	84.885	ENSRBIG00000037525	-	91	84.427	Rhinopithecus_bieti
ENSTSYG00000004355	-	99	85.935	ENSRROG00000036103	-	99	86.570	Rhinopithecus_roxellana
ENSTSYG00000004355	-	92	89.618	ENSRROG00000028756	-	95	98.221	Rhinopithecus_roxellana
ENSTSYG00000004355	-	53	97.361	ENSSBOG00000029193	-	92	88.584	Saimiri_boliviensis_boliviensis
ENSTSYG00000004355	-	56	74.886	ENSSBOG00000023094	-	84	75.113	Saimiri_boliviensis_boliviensis
ENSTSYG00000004355	-	73	88.391	ENSSBOG00000027549	-	91	80.793	Saimiri_boliviensis_boliviensis
ENSTSYG00000004355	-	92	86.078	ENSSSCG00000016275	NCL	92	86.228	Sus_scrofa
ENSTSYG00000004355	-	88	78.396	ENSTBEG00000001546	-	85	80.524	Tupaia_belangeri
ENSTSYG00000004355	-	73	75.795	ENSTBEG00000002469	-	66	80.571	Tupaia_belangeri
ENSTSYG00000004355	-	92	86.260	ENSTTRG00000009094	NCL	91	86.260	Tursiops_truncatus
ENSTSYG00000004355	-	67	96.579	ENSUAMG00000005639	NCL	80	96.834	Ursus_americanus
ENSTSYG00000004355	-	53	96.834	ENSUMAG00000015789	NCL	92	87.215	Ursus_maritimus
ENSTSYG00000004355	-	69	90.141	ENSVPAG00000001796	NCL	69	90.141	Vicugna_pacos
ENSTSYG00000004355	-	92	85.236	ENSVVUG00000025564	NCL	91	84.779	Vulpes_vulpes